Weighted minimizer sampling improves long read mapping

Abstract Motivation In this era of exponential data growth, minimizer sampling has become a standard algorithmic technique for rapid genome sequence comparison. This technique yields a sub-linear representation of sequences, enabling their comparison in reduced space and time. A key property of the...

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Bibliographic Details

Published in:	Bioinformatics (Oxford, England) Vol. 36; no. Supplement_1; pp. i111 - i118
Main Authors:	Jain, Chirag, Rhie, Arang, Zhang, Haowen, Chu, Claudia, Walenz, Brian P, Koren, Sergey, Phillippy, Adam M
Format:	Journal Article
Language:	English
Published:	England Oxford University Press 01.07.2020
Subjects:	Algorithms Comparative and Functional Genomics Data Compression Genomics High-Throughput Nucleotide Sequencing Humans Sequence Analysis, DNA Software
ISSN:	1367-4803, 1367-4811, 1367-4811
Online Access:	Get full text
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