Phylogenetic relationships of Iranian infectious hematopoietic necrosis virus of rainbow trout (Oncorhynchus mykiss) based on the glycoprotein gene

Infectious hematopoietic necrosis virus (IHNV), a member of family Rhabdoviridae and genus Novirhabdoviridae, causes a highly lethal disease of salmon and trout. In Iran IHNV was first detected in 2001 on farms rearing rainbow trout (Oncorhynchus mykiss). To evaluate the genetic relationships of IHN...

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Vydáno v:Archives of virology Ročník 161; číslo 3; s. 657 - 663
Hlavní autoři: Adel, Milad, Amiri, Alireza Babaalian, Dadar, Maryam, Breyta, Rachel, Kurath, Gael, Laktarashi, Bahram, Ghajari, Amrolah
Médium: Journal Article
Jazyk:angličtina
Vydáno: Vienna Springer Vienna 01.03.2016
Springer Nature B.V
Témata:
Animals
Biomedical and Life Sciences
Biomedicine
Brief Report
Cluster Analysis
Disease
Epidemics
Europe
farms
Fish Diseases - virology
fish eggs
Fish hatcheries
Fisheries
Genes
genetic relationships
Genetic Variation
Genomes
Genotype
Glycoproteins
Glycoproteins - genetics
Infectious Diseases
Infectious hematopoietic necrosis virus
Infectious hematopoietic necrosis virus - classification
Infectious hematopoietic necrosis virus - genetics
Infectious hematopoietic necrosis virus - isolation & purification
Iran
Medical Microbiology
Molecular Sequence Data
Oncorhynchus mykiss
Oncorhynchus mykiss - virology
Phylogenetics
Phylogeny
Proteins
rearing
Rhabdoviridae
Rhabdoviridae Infections - virology
RNA, Viral - genetics
Salmon
Sequence Analysis, DNA
Sequence Homology
Trout
Viral Proteins - genetics
Virology
Viruses
Iran
Europe
United States > US
Asia
North America
Japan
ISW, Iran
ANE, Europe
Infectious hematopoietic necrosis virus
IHNV phylogenetics
IHNV genogroup E
Iran fish disease
IHNV
Iran fish virus
Iranian virus strains
Iran trout culture
Fish virus phylogeny
ISSN:0304-8608, 1432-8798, 1432-8798
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Shrnutí:Infectious hematopoietic necrosis virus (IHNV), a member of family Rhabdoviridae and genus Novirhabdoviridae, causes a highly lethal disease of salmon and trout. In Iran IHNV was first detected in 2001 on farms rearing rainbow trout (Oncorhynchus mykiss). To evaluate the genetic relationships of IHNV from northern and western Iran, the sequences of a 651-nt region of the glycoprotein gene were determined for two Iranian isolates. These sequences were analyzed to evaluate their genetic relatedness to worldwide isolates representing the five known genogroups of IHNV. Iranian isolates were most closely related to European isolates within the genogroup E rather than those of North American genogroups U, M and L, or the Asian genogroup J. It appears that Iranian IHNV was most likely introduced to Iran from a source in Europe by the movement of contaminated fish eggs.
Bibliografie:http://dx.doi.org/10.1007/s00705-015-2684-8
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ISSN:0304-8608
1432-8798
1432-8798
DOI:10.1007/s00705-015-2684-8