Colony geometry and structural complexity of the endangered species Acropora cervicornis partly explains the structure of their associated fish assemblage
In the past decade, significant efforts have been made to describe fish-habitat associations. However, most studies have oversimplified actual connections between fish assemblages and their habitats by using univariate correlations. The purpose of this study was to identify the features of habitat f...
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| Published in: | PeerJ (San Francisco, CA) Vol. 4; p. e1861 |
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| Language: | English |
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| ISSN: | 2167-8359, 2167-8359 |
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| Abstract | In the past decade, significant efforts have been made to describe fish-habitat associations. However, most studies have oversimplified actual connections between fish assemblages and their habitats by using univariate correlations. The purpose of this study was to identify the features of habitat forming corals that facilitate and influences assemblages of associated species such as fishes. For this we developed three-dimensional models of colonies of
Acropora cervicornis
to estimate geometry (length and height), structural complexity (i.e., volume, density of branches, etc.) and biological features of the colonies (i.e., live coral tissue, algae). We then correlated these colony characteristics with the associated fish assemblage using multivariate analyses. We found that geometry and complexity were better predictors of the structure of fish community, compared to other variables such as percentage of live coral tissue or algae. Combined, the geometry of each colony explained 40% of the variability of the fish assemblage structure associated with this coral species; 61% of the abundance and 69% of fish richness, respectively. Our study shows that three-dimensional reconstructions of discrete colonies of
Acropora cervicornis
provides a useful description of the colonial structural complexity and may explain a great deal of the variance in the structure of the associated coral reef fish community. This demonstration of the strongly trait-dependent ecosystem role of this threatened species has important implications for restoration and conservation efforts. |
|---|---|
| AbstractList | In the past decade, significant efforts have been made to describe fish-habitat associations. However, most studies have oversimplified actual connections between fish assemblages and their habitats by using univariate correlations. The purpose of this study was to identify the features of habitat forming corals that facilitate and influences assemblages of associated species such as fishes. For this we developed three-dimensional models of colonies of Acropora cervicornis to estimate geometry (length and height), structural complexity (i.e., volume, density of branches, etc.) and biological features of the colonies (i.e., live coral tissue, algae). We then correlated these colony characteristics with the associated fish assemblage using multivariate analyses. We found that geometry and complexity were better predictors of the structure of fish community, compared to other variables such as percentage of live coral tissue or algae. Combined, the geometry of each colony explained 40% of the variability of the fish assemblage structure associated with this coral species; 61% of the abundance and 69% of fish richness, respectively. Our study shows that three-dimensional reconstructions of discrete colonies of Acropora cervicornis provides a useful description of the colonial structural complexity and may explain a great deal of the variance in the structure of the associated coral reef fish community. This demonstration of the strongly trait-dependent ecosystem role of this threatened species has important implications for restoration and conservation efforts. In the past decade, significant efforts have been made to describe fish-habitat associations. However, most studies have oversimplified actual connections between fish assemblages and their habitats by using univariate correlations. The purpose of this study was to identify the features of habitat forming corals that facilitate and influences assemblages of associated species such as fishes. For this we developed three-dimensional models of colonies of Acropora cervicornis to estimate geometry (length and height), structural complexity (i.e., volume, density of branches, etc.) and biological features of the colonies (i.e., live coral tissue, algae). We then correlated these colony characteristics with the associated fish assemblage using multivariate analyses. We found that geometry and complexity were better predictors of the structure of fish community, compared to other variables such as percentage of live coral tissue or algae. Combined, the geometry of each colony explained 40% of the variability of the fish assemblage structure associated with this coral species; 61% of the abundance and 69% of fish richness, respectively. Our study shows that three-dimensional reconstructions of discrete colonies of Acropora cervicornis provides a useful description of the colonial structural complexity and may explain a great deal of the variance in the structure of the associated coral reef fish community. This demonstration of the strongly trait-dependent ecosystem role of this threatened species has important implications for restoration and conservation efforts. |
| ArticleNumber | e1861 |
| Audience | Academic |
| Author | Agudo-Adriani, Esteban A. Cavada-Blanco, Francoise Croquer, Aldo Cappelletto, Jose |
| Author_xml | – sequence: 1 givenname: Esteban A. surname: Agudo-Adriani fullname: Agudo-Adriani, Esteban A. organization: Laboratorio de Ecología Experimental, Departamento de Estudios Ambientales, Universidad Simón Bolivar, Caracas, Venezuela – sequence: 2 givenname: Jose surname: Cappelletto fullname: Cappelletto, Jose organization: Grupo de Investigación y Desarrollo en Mecatrónica, Departamento de Electrónica y Circuítos, Universidad Simón Bolivar, Caracas, Venezuela – sequence: 3 givenname: Francoise surname: Cavada-Blanco fullname: Cavada-Blanco, Francoise organization: Laboratorio de Conservación Marino-Costera, Departamento de Estudios Ambientales, Universidad Simón Bolivar, Caracas, Venezuela – sequence: 4 givenname: Aldo surname: Croquer fullname: Croquer, Aldo organization: Laboratorio de Ecología Experimental, Departamento de Estudios Ambientales, Universidad Simón Bolivar, Caracas, Venezuela |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/27069801$$D View this record in MEDLINE/PubMed |
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| Cites_doi | 10.1371/journal.pone.0083178 10.1007/s003380050063 10.1002/ece3.321 10.2307/1937508 10.1002/aqc.2374 10.1111/2041-210X.12331 10.2307/1444051 10.1007/s00338-008-0405-4 10.1007/s10021-012-9625-0 10.7717/peerj.1077 10.1111/j.0022-1112.2005.00629.x 10.5343/bms.2011.1143 10.1111/j.1523-1739.2008.00933.x 10.1016/S0921-8009(99)00009-9 10.5479/si.00775630.153.1 10.1016/S0169-5347(02)00045-9 10.1016/S0022-0981(97)00164-0 10.1016/j.jembe.2007.06.021 10.1890/0012-9658(2002)083[2855:CFSSCD]2.0.CO;2 10.1098/rspb.2009.0339 10.1371/journal.pone.0010835 10.3354/meps181081 10.1023/A:1011609617330 10.1007/PL00008826 10.1007/s00338-001-0209-2 10.2112/SI53-005.1 10.1023/A:1026217201408 10.3354/esr00667 10.1007/s11263-007-0107-3 10.1890/0012-9615(1999)069[0001:DBRATM]2.0.CO;2 10.2307/2265509 10.1007/s00338-010-0648-8 10.1669/0883-1351(2001)016¡0195:APATCO¿2.0.CO;2 10.1109/2945.817351 10.1007/s10641-007-9201-1 10.1890/0012-9658(2001)082[0290:FMMTCD]2.0.CO;2 10.1016/j.geomorph.2012.08.021 10.1371/journal.pone.0057386 10.1111/j.1365-2656.2007.01341.x 10.1525/bio.2011.61.10.8 10.1006/ecss.2000.0617 10.1007/BF00008254 10.1007/s003380100157 10.3354/meps008053 10.2307/1942506 10.1016/j.cageo.2005.11.009 10.1371/journal.pone.0042167 10.3354/meps07427 10.1007/PL00008841 10.3354/meps112087 10.2307/1941404 10.1126/science.1159196 10.3354/meps015265 10.1111/1365-2435.12528 10.1007/978-94-007-0114-4_9 10.5479/si.00775630.496-29.530 10.1007/BF00002200 10.1016/j.biocon.2008.09.020 10.1016/S0169-5347(00)01948-0 10.3354/meps041001 10.5194/isprsarchives-XL-5-W5-61-2015 10.2307/1932254 10.1007/BF00455026 10.1007/s00338-012-0920-1 10.3390/rs8020118 10.1371/journal.pone.0038450 10.1007/s00338-012-0984-y 10.1007/s00442-005-0144-y 10.1890/13-1315.1 10.1023/A:1007445226928 10.1038/nature02691 10.1007/BF00008211 10.1007/s10641-012-0021-6 |
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| Keywords | 3-D reconstructions Fish assemblages Acropora cervicornis Structural complexity |
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| References | Hughes (10.7717/peerj.1861/ref-52) 1994; 265 Chapman (10.7717/peerj.1861/ref-26) 1999; 181 Stella (10.7717/peerj.1861/ref-92) 2010; 29 Angelini (10.7717/peerj.1861/ref-3) 2011; 61 Aronson (10.7717/peerj.1861/ref-5) 2001; 16 Victor (10.7717/peerj.1861/ref-94) 1986; 56 Wu (10.7717/peerj.1861/ref-101) 2013 Reese (10.7717/peerj.1861/ref-83) 1981; 31 Weil (10.7717/peerj.1861/ref-97) 2002 Garpe (10.7717/peerj.1861/ref-41) 2003; 498 Allemand (10.7717/peerj.1861/ref-1) 2011 MacArthur (10.7717/peerj.1861/ref-63) 1961; 42 Garrison (10.7717/peerj.1861/ref-40) 2008; 141 Forrester (10.7717/peerj.1861/ref-38) 2014; 24 Nash (10.7717/peerj.1861/ref-74) 2013; 16 Robertson (10.7717/peerj.1861/ref-87) 1980; 30 Hill (10.7717/peerj.1861/ref-48) 2004 National Marine Fisheries Service (10.7717/peerj.1861/ref-75) 2014 Wilson (10.7717/peerj.1861/ref-99) 2008; 77 Holbrook (10.7717/peerj.1861/ref-51) 2002; 83 Bruno (10.7717/peerj.1861/ref-14) 2000; 122 Birkeland (10.7717/peerj.1861/ref-10) 1981; 1 Gullström (10.7717/peerj.1861/ref-45) 2008; 363 Mumby (10.7717/peerj.1861/ref-71) 2008; 22 Moberg (10.7717/peerj.1861/ref-70) 1999; 29 Snavely (10.7717/peerj.1861/ref-90) 2008; 80 Bulleri (10.7717/peerj.1861/ref-16) 2016; 30 Bruno (10.7717/peerj.1861/ref-15) 2003; 18 Lohr (10.7717/peerj.1861/ref-60) 2015; 27 Burns (10.7717/peerj.1861/ref-19) 2015; 3 Kohler (10.7717/peerj.1861/ref-54) 2006; 32 Lirman (10.7717/peerj.1861/ref-59) 1999; 65 Wu (10.7717/peerj.1861/ref-100) 2011 Risk (10.7717/peerj.1861/ref-84) 1971; 153 Alvarez-Filip (10.7717/peerj.1861/ref-2) 2009; 276 Sammarco (10.7717/peerj.1861/ref-89) 1982; 8 Done (10.7717/peerj.1861/ref-33) 1992; 247 McKinnon (10.7717/peerj.1861/ref-67) 2011; 11 Pratchett (10.7717/peerj.1861/ref-80) 2012; 2 (10.7717/peerj.1861/ref-18) 2015; XL-5/W5 Clarke (10.7717/peerj.1861/ref-29) 2006 Ferreira (10.7717/peerj.1861/ref-36) 2001; 61 Nyström (10.7717/peerj.1861/ref-77) 2000; 15 Chong-Seng (10.7717/peerj.1861/ref-27) 2012; 7 Graham (10.7717/peerj.1861/ref-43) 2013; 16 Herlan (10.7717/peerj.1861/ref-47) 2008 Graham (10.7717/peerj.1861/ref-42) 2012; 32 (10.7717/peerj.1861/ref-12) 2015 Precht (10.7717/peerj.1861/ref-82) 2010; 5 Gratwicke (10.7717/peerj.1861/ref-44) 2005; 66 Holbrook (10.7717/peerj.1861/ref-50) 2000; 122 Ménard (10.7717/peerj.1861/ref-69) 2012; 7 Bellwood (10.7717/peerj.1861/ref-8) 2004; 429 Dustan (10.7717/peerj.1861/ref-35) 2013; 8 Stella (10.7717/peerj.1861/ref-93) 2011; 49 Young (10.7717/peerj.1861/ref-102) 2012; 88 Coni (10.7717/peerj.1861/ref-31) 2012; 96 Dominici-Arosema (10.7717/peerj.1861/ref-34) 2005; 41 Walker (10.7717/peerj.1861/ref-95) 2009; 10053 Jackson (10.7717/peerj.1861/ref-53) 2014 Lavy (10.7717/peerj.1861/ref-57) 2015; 6 Legendre (10.7717/peerj.1861/ref-58) 1999; 69 Sogard (10.7717/peerj.1861/ref-91) 1997; 60 Courtney (10.7717/peerj.1861/ref-32) 2007; 351 Bouchon-Navaro (10.7717/peerj.1861/ref-11) 1989; 25 Werner (10.7717/peerj.1861/ref-98) 1983; 64 Chabanet (10.7717/peerj.1861/ref-25) 1997; 16 Coker (10.7717/peerj.1861/ref-30) 2012; 31 Hedley (10.7717/peerj.1861/ref-46) 2016; 8 Robertson (10.7717/peerj.1861/ref-86) 1996; 77 Precht (10.7717/peerj.1861/ref-81) 2002; 21 Bythell (10.7717/peerj.1861/ref-20) 2001; 20 Nash (10.7717/peerj.1861/ref-73) 2014; 95 McArdle (10.7717/peerj.1861/ref-64) 2001; 82 Mumby (10.7717/peerj.1861/ref-72) 2014 Posada (10.7717/peerj.1861/ref-79) 2003; 496 Bruno (10.7717/peerj.1861/ref-13) 2001; 413 Roberts (10.7717/peerj.1861/ref-85) 1987; 41 Cignoni (10.7717/peerj.1861/ref-28) 2008; 73 Laforsch (10.7717/peerj.1861/ref-56) 2008; 27 Luckhurst (10.7717/peerj.1861/ref-62) 1978; 49 Burke (10.7717/peerj.1861/ref-17) 2011 Komyakova (10.7717/peerj.1861/ref-55) 2013; 8 Westoby (10.7717/peerj.1861/ref-96) 2012; 179 Negelkerken (10.7717/peerj.1861/ref-76) 2000; 51 Carpenter (10.7717/peerj.1861/ref-22) 1981 Ceccarelli (10.7717/peerj.1861/ref-24) 2005; 145 Figueira (10.7717/peerj.1861/ref-37) 2008; 81 Sale (10.7717/peerj.1861/ref-88) 1984; 65 Carpenter (10.7717/peerj.1861/ref-23) 2008; 321 Aronson (10.7717/peerj.1861/ref-4) 2008 Friedlander (10.7717/peerj.1861/ref-39) 1998; 224 Bernardini (10.7717/peerj.1861/ref-9) 1999; 5 López-Ordaz (10.7717/peerj.1861/ref-61) 2010; 58 Ohman (10.7717/peerj.1861/ref-78) 1998; 53 (10.7717/peerj.1861/ref-21) 2001 McManus (10.7717/peerj.1861/ref-68) 1981; 2 Bell (10.7717/peerj.1861/ref-7) 1984; 15 McGehee (10.7717/peerj.1861/ref-66) 1995; 44 Ault (10.7717/peerj.1861/ref-6) 1998; 68 McCormick (10.7717/peerj.1861/ref-65) 1994; 112 Hixon (10.7717/peerj.1861/ref-49) 1989; 44 |
| References_xml | – volume: 8 start-page: e83178 year: 2013 ident: 10.7717/peerj.1861/ref-55 article-title: Relative importance of coral cover, habitat complexity and diversity in determining the structure of reef fish communities publication-title: PLoS ONE doi: 10.1371/journal.pone.0083178 – year: 2011 ident: 10.7717/peerj.1861/ref-100 article-title: SiftGPU: a GPU implementation of scale invariant feature transform (SIFT)(2007) – volume: 65 start-page: 235 year: 1999 ident: 10.7717/peerj.1861/ref-59 article-title: Reef fish communities associated with Acropora Palmata: relationship to benthic attributes publication-title: Bulletin of Marine Science – volume: 30 start-page: 187 year: 1980 ident: 10.7717/peerj.1861/ref-87 article-title: Spatial distribution patterns and coexistence of a group of territorial damselfish from The Great Barrier Reef publication-title: Bulletin of Marine Science – volume: 16 start-page: 93 year: 1997 ident: 10.7717/peerj.1861/ref-25 article-title: Relationships between coral reef substrata and fish publication-title: Coral Reefs doi: 10.1007/s003380050063 – volume: 2 start-page: 2168 issue: 9 year: 2012 ident: 10.7717/peerj.1861/ref-80 article-title: Specialization in habitat use by coral reef damselfishes and their susceptibility to habitat loss publication-title: Ecology and Evolution doi: 10.1002/ece3.321 – volume-title: Risk at risk revisited year: 2011 ident: 10.7717/peerj.1861/ref-17 – volume: 64 start-page: 1540 issue: 6 year: 1983 ident: 10.7717/peerj.1861/ref-98 article-title: An experimental test of the effect of predation risk on habitat use in fish publication-title: Ecology doi: 10.2307/1937508 – volume: 24 start-page: 81 issue: 1 year: 2014 ident: 10.7717/peerj.1861/ref-38 article-title: Long-term survival and colony growth of Acropora palmata fragments transplanted by volunteers for restoration publication-title: Aquatic Conservation: Marine and Freshwater Ecosystems doi: 10.1002/aqc.2374 – volume: 6 start-page: 521 issue: 5 year: 2015 ident: 10.7717/peerj.1861/ref-57 article-title: A quick, easy and non-intrusive method for underwater volume and surface area evaluation of benthic organisms by 3D computer modelling publication-title: Methods in Ecology and Evolution doi: 10.1111/2041-210X.12331 – volume: 1 start-page: 169 year: 1981 ident: 10.7717/peerj.1861/ref-10 article-title: Foraging behavior of two caribbean chaetodontids: Chaetodon capistratus and C. aculeatus publication-title: Copeia doi: 10.2307/1444051 – volume: 27 start-page: 811 year: 2008 ident: 10.7717/peerj.1861/ref-56 article-title: A precise and non-destructive method to calculate the surface area in living scleractinian corals using x-ray computed tomography and 3D modeling publication-title: Coral Reefs doi: 10.1007/s00338-008-0405-4 – volume: 16 start-page: 478 issue: 3 year: 2013 ident: 10.7717/peerj.1861/ref-43 article-title: Cross-scale habitat structure drives fish body size distributions on coral reefs publication-title: Ecosystem doi: 10.1007/s10021-012-9625-0 – volume: 3 start-page: e1077 year: 2015 ident: 10.7717/peerj.1861/ref-19 article-title: Integrating structure-from-motion photogrammetry with geospatial software as a novel technique for quantifying 3D ecological characteristics of coral reefs publication-title: PeerJ doi: 10.7717/peerj.1077 – volume: 66 start-page: 650 year: 2005 ident: 10.7717/peerj.1861/ref-44 article-title: The relationship between fish species richness, abundance and habitat complexity in a range of shallow tropical marine habitats publication-title: Journal of Fish doi: 10.1111/j.0022-1112.2005.00629.x – start-page: 117 volume-title: Methods for ecological monitoring of coral reefs year: 2004 ident: 10.7717/peerj.1861/ref-48 – volume: 88 start-page: 1075 issue: 4 year: 2012 ident: 10.7717/peerj.1861/ref-102 article-title: A review of reef restoration and coral propagation using the threatened genus Acropora in the Caribbean and Western Atlantic publication-title: Bulletin of Marine Science doi: 10.5343/bms.2011.1143 – year: 2008 ident: 10.7717/peerj.1861/ref-4 article-title: Acropora cervicornis. The IUCN Red List of Threatened Species 2008: e.T133381A3716457 – volume: 68 start-page: 25 issue: 1 year: 1998 ident: 10.7717/peerj.1861/ref-6 article-title: Spatial and temporally predictable fish communities on coral reefs publication-title: Ecological Monographs – start-page: 306 volume-title: Global Coral Reef Monitoring Network year: 2014 ident: 10.7717/peerj.1861/ref-53 article-title: Status and trends of Caribbean coral reefs? 1970–2012 – volume: 22 start-page: 941 issue: 4 year: 2008 ident: 10.7717/peerj.1861/ref-71 article-title: Coral reef habitats as surrogates of species, ecological functions, and ecosystem services publication-title: Conservation Biology doi: 10.1111/j.1523-1739.2008.00933.x – volume: 29 start-page: 215 year: 1999 ident: 10.7717/peerj.1861/ref-70 article-title: Ecological goods and services of coral reef ecosystems publication-title: Ecological Economics doi: 10.1016/S0921-8009(99)00009-9 – volume: 153 start-page: 1 year: 1971 ident: 10.7717/peerj.1861/ref-84 article-title: Fish diversity on a coral reef in The Virgin Islands publication-title: Atoll Research Bulletin doi: 10.5479/si.00775630.153.1 – volume: 18 start-page: 119 issue: 3 year: 2003 ident: 10.7717/peerj.1861/ref-15 article-title: Inclusion of facilitation into ecological theory publication-title: Trends in Ecology & Evolution doi: 10.1016/S0169-5347(02)00045-9 – volume: 16 start-page: 478 issue: 3 year: 2013 ident: 10.7717/peerj.1861/ref-74 article-title: Cross-scale habitat structure drives fish body size distributions on coral reefs publication-title: Ecosystems doi: 10.1007/s10021-012-9625-0 – start-page: 497 year: 1981 ident: 10.7717/peerj.1861/ref-22 article-title: The influence of substrate structure on the local abundance and diversity of Philippine Reef Fishes – volume: 224 start-page: 1 year: 1998 ident: 10.7717/peerj.1861/ref-39 article-title: Habitat characteristics affecting fish assemblages on a Hawaiian coral reef publication-title: Journal of Experimental Marine Biology and Ecology doi: 10.1016/S0022-0981(97)00164-0 – volume-title: Recovery Plan for Elkhorn (Acropora palmata) and Staghorn (A. cervicornis) Corals year: 2014 ident: 10.7717/peerj.1861/ref-75 – volume: 351 start-page: 234 year: 2007 ident: 10.7717/peerj.1861/ref-32 article-title: Estimating 3Dimensional colony surface area of field corals publication-title: Journal of Experimental Marine Biology and Ecology doi: 10.1016/j.jembe.2007.06.021 – volume: 83 start-page: 2855 year: 2002 ident: 10.7717/peerj.1861/ref-51 article-title: Competition for shelter space causes density-dependent predation mortality in damselfishes publication-title: Ecology doi: 10.1890/0012-9658(2002)083[2855:CFSSCD]2.0.CO;2 – volume: 276 start-page: 3019 year: 2009 ident: 10.7717/peerj.1861/ref-2 article-title: Flattening of Caribbean coral reefs: region-wide declines in architectural complexity publication-title: Proceedings of the Royal Society of Biological Sciences doi: 10.1098/rspb.2009.0339 – volume: 5 start-page: e10835 issue: 5 year: 2010 ident: 10.7717/peerj.1861/ref-82 article-title: Changing patterns of microhabitat utilization by the threespot damselfish, Stegastes planifrons, on Caribbean reefs publication-title: PLoS ONE doi: 10.1371/journal.pone.0010835 – volume: 181 start-page: 81 year: 1999 ident: 10.7717/peerj.1861/ref-26 article-title: Gradients in coral reef fish density and size across the Barbados Marine Reserve boundary: effects of reserve protection and habitat characteristics publication-title: Marine Ecology Progress Series doi: 10.3354/meps181081 – volume: 61 start-page: 353 year: 2001 ident: 10.7717/peerj.1861/ref-36 article-title: Community structure of fishes and habitat complexity on a tropical rocky shore publication-title: Environmental Biology of Fishes doi: 10.1023/A:1011609617330 – volume: 122 start-page: 109 year: 2000 ident: 10.7717/peerj.1861/ref-50 article-title: Spatial patterns in abundance of a damselfish reflect availability of suitable habitat publication-title: Oecologia doi: 10.1007/PL00008826 – volume: 21 start-page: 41 issue: 1 year: 2002 ident: 10.7717/peerj.1861/ref-81 article-title: Endangered acroporid corals of the Caribbean publication-title: Coral Reefs doi: 10.1007/s00338-001-0209-2 – volume: 10053 start-page: 39 year: 2009 ident: 10.7717/peerj.1861/ref-95 article-title: Relationship of reef fish assemblages and topographic complexity on Southeastern Florida coral reef habitats publication-title: Journal of Coastal Research doi: 10.2112/SI53-005.1 – volume: 498 start-page: 191 year: 2003 ident: 10.7717/peerj.1861/ref-41 article-title: Coral and fish distribution patterns in Mafia Island Marine Park, Tanzania: fish–habitat interactions publication-title: Hydrobiologia doi: 10.1023/A:1026217201408 – volume: 27 start-page: 243 issue: 3 year: 2015 ident: 10.7717/peerj.1861/ref-60 article-title: Optimizing the productivity of a coral nursery focused on staghorn coral Acropora cervicornis publication-title: Endangered Species Research doi: 10.3354/esr00667 – volume: 80 start-page: 189 year: 2008 ident: 10.7717/peerj.1861/ref-90 article-title: Modeling the world from internet photo collections publication-title: International Journal of Computer Vision doi: 10.1007/s11263-007-0107-3 – volume: 69 start-page: 1 year: 1999 ident: 10.7717/peerj.1861/ref-58 article-title: Distance-based redundancy analysis: testing multispecies responses in multifactorial ecological experiments publication-title: Ecological Monographs doi: 10.1890/0012-9615(1999)069[0001:DBRATM]2.0.CO;2 – volume: 77 start-page: 885 year: 1996 ident: 10.7717/peerj.1861/ref-86 article-title: Interspecific competition controls abundance and habitat use of territorial Caribbean damselfishes publication-title: Ecology doi: 10.2307/2265509 – volume: 29 start-page: 957 year: 2010 ident: 10.7717/peerj.1861/ref-92 article-title: Variation in the structure of epifaunal invertebrate assemblages among coral hosts publication-title: Coral Reefs doi: 10.1007/s00338-010-0648-8 – volume: 16 start-page: 195 issue: 3 year: 2001 ident: 10.7717/peerj.1861/ref-5 article-title: Applied paleoecology and the crisis on Caribbean coral reefs publication-title: Palaios doi: 10.1669/0883-1351(2001)016¡0195:APATCO¿2.0.CO;2 – volume: 5 start-page: 349 issue: 4 year: 1999 ident: 10.7717/peerj.1861/ref-9 article-title: The Ball-Pivoting algorithm for surface reconstruction publication-title: IEEE Transaction on Visualization and Computer Graphics doi: 10.1109/2945.817351 – volume: 49 start-page: 43 year: 2011 ident: 10.7717/peerj.1861/ref-93 article-title: Coral-associated invertebrates: diversity, ecological importance and vulnerability to disturbance publication-title: Oceanography and Marine Biology: An Annual Review – volume: 81 start-page: 297 issue: 3 year: 2008 ident: 10.7717/peerj.1861/ref-37 article-title: Small-scale demographic variability of the biocolor damselfish, Stegastes partitus, in the Florida Keys USA publication-title: Environmental Biology of Fishes doi: 10.1007/s10641-007-9201-1 – volume-title: PRIMER v6: User Manual/Tutorial year: 2006 ident: 10.7717/peerj.1861/ref-29 – volume: 82 start-page: 290 year: 2001 ident: 10.7717/peerj.1861/ref-64 article-title: Fitting multivariate models to community data: a comment on distance-based redundancy analysis publication-title: Ecology doi: 10.1890/0012-9658(2001)082[0290:FMMTCD]2.0.CO;2 – volume: 179 start-page: 300 year: 2012 ident: 10.7717/peerj.1861/ref-96 article-title: Structure-from-motion photogrammetry: a low-cost, effective tool for geoscience applications publication-title: Geomorphology doi: 10.1016/j.geomorph.2012.08.021 – volume: 2 start-page: 271 year: 1981 ident: 10.7717/peerj.1861/ref-68 article-title: Coral and fish community structure of Sombrero Island, Batangas, Philippines – volume: 8 start-page: 1 year: 2013 ident: 10.7717/peerj.1861/ref-35 article-title: Digital reef rugosity estimates coral reef habitat complexity publication-title: PLoS ONE doi: 10.1371/journal.pone.0057386 – volume: 77 start-page: 220 issue: 2 year: 2008 ident: 10.7717/peerj.1861/ref-99 article-title: Habitat utilization by coral reef fish: implications for specialists vs. generalists in a changing environment publication-title: Journal of Animal Ecology doi: 10.1111/j.1365-2656.2007.01341.x – volume: 61 start-page: 782 issue: 10 year: 2011 ident: 10.7717/peerj.1861/ref-3 article-title: Interactions among foundation species and their consequences for community organization, biodiversity, and conservation publication-title: BioScience doi: 10.1525/bio.2011.61.10.8 – volume-title: CARICOMP Methods manual, levels 1 and 2: manual of methods for mapping and monitoring of physical and biological parameters in the coastal zone of the Caribbean year: 2001 ident: 10.7717/peerj.1861/ref-21 – volume: 51 start-page: 31 year: 2000 ident: 10.7717/peerj.1861/ref-76 article-title: Importance of mangroves, seagrass beds and the shallow coral reef as a nursery for important coral reef fishes, using a visual census technique publication-title: Estuarine, Coastal and Shelf Science doi: 10.1006/ecss.2000.0617 – volume: 265 start-page: 1547 issue: 5178 year: 1994 ident: 10.7717/peerj.1861/ref-52 article-title: Catastrophes, phase shifts, and large-scale degradation of a Caribbean coral reef publication-title: Science-AAAS-Weekly Paper Edition – volume: 44 start-page: 393 issue: 4 year: 1995 ident: 10.7717/peerj.1861/ref-66 article-title: Juvenile settlement, survivorship and in situ growth rates of four species of Caribbean damselfishes in the genus Stegastes publication-title: Environmental Biology of Fishes doi: 10.1007/BF00008254 – volume: 31 start-page: 594 year: 1981 ident: 10.7717/peerj.1861/ref-83 article-title: Predation on corals by fishes of the Family Chaetodontidae: implication for conservation and management of Coral Reef Ecosystem publication-title: Bulletin of Marine Science – year: 2002 ident: 10.7717/peerj.1861/ref-97 article-title: Distribution and status of Acroporid coral (Scleractinia) populations in Puerto Rico – volume: 20 start-page: 193 year: 2001 ident: 10.7717/peerj.1861/ref-20 article-title: Three-dimensional morphometric measurements of reef corals using underwater photogrammetry techniques publication-title: Coral Reefs doi: 10.1007/s003380100157 – start-page: 1244 year: 2008 ident: 10.7717/peerj.1861/ref-47 article-title: Development of a coral nursery program for the threatened coral Acropora cervicornis in Florida – volume: 8 start-page: 53 year: 1982 ident: 10.7717/peerj.1861/ref-89 article-title: Damselfish territoriality: influence on diadema distribution and implications for coral community structure publication-title: Marine Ecology Progress Series doi: 10.3354/meps008053 – volume: 56 start-page: 145 issue: 2 year: 1986 ident: 10.7717/peerj.1861/ref-94 article-title: Larval settlement and juvenile mortality in a recruitment-limited coral reef fish population publication-title: Ecological Monographs doi: 10.2307/1942506 – volume: 32 start-page: 1259 year: 2006 ident: 10.7717/peerj.1861/ref-54 article-title: Coral Point Count with Excel extensions (CPCe): a Visual Basic program for the determination of coral and substrate coverage using random point count methodology publication-title: Computers and Geosciences doi: 10.1016/j.cageo.2005.11.009 – volume-title: Ecosystem services: from concept to practice year: 2015 ident: 10.7717/peerj.1861/ref-12 – year: 2013 ident: 10.7717/peerj.1861/ref-101 article-title: VisualSFM. Version. 0.5.22. USA – volume: 7 start-page: 1 year: 2012 ident: 10.7717/peerj.1861/ref-27 article-title: The influence of coral reef benthic condition on associated fish assemblages publication-title: PLoS ONE doi: 10.1371/journal.pone.0042167 – volume: 363 start-page: 241 year: 2008 ident: 10.7717/peerj.1861/ref-45 article-title: Seagrass structural complexity and landscape configuration as determinants of tropical fish assemblage composition publication-title: Marine Ecology Progress Series doi: 10.3354/meps07427 – volume: 44 start-page: 666 year: 1989 ident: 10.7717/peerj.1861/ref-49 article-title: Shelter characteristics and Caribbean fish assemblages: experiments with artificial reefs publication-title: Bulletin of Marine Science – volume: 122 start-page: 98 issue: 1 year: 2000 ident: 10.7717/peerj.1861/ref-14 article-title: Patch-size dependent habitat modification and facilitation on New England cobble beaches by Spartina alterniflora publication-title: Oecologia doi: 10.1007/PL00008841 – volume: 112 start-page: 87 year: 1994 ident: 10.7717/peerj.1861/ref-65 article-title: Comparison of field methods for measuring surface topography and their associations with a tropical reef fish assemblage publication-title: Marine Ecology Progress Series doi: 10.3354/meps112087 – volume: 65 start-page: 409 issue: 2 year: 1984 ident: 10.7717/peerj.1861/ref-88 article-title: Temporal variability in the community structure of fish on coral reef and the relation community structure to reef structure publication-title: Ecology doi: 10.2307/1941404 – volume: 11 start-page: 19 year: 2011 ident: 10.7717/peerj.1861/ref-67 article-title: Towards automated and in-situ, near-real time 3D reconstruction of coral reef environments – volume: 321 start-page: 560 issue: 5888 year: 2008 ident: 10.7717/peerj.1861/ref-23 article-title: One-third of reef-building corals face elevated extinction risk from climate change and local impacts publication-title: Science doi: 10.1126/science.1159196 – volume: 15 start-page: 265 year: 1984 ident: 10.7717/peerj.1861/ref-7 article-title: Influence of live coral cover on coral-reef fish communities publication-title: Marine Ecology Progress Series doi: 10.3354/meps015265 – volume: 30 start-page: 70 issue: 1 year: 2016 ident: 10.7717/peerj.1861/ref-16 article-title: Facilitation and the niche: implications for coexistence, range shifts and ecosystem functioning publication-title: Functional Ecology doi: 10.1111/1365-2435.12528 – start-page: 119 volume-title: Coral reefs: an ecosystem in transition year: 2011 ident: 10.7717/peerj.1861/ref-1 article-title: Coral calcification, cells to reefs doi: 10.1007/978-94-007-0114-4_9 – volume: 496 start-page: 530 year: 2003 ident: 10.7717/peerj.1861/ref-79 article-title: Rapid assessment of coral reefs in the Archipielago de los Roques National Park, Venezuela (Part 2: Fishes) publication-title: Atoll Research Bulletin doi: 10.5479/si.00775630.496-29.530 – volume: 25 start-page: 47 year: 1989 ident: 10.7717/peerj.1861/ref-11 article-title: Correlations between chaetodontid fishes and coral communities of the Gulf of Aqaba (Red Sea) publication-title: Environmental Biology of Fishes doi: 10.1007/BF00002200 – volume: 41 start-page: 613 issue: 3 year: 2005 ident: 10.7717/peerj.1861/ref-34 article-title: Reef fish community structure in the Tropical Eastern Pacific (Panamá): living on a relatively stable rocky reef environment publication-title: Caribbean Journal of Sciences – volume: 141 start-page: 3089 issue: 12 year: 2008 ident: 10.7717/peerj.1861/ref-40 article-title: Storm-generated coral fragments—a viable source of transplants for reef rehabilitation publication-title: Biological Conservation doi: 10.1016/j.biocon.2008.09.020 – volume: 58 start-page: 163 year: 2010 ident: 10.7717/peerj.1861/ref-61 article-title: Ictiofauna asociada a un arrecife somero en el Parque Nacional Morrocoy, Venezuela publication-title: Revista de Biología Tropical – volume: 15 start-page: 413 year: 2000 ident: 10.7717/peerj.1861/ref-77 article-title: Coral reef disturbance and resilience in a human-dominated environment publication-title: Trends in Ecology and Evolution doi: 10.1016/S0169-5347(00)01948-0 – volume: 41 start-page: 1 year: 1987 ident: 10.7717/peerj.1861/ref-85 article-title: Habitat complexity and coral reef fish diversity and abundance on Red Sea fringing reefs publication-title: Marine Ecology Progress Series doi: 10.3354/meps041001 – volume: XL-5/W5 start-page: 61 year: 2015 ident: 10.7717/peerj.1861/ref-18 article-title: Utilizing underwater three-dimensional modeling to enhance ecological and biological studies of coral reefs publication-title: ISPRS—International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences doi: 10.5194/isprsarchives-XL-5-W5-61-2015 – volume: 42 start-page: 594 issue: 3 year: 1961 ident: 10.7717/peerj.1861/ref-63 article-title: On bird species diversity publication-title: Ecology doi: 10.2307/1932254 – volume: 60 start-page: 1129 issue: 3 year: 1997 ident: 10.7717/peerj.1861/ref-91 article-title: Size selective mortality in the juvenile stages of teleost fishes: a review publication-title: Bulletin of Marine Science – volume: 49 start-page: 317 year: 1978 ident: 10.7717/peerj.1861/ref-62 article-title: Analysis of the influence of substrate variables on coral reef fish communities publication-title: Marine Biology doi: 10.1007/BF00455026 – volume: 31 start-page: 919 year: 2012 ident: 10.7717/peerj.1861/ref-30 article-title: Interactive effects of live coral and structural complexity on the recruitment of reef fishes publication-title: Coral Reefs doi: 10.1007/s00338-012-0920-1 – volume: 8 start-page: 118 issue: 2 year: 2016 ident: 10.7717/peerj.1861/ref-46 article-title: Remote sensing of coral reefs for monitoring and management: a review publication-title: Remote Sensing doi: 10.3390/rs8020118 – volume: 7 start-page: e38450 year: 2012 ident: 10.7717/peerj.1861/ref-69 article-title: Shelters and their use by fishes on fringing coral reefs publication-title: PLoS ONE doi: 10.1371/journal.pone.0038450 – volume: 32 start-page: 315 year: 2012 ident: 10.7717/peerj.1861/ref-42 article-title: The importance of structural complexity in coral reef ecosystems publication-title: Coral Reefs doi: 10.1007/s00338-012-0984-y – volume: 145 start-page: 445 year: 2005 ident: 10.7717/peerj.1861/ref-24 article-title: Foragers versus farmers: contrasting effects of two behavioural groups of herbivores on coral reefs publication-title: Oecologia doi: 10.1007/s00442-005-0144-y – volume: 95 start-page: 654 issue: 3 year: 2014 ident: 10.7717/peerj.1861/ref-73 article-title: Discontinuities, cross-scale patterns, and the organization of ecosystems publication-title: Ecology doi: 10.1890/13-1315.1 – volume: 53 start-page: 19 year: 1998 ident: 10.7717/peerj.1861/ref-78 article-title: Relationships between habitat structure and fish communities on coral and sandstones reefs publication-title: Environmental Biology of Fishes doi: 10.1023/A:1007445226928 – volume: 413 start-page: 201 year: 2001 ident: 10.7717/peerj.1861/ref-13 article-title: Habitat modification and facilitation in benthic marine communities publication-title: Marine Community Ecology – volume: 73 start-page: 6 issue: 45–46 year: 2008 ident: 10.7717/peerj.1861/ref-28 article-title: Meshlab: an open-source 3D mesh processing system publication-title: ERCIM News – volume: 429 start-page: 827 issue: 6994 year: 2004 ident: 10.7717/peerj.1861/ref-8 article-title: Confronting the coral reef crisis publication-title: Nature doi: 10.1038/nature02691 – volume-title: Towards reef resilience and sustainable livelihoods: a handbook for Caribbean reef managers year: 2014 ident: 10.7717/peerj.1861/ref-72 – volume: 247 start-page: 121 year: 1992 ident: 10.7717/peerj.1861/ref-33 article-title: Phase shifts in coral reef communities and their ecological significance publication-title: Hydrobiologia doi: 10.1007/BF00008211 – volume: 96 start-page: 45 year: 2012 ident: 10.7717/peerj.1861/ref-31 article-title: An evaluation of the use of branching fire-corals (Millepora spp.) as refuge by reef fish in the Abrolhos Bank, eastern Brazil publication-title: Environmental Biology of Fishes doi: 10.1007/s10641-012-0021-6 |
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| Title | Colony geometry and structural complexity of the endangered species Acropora cervicornis partly explains the structure of their associated fish assemblage |
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