Metagenomic Identification of Novel Eukaryotic Viruses with Small DNA Genomes in Pheasants

A panel of intestinal samples collected from common pheasants (Phasianus colchicus) between 2008 and 2017 was used for metagenomic investigation using an unbiased enrichment protocol and different bioinformatic pipelines. The number of sequence reads in the metagenomic analysis ranged from 1,419,265...

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Bibliographic Details
Published in:	Animals (Basel) Vol. 14; no. 2; p. 237
Main Authors:	Kaszab, Eszter, Bali, Krisztina, Marton, Szilvia, Ursu, Krisztina, Farkas, Szilvia L., Fehér, Enikő, Domán, Marianna, Martella, Vito, Bányai, Krisztián
Format:	Journal Article
Language:	English
Published:	Switzerland MDPI AG 01.01.2024
Subjects:	Analysis animal health bioinformatics Coronaviruses Disease prevention DNA Epidemiology Genetic testing genome genome assembly Genomes Genomics intestines metagenomics Open source software Orthocoronavirinae Parvoviridae Phasianus colchicus phylogenetic analysis Reoviridae RNA single-stranded DNA Virology virome Viruses Wildfowl Hungary virome phylogenetic analysis genome assembly
ISSN:	2076-2615, 2076-2615
Online Access:	Get full text
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