Molecular analysis of the VP7 gene of pheasant rotaviruses identifies a new genotype, designated G23

Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genom...

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Vydáno v:	Archives of virology Ročník 154; číslo 8; s. 1365 - 1369
Hlavní autoři:	Ursu, Krisztina, Kisfali, Péter, Rigó, Dóra, Ivanics, Éva, Erdélyi, Károly, Dán, Ádám, Melegh, Béla, Martella, Vito, Bányai, Krisztián
Médium:	Journal Article
Jazyk:	angličtina
Vydáno:	Vienna Springer Vienna 01.08.2009 Springer Springer Nature B.V
Témata:	Amino Acid Sequence Animals Antigens Antigens, Viral Antigens, Viral - genetics Biological and medical sciences Biomedical and Life Sciences Biomedicine Bird Diseases Bird Diseases - virology Brief Report Capsid Proteins Capsid Proteins - genetics classification enteritis Fundamental and applied biological sciences. Psychology Galliformes Galliformes - virology Genes Genes, Viral genetics Genome, Viral Genomes genotype Genotype & phenotype Hungary Infectious Diseases mammals Medical Microbiology Microbiology Miscellaneous Molecular Sequence Data open reading frames Phasianidae pheasants Rotavirus Rotavirus - classification Rotavirus - genetics Rotavirus Infections Rotavirus Infections - veterinary Rotavirus Infections - virology Sequence Homology, Amino Acid veterinary Virology Viruses Wildfowl Hungary Gene Sequencing Strategy Avian Strain Case Submission Virological Examination Serotype Specificity Virus Vertebrata Pheasant Gene Rotavirus Genotype Identification Aves Reoviridae
ISSN:	0304-8608, 1432-8798, 1432-8798
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Abstract	Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genome segment was 1,070 bp long, while the open reading frame was predicted to encode a 330-aa-long protein. The nucleotide sequence identities among the three pheasant rotavirus strains were high (≥94%), whereas the range of nucleotide sequence identities to other avian and mammalian rotavirus VP7 genes fell between 68 and 73% and between 60 and 66%, respectively. Our findings indicate that these Hungarian pheasant rotaviruses need to be considered representatives of a new VP7 genotype specificity, designated G23.
AbstractList	Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genome segment was 1,070 bp long, while the open reading frame was predicted to encode a 330-aa-long protein. The nucleotide sequence identities among the three pheasant rotavirus strains were high (≥94%), whereas the range of nucleotide sequence identities to other avian and mammalian rotavirus VP7 genes fell between 68 and 73% and between 60 and 66%, respectively. Our findings indicate that these Hungarian pheasant rotaviruses need to be considered representatives of a new VP7 genotype specificity, designated G23. Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genome segment was 1,070bp long, while the open reading frame was predicted to encode a 330-aa-long protein. The nucleotide sequence identities among the three pheasant rotavirus strains were high (.94%), whereas the range of nucleotide sequence identities to other avian and mammalian rotavirus VP7 genes fell between 68 and 73% and between 60 and 66%, respectively. Our findings indicate that these Hungarian pheasant rotaviruses need to be considered representatives of a new VP7 genotype specificity, designated G23. Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genome segment was 1,070 bp long, while the open reading frame was predicted to encode a 330-aa-long protein. The nucleotide sequence identities among the three pheasant rotavirus strains were high (> or =94%), whereas the range of nucleotide sequence identities to other avian and mammalian rotavirus VP7 genes fell between 68 and 73% and between 60 and 66%, respectively. Our findings indicate that these Hungarian pheasant rotaviruses need to be considered representatives of a new VP7 genotype specificity, designated G23. Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genome segment was 1,070 bp long, while the open reading frame was predicted to encode a 330-aa-long protein. The nucleotide sequence identities among the three pheasant rotavirus strains were high (> or =94%), whereas the range of nucleotide sequence identities to other avian and mammalian rotavirus VP7 genes fell between 68 and 73% and between 60 and 66%, respectively. Our findings indicate that these Hungarian pheasant rotaviruses need to be considered representatives of a new VP7 genotype specificity, designated G23.Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genome segment was 1,070 bp long, while the open reading frame was predicted to encode a 330-aa-long protein. The nucleotide sequence identities among the three pheasant rotavirus strains were high (> or =94%), whereas the range of nucleotide sequence identities to other avian and mammalian rotavirus VP7 genes fell between 68 and 73% and between 60 and 66%, respectively. Our findings indicate that these Hungarian pheasant rotaviruses need to be considered representatives of a new VP7 genotype specificity, designated G23. Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genome segment was 1,070 bp long, while the open reading frame was predicted to encode a 330-aa-long protein. The nucleotide sequence identities among the three pheasant rotavirus strains were high (>=94%), whereas the range of nucleotide sequence identities to other avian and mammalian rotavirus VP7 genes fell between 68 and 73% and between 60 and 66%, respectively. Our findings indicate that these Hungarian pheasant rotaviruses need to be considered representatives of a new VP7 genotype specificity, designated G23. Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this study, we sequenced the VP7-encoding genome segment of three pheasant rotavirus strains detected during 2008 in Hungary. The full-length genome segment was 1,070 bp long, while the open reading frame was predicted to encode a 330-aa-long protein. The nucleotide sequence identities among the three pheasant rotavirus strains were high (≥94%), whereas the range of nucleotide sequence identities to other avian and mammalian rotavirus VP7 genes fell between 68 and 73% and between 60 and 66%, respectively. Our findings indicate that these Hungarian pheasant rotaviruses need to be considered representatives of a new VP7 genotype specificity, designated G23.
Author	Rigó, Dóra Dán, Ádám Bányai, Krisztián Kisfali, Péter Martella, Vito Erdélyi, Károly Ivanics, Éva Ursu, Krisztina Melegh, Béla
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Keywords	Gene Sequencing Strategy Avian Strain Case Submission Virological Examination Serotype Specificity Virus Vertebrata Pheasant Gene Rotavirus Genotype Identification Aves Reoviridae
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References_xml	– volume: 153 start-page: 1621 year: 2008 end-page: 1629 ident: CR11 article-title: Recommendations for the classification of group A rotaviruses using all 11 genomic RNA segments publication-title: Arch Virol doi: 10.1007/s00705-008-0155-1 – volume: 100 start-page: 481 year: 1988 end-page: 492 ident: CR13 article-title: Isolation and characterization of rotavirus from feral pigeon in mammalian cell cultures publication-title: Epidemiol Infect doi: 10.1017/S0950268800067212 – start-page: 1787 year: 2001 end-page: 1833 ident: CR7 article-title: Rotaviruses publication-title: Fields virology – volume: 185 start-page: 853 year: 1991 end-page: 856 ident: CR14 article-title: Sequence of the VP7 gene of chicken rotavirus Ch2 strain of serotype 7 rotavirus publication-title: Virology doi: 10.1016/0042-6822(91)90558-S – start-page: 628 year: 1990 end-page: 635 ident: CR12 article-title: Rotavirus infections publication-title: Diseases of poultry – volume: 129 start-page: 227 year: 1993 end-page: 234 ident: CR8 article-title: The avian rotavirus Ty-1 Vp7 nucleotide and deduced amino acid sequences differ significantly from those of Ch-2 rotavirus publication-title: Arch Virol doi: 10.1007/BF01316897 – volume: 386 start-page: 334 year: 2009 end-page: 343 ident: CR16 article-title: Evidence of interspecies transmission and reassortment among avian group A rotaviruses publication-title: Virology doi: 10.1016/j.virol.2009.01.040 – volume: 1985 start-page: 499 issue: 29 year: 1985 end-page: 508 ident: CR17 article-title: Isolation and characterization of avian rotaviruses publication-title: Avian Dis doi: 10.2307/1590511 – volume: 82 start-page: 3204 year: 2008 end-page: 3219 ident: CR10 article-title: Full genome-based classification of rotaviruses reveals a common origin between human Wa-like and porcine rotavirus strains and human DS-1-like and bovine rotavirus strains publication-title: J Virol doi: 10.1128/JVI.02257-07 – start-page: 1917 year: 2007 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Snippet	Rotavirus-associated enteritis has been reported in pheasants, but there is no information on the genetic/antigenic features of pheasant rotaviruses. In this...
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SubjectTerms	Amino Acid Sequence Animals Antigens Antigens, Viral Antigens, Viral - genetics Biological and medical sciences Biomedical and Life Sciences Biomedicine Bird Diseases Bird Diseases - virology Brief Report Capsid Proteins Capsid Proteins - genetics classification enteritis Fundamental and applied biological sciences. Psychology Galliformes Galliformes - virology Genes Genes, Viral genetics Genome, Viral Genomes genotype Genotype & phenotype Hungary Infectious Diseases mammals Medical Microbiology Microbiology Miscellaneous Molecular Sequence Data open reading frames Phasianidae pheasants Rotavirus Rotavirus - classification Rotavirus - genetics Rotavirus Infections Rotavirus Infections - veterinary Rotavirus Infections - virology Sequence Homology, Amino Acid veterinary Virology Viruses Wildfowl
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Title	Molecular analysis of the VP7 gene of pheasant rotaviruses identifies a new genotype, designated G23
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