A guide into glycosciences: How chemistry, biochemistry and biology cooperate to crack the sugar code

The most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of cellular glycoconjugates). How the ‘message’ encoded in carbohydrate ‘letters’ is ‘read’ and ‘translated’ can only be unraveled by interdiscip...

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Vydané v:Biochimica et biophysica acta Ročník 1850; číslo 1; s. 186 - 235
Hlavní autori: Solís, Dolores, Bovin, Nicolai V., Davis, Anthony P., Jiménez-Barbero, Jesús, Romero, Antonio, Roy, René, Smetana, Karel, Gabius, Hans-Joachim
Médium: Journal Article
Jazyk:English
Vydavateľské údaje: Netherlands Elsevier B.V 01.01.2015
Predmet:
Carbohydrate Conformation
Carbohydrate Sequence
Carbohydrates - chemistry
Conformer
Crystallography
Dendrimer
Glycan
glycoproteins
Glycoproteins - chemistry
Lectin
lectins
ligands
Models, Molecular
Molecular Sequence Data
Neoglycoconjugate
oligosaccharides
Oligosaccharides - chemistry
polysaccharides
Polysaccharides - chemistry
Protein Conformation
receptors
rendering
structure-activity relationships
surveys
synthesis
Lectin
Dendrimer
Conformer
Crystallography
Glycan
Neoglycoconjugate
ISSN:0304-4165, 0006-3002, 1872-8006
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Abstract The most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of cellular glycoconjugates). How the ‘message’ encoded in carbohydrate ‘letters’ is ‘read’ and ‘translated’ can only be unraveled by interdisciplinary efforts. This review provides a didactic step-by-step survey of the concept of the sugar code and the way strategic combination of experimental approaches characterizes structure–function relationships, with resources for teaching. The unsurpassed coding capacity of glycans is an ideal platform for generating a broad range of molecular ‘messages’. Structural and functional analyses of complex carbohydrates have been made possible by advances in chemical synthesis, rendering production of oligosaccharides, glycoclusters and neoglycoconjugates possible. This availability facilitates to test the glycans as ligands for natural sugar receptors (lectins). Their interaction is a means to turn sugar-encoded information into cellular effects. Glycan/lectin structures and their spatial modes of presentation underlie the exquisite specificity of the endogenous lectins in counterreceptor selection, that is, to home in on certain cellular glycoproteins or glycolipids. Understanding how sugar-encoded ‘messages’ are ‘read’ and ‘translated’ by lectins provides insights into fundamental mechanisms of life, with potential for medical applications. •The inherently interdisciplinary character of glycosciences is explained on an educational level.•Lectin structure and functionality are presented from synthetic receptors to clinically relevant human proteins.•Methods to study protein–glycan interactions are presented in a problem-oriented manner.
AbstractList The most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of cellular glycoconjugates). How the 'message' encoded in carbohydrate 'letters' is 'read' and 'translated' can only be unraveled by interdisciplinary efforts. This review provides a didactic step-by-step survey of the concept of the sugar code and the way strategic combination of experimental approaches characterizes structure-function relationships, with resources for teaching. The unsurpassed coding capacity of glycans is an ideal platform for generating a broad range of molecular 'messages'. Structural and functional analyses of complex carbohydrates have been made possible by advances in chemical synthesis, rendering production of oligosaccharides, glycoclusters and neoglycoconjugates possible. This availability facilitates to test the glycans as ligands for natural sugar receptors (lectins). Their interaction is a means to turn sugar-encoded information into cellular effects. Glycan/lectin structures and their spatial modes of presentation underlie the exquisite specificity of the endogenous lectins in counterreceptor selection, that is, to home in on certain cellular glycoproteins or glycolipids. Understanding how sugar-encoded 'messages' are 'read' and 'translated' by lectins provides insights into fundamental mechanisms of life, with potential for medical applications.
The most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of cellular glycoconjugates). How the ‘message’ encoded in carbohydrate ‘letters’ is ‘read’ and ‘translated’ can only be unraveled by interdisciplinary efforts. This review provides a didactic step-by-step survey of the concept of the sugar code and the way strategic combination of experimental approaches characterizes structure–function relationships, with resources for teaching. The unsurpassed coding capacity of glycans is an ideal platform for generating a broad range of molecular ‘messages’. Structural and functional analyses of complex carbohydrates have been made possible by advances in chemical synthesis, rendering production of oligosaccharides, glycoclusters and neoglycoconjugates possible. This availability facilitates to test the glycans as ligands for natural sugar receptors (lectins). Their interaction is a means to turn sugar-encoded information into cellular effects. Glycan/lectin structures and their spatial modes of presentation underlie the exquisite specificity of the endogenous lectins in counterreceptor selection, that is, to home in on certain cellular glycoproteins or glycolipids. Understanding how sugar-encoded ‘messages’ are ‘read’ and ‘translated’ by lectins provides insights into fundamental mechanisms of life, with potential for medical applications. •The inherently interdisciplinary character of glycosciences is explained on an educational level.•Lectin structure and functionality are presented from synthetic receptors to clinically relevant human proteins.•Methods to study protein–glycan interactions are presented in a problem-oriented manner.
The most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of cellular glycoconjugates). How the ‘message’ encoded in carbohydrate ‘letters’ is ‘read’ and ‘translated’ can only be unraveled by interdisciplinary efforts.This review provides a didactic step-by-step survey of the concept of the sugar code and the way strategic combination of experimental approaches characterizes structure–function relationships, with resources for teaching.The unsurpassed coding capacity of glycans is an ideal platform for generating a broad range of molecular ‘messages’. Structural and functional analyses of complex carbohydrates have been made possible by advances in chemical synthesis, rendering production of oligosaccharides, glycoclusters and neoglycoconjugates possible. This availability facilitates to test the glycans as ligands for natural sugar receptors (lectins). Their interaction is a means to turn sugar-encoded information into cellular effects. Glycan/lectin structures and their spatial modes of presentation underlie the exquisite specificity of the endogenous lectins in counterreceptor selection, that is, to home in on certain cellular glycoproteins or glycolipids.Understanding how sugar-encoded ‘messages’ are ‘read’ and ‘translated’ by lectins provides insights into fundamental mechanisms of life, with potential for medical applications.
The most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of cellular glycoconjugates). How the 'message' encoded in carbohydrate 'letters' is 'read' and 'translated' can only be unraveled by interdisciplinary efforts.BACKGROUNDThe most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of cellular glycoconjugates). How the 'message' encoded in carbohydrate 'letters' is 'read' and 'translated' can only be unraveled by interdisciplinary efforts.This review provides a didactic step-by-step survey of the concept of the sugar code and the way strategic combination of experimental approaches characterizes structure-function relationships, with resources for teaching.SCOPE OF REVIEWThis review provides a didactic step-by-step survey of the concept of the sugar code and the way strategic combination of experimental approaches characterizes structure-function relationships, with resources for teaching.The unsurpassed coding capacity of glycans is an ideal platform for generating a broad range of molecular 'messages'. Structural and functional analyses of complex carbohydrates have been made possible by advances in chemical synthesis, rendering production of oligosaccharides, glycoclusters and neoglycoconjugates possible. This availability facilitates to test the glycans as ligands for natural sugar receptors (lectins). Their interaction is a means to turn sugar-encoded information into cellular effects. Glycan/lectin structures and their spatial modes of presentation underlie the exquisite specificity of the endogenous lectins in counterreceptor selection, that is, to home in on certain cellular glycoproteins or glycolipids.MAJOR CONCLUSIONSThe unsurpassed coding capacity of glycans is an ideal platform for generating a broad range of molecular 'messages'. Structural and functional analyses of complex carbohydrates have been made possible by advances in chemical synthesis, rendering production of oligosaccharides, glycoclusters and neoglycoconjugates possible. This availability facilitates to test the glycans as ligands for natural sugar receptors (lectins). Their interaction is a means to turn sugar-encoded information into cellular effects. Glycan/lectin structures and their spatial modes of presentation underlie the exquisite specificity of the endogenous lectins in counterreceptor selection, that is, to home in on certain cellular glycoproteins or glycolipids.Understanding how sugar-encoded 'messages' are 'read' and 'translated' by lectins provides insights into fundamental mechanisms of life, with potential for medical applications.GENERAL SIGNIFICANCEUnderstanding how sugar-encoded 'messages' are 'read' and 'translated' by lectins provides insights into fundamental mechanisms of life, with potential for medical applications.
Author Bovin, Nicolai V.
Roy, René
Gabius, Hans-Joachim
Jiménez-Barbero, Jesús
Smetana, Karel
Solís, Dolores
Davis, Anthony P.
Romero, Antonio
Author_xml – sequence: 1
  givenname: Dolores
  surname: Solís
  fullname: Solís, Dolores
  email: d.solis@iqfr.csic.es
  organization: Instituto de Química Física “Rocasolano”, CSIC, Serrano 119, 28006 Madrid, Spain
– sequence: 2
  givenname: Nicolai V.
  surname: Bovin
  fullname: Bovin, Nicolai V.
  email: bovin@carb.ibch.ru
  organization: Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, ul Miklukho-Maklaya 16/10, 117871 GSP-7, V-437, Moscow, Russian Federation
– sequence: 3
  givenname: Anthony P.
  surname: Davis
  fullname: Davis, Anthony P.
  email: Anthony.Davis@bristol.ac.uk
  organization: School of Chemistry, University of Bristol, Cantock's Close, Bristol BS8 1TS, UK
– sequence: 4
  givenname: Jesús
  surname: Jiménez-Barbero
  fullname: Jiménez-Barbero, Jesús
  email: jjbarbero@cib.csic.es
  organization: Chemical and Physical Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu, 9, 28040 Madrid, Spain
– sequence: 5
  givenname: Antonio
  surname: Romero
  fullname: Romero, Antonio
  email: romero@cib.csic.es
  organization: Chemical and Physical Biology, Centro de Investigaciones Biológicas, CSIC, Ramiro de Maeztu, 9, 28040 Madrid, Spain
– sequence: 6
  givenname: René
  surname: Roy
  fullname: Roy, René
  email: roy.rene@uqam.ca
  organization: Department of Chemistry, Université du Québec à Montréal, P.O. Box 8888, Succ. Centre-Ville, Montréal, Québec H3C 3P8, Canada
– sequence: 7
  givenname: Karel
  surname: Smetana
  fullname: Smetana, Karel
  email: ksmet@lf1.cuni.cz
  organization: Charles University, 1st Faculty of Medicine, Institute of Anatomy, U nemocnice 3, 128 00 Prague 2, Czech Republic
– sequence: 8
  givenname: Hans-Joachim
  surname: Gabius
  fullname: Gabius, Hans-Joachim
  email: gabius@tiph.vetmed.uni-muenchen.de
  organization: Institute of Physiological Chemistry, Faculty of Veterinary Medicine, Ludwig-Maximilians-University Munich, Veterinärstr. 13, 80539 München, Germany
BackLink https://www.ncbi.nlm.nih.gov/pubmed/24685397$$D View this record in MEDLINE/PubMed
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Issue 1
Keywords Lectin
Dendrimer
Conformer
Crystallography
Glycan
Neoglycoconjugate
Language English
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Snippet The most demanding challenge in research on molecular aspects within the flow of biological information is posed by the complex carbohydrates (glycan part of...
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StartPage 186
SubjectTerms Carbohydrate Conformation
Carbohydrate Sequence
Carbohydrates - chemistry
Conformer
Crystallography
Dendrimer
Glycan
glycoproteins
Glycoproteins - chemistry
Lectin
lectins
ligands
Models, Molecular
Molecular Sequence Data
Neoglycoconjugate
oligosaccharides
Oligosaccharides - chemistry
polysaccharides
Polysaccharides - chemistry
Protein Conformation
receptors
rendering
structure-activity relationships
surveys
synthesis
Title A guide into glycosciences: How chemistry, biochemistry and biology cooperate to crack the sugar code
URI https://dx.doi.org/10.1016/j.bbagen.2014.03.016
https://www.ncbi.nlm.nih.gov/pubmed/24685397
https://www.proquest.com/docview/1642607548
https://www.proquest.com/docview/2000216364
Volume 1850
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