Decoding the Fundamental Drivers of Phylodynamic Inference

Abstract Despite its increasing role in the understanding of infectious disease transmission at the applied and theoretical levels, phylodynamics lacks a well-defined notion of ideal data and optimal sampling. We introduce a method to visualize and quantify the relative impact of pathogen genome seq...

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Bibliographic Details
Published in:	Molecular biology and evolution Vol. 40; no. 6
Main Authors:	Featherstone, Leo A, Duchene, Sebastian, Vaughan, Timothy G
Format:	Journal Article
Language:	English
Published:	US Oxford University Press 01.06.2023
Subjects:	Analysis Automobile drivers COVID-19 Development and progression Discoveries Disease control Disease transmission Epidemics Genomes Genomics Health aspects Infectious diseases Inference Influenza A Virus, H1N1 Subtype Markov analysis Medical research Medicine, Experimental Nucleotide sequence Pathogens Phylogenetics Phylogeny Sampling SARS-CoV-2 - genetics Severe acute respiratory syndrome coronavirus 2 Swine influenza Tradeoffs Viral diseases Australia Bayesian phylogenetics phylodynamics birth–death model
ISSN:	0737-4038, 1537-1719, 1537-1719
Online Access:	Get full text
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