SGN Sim, a Stochastic Genetic Networks Simulator

We present SGNSim, 'Stochastic Gene Networks Simulator', a tool to model gene regulatory networks (GRN) where transcription and translation are modeled as multiple time delayed events and its dynamics is driven by a stochastic simulation algorithm (SSA) able to deal with multiple time dela...

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Bibliographic Details
Published in:	Bioinformatics Vol. 23; no. 6; pp. 777 - 779
Main Authors:	Ribeiro, Andre S., Lloyd-Price, Jason
Format:	Journal Article
Language:	English
Published:	Oxford Oxford University Press 15.03.2007 Oxford Publishing Limited (England)
Subjects:	Algorithms Biological and medical sciences Chemical reactions Computer Simulation Fundamental and applied biological sciences. Psychology Gene Expression Regulation - genetics General aspects Mathematics in biology. Statistical analysis. Models. Metrology. Data processing in biology (general aspects) Models, Genetic Models, Statistical Protein Biosynthesis - genetics Proteome - genetics Signal Transduction - genetics Stochastic Processes Topology Transcription, Genetic - genetics Yeasts Compartmentalization Yeast Stochastic simulation Perturbation Gene expression Scope note Regulation(control) Chemical reaction Physical parameter Network Genetics Models Bioinformatics
ISSN:	1367-4803, 1367-4811, 1367-4811, 1460-2059
Online Access:	Get full text
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