Co-expression tools for plant biology: opportunities for hypothesis generation and caveats

Gene co-expression analysis has emerged in the past 5 years as a powerful tool for gene function prediction. In essence, co-expression analysis asks the question 'what are the genes that are co-expressed, that is, those that show similar expression profiles across many experiments, with my gene...

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Bibliographic Details
Published in:	Plant, cell and environment Vol. 32; no. 12; pp. 1633 - 1651
Main Authors:	USADEL, BJÖRN, OBAYASHI, TAKESHI, MUTWIL, MAREK, GIORGI, FEDERICO M, BASSEL, GEORGE W, TANIMOTO, MIMI, CHOW, AMANDA, STEINHAUSER, DIRK, PERSSON, STAFFAN, PROVART, NICHOLAS J
Format:	Journal Article
Language:	English
Published:	Oxford, UK Oxford, UK : Blackwell Publishing Ltd 01.12.2009 Blackwell Publishing Ltd Blackwell
Subjects:	Arabidopsis bioinformatics Biological and medical sciences Computational Biology correlation data collection Databases, Genetic Fundamental and applied biological sciences. Psychology gene expression Gene Expression Profiling Gene Expression Profiling - methods Gene Expression Profiling - statistics & numerical data genes Genes, Plant genetics methods Oligonucleotide Array Sequence Analysis Oligonucleotide Array Sequence Analysis - methods Oligonucleotide Array Sequence Analysis - statistics & numerical data plant biology Plants Plants - genetics prediction reverse genetics statistics & numerical data databases Correlation reverse genetics Arabidopsis Plant ecology Plant biology Arabidopsis thaliana Generation Cruciferae Dicotyledones Angiospermae Database Genetics Spermatophyta Experimental plant Bioinformatics
ISSN:	0140-7791, 1365-3040, 1365-3040
Online Access:	Get full text
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