A Novel Parvovirus Associated with the Whitefly Bemisia tabaci
The whitefly Bemisia tabaci (Hemiptera: Aleyrodoidea) causes direct feeding damage to crop plants and transmits pathogenic plant viruses, thereby threatening global food security. Although whitefly-infecting RNA viruses are known and proposed as biocontrol agents, no insect DNA virus has been found...
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| Veröffentlicht in: | Pathogens (Basel) Jg. 14; H. 7; S. 714 |
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| Abstract | The whitefly Bemisia tabaci (Hemiptera: Aleyrodoidea) causes direct feeding damage to crop plants and transmits pathogenic plant viruses, thereby threatening global food security. Although whitefly-infecting RNA viruses are known and proposed as biocontrol agents, no insect DNA virus has been found in any member of Aleyrodoidea. Using rolling circle amplification (RCA) of viral DNA from whiteflies collected from crop fields in Morocco, followed by Illumina sequencing of the RCA products, we found a novel insect single-stranded (ss) DNA parvovirus (family Parvoviridae) in addition to plant ssDNA geminiviruses transmitted by whiteflies. Based on its genome organization with inverted terminal repeats and evolutionarily conserved proteins mediating viral DNA replication (NS1/Rep) and encapsidation (VP), encoded on the forward and reverse strands, respectively, we named this virus Bemisia tabaci ambidensovirus (BtaDV) and classified it as a founding member of a new genus within the subfamily Densovirinae. This subfamily also contains three distinct genera of ambisense densoviruses of other hemipteran insects (Aphidoidea, Coccoidea, and Psylloidea). Furthermore, we provide evidence for the genetic variants of BtaDV circulating in whitefly populations and for its partial sequences integrated into the B. tabaci genome, with one integrant locus potentially expressing a fusion protein composed of viral Rep endonuclease and host DNA-binding domains. This suggests a long-term virus-host interaction and neofunctionalization of BtaDV-derived endogenous viral elements. |
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| AbstractList | The whitefly Bemisia tabaci (Hemiptera: Aleyrodoidea) causes direct feeding damage to crop plants and transmits pathogenic plant viruses, thereby threatening global food security. Although whitefly-infecting RNA viruses are known and proposed as biocontrol agents, no insect DNA virus has been found in any member of Aleyrodoidea. Using rolling circle amplification (RCA) of viral DNA from whiteflies collected from crop fields in Morocco, followed by Illumina sequencing of the RCA products, we found a novel insect single-stranded (ss) DNA parvovirus (family Parvoviridae) in addition to plant ssDNA geminiviruses transmitted by whiteflies. Based on its genome organization with inverted terminal repeats and evolutionarily conserved proteins mediating viral DNA replication (NS1/Rep) and encapsidation (VP), encoded on the forward and reverse strands, respectively, we named this virus Bemisia tabaci ambidensovirus (BtaDV) and classified it as a founding member of a new genus within the subfamily Densovirinae. This subfamily also contains three distinct genera of ambisense densoviruses of other hemipteran insects (Aphidoidea, Coccoidea, and Psylloidea). Furthermore, we provide evidence for the genetic variants of BtaDV circulating in whitefly populations and for its partial sequences integrated into the B. tabaci genome, with one integrant locus potentially expressing a fusion protein composed of viral Rep endonuclease and host DNA-binding domains. This suggests a long-term virus-host interaction and neofunctionalization of BtaDV-derived endogenous viral elements. The whitefly (Hemiptera: Aleyrodoidea) causes direct feeding damage to crop plants and transmits pathogenic plant viruses, thereby threatening global food security. Although whitefly-infecting RNA viruses are known and proposed as biocontrol agents, no insect DNA virus has been found in any member of Aleyrodoidea. Using rolling circle amplification (RCA) of viral DNA from whiteflies collected from crop fields in Morocco, followed by Illumina sequencing of the RCA products, we found a novel insect single-stranded (ss) DNA parvovirus (family in addition to plant ssDNA geminiviruses transmitted by whiteflies. Based on its genome organization with inverted terminal repeats and evolutionarily conserved proteins mediating viral DNA replication (NS1/Rep) and encapsidation (VP), encoded on the forward and reverse strands, respectively, we named this virus ambidensovirus (BtaDV) and classified it as a founding member of a new genus within the subfamily This subfamily also contains three distinct genera of ambisense densoviruses of other hemipteran insects (Aphidoidea, Coccoidea, and Psylloidea). Furthermore, we provide evidence for the genetic variants of BtaDV circulating in whitefly populations and for its partial sequences integrated into the genome, with one integrant locus potentially expressing a fusion protein composed of viral Rep endonuclease and host DNA-binding domains. This suggests a long-term virus-host interaction and neofunctionalization of BtaDV-derived endogenous viral elements. The whitefly Bemisia tabaci (Hemiptera: Aleyrodoidea) causes direct feeding damage to crop plants and transmits pathogenic plant viruses, thereby threatening global food security. Although whitefly-infecting RNA viruses are known and proposed as biocontrol agents, no insect DNA virus has been found in any member of Aleyrodoidea. Using rolling circle amplification (RCA) of viral DNA from whiteflies collected from crop fields in Morocco, followed by Illumina sequencing of the RCA products, we found a novel insect single-stranded (ss) DNA parvovirus (family Parvoviridae) in addition to plant ssDNA geminiviruses transmitted by whiteflies. Based on its genome organization with inverted terminal repeats and evolutionarily conserved proteins mediating viral DNA replication (NS1/Rep) and encapsidation (VP), encoded on the forward and reverse strands, respectively, we named this virus Bemisia tabaci ambidensovirus (BtaDV) and classified it as a founding member of a new genus within the subfamily Densovirinae. This subfamily also contains three distinct genera of ambisense densoviruses of other hemipteran insects (Aphidoidea, Coccoidea, and Psylloidea). Furthermore, we provide evidence for the genetic variants of BtaDV circulating in whitefly populations and for its partial sequences integrated into the B. tabaci genome, with one integrant locus potentially expressing a fusion protein composed of viral Rep endonuclease and host DNA-binding domains. This suggests a long-term virus-host interaction and neofunctionalization of BtaDV-derived endogenous viral elements.The whitefly Bemisia tabaci (Hemiptera: Aleyrodoidea) causes direct feeding damage to crop plants and transmits pathogenic plant viruses, thereby threatening global food security. Although whitefly-infecting RNA viruses are known and proposed as biocontrol agents, no insect DNA virus has been found in any member of Aleyrodoidea. Using rolling circle amplification (RCA) of viral DNA from whiteflies collected from crop fields in Morocco, followed by Illumina sequencing of the RCA products, we found a novel insect single-stranded (ss) DNA parvovirus (family Parvoviridae) in addition to plant ssDNA geminiviruses transmitted by whiteflies. Based on its genome organization with inverted terminal repeats and evolutionarily conserved proteins mediating viral DNA replication (NS1/Rep) and encapsidation (VP), encoded on the forward and reverse strands, respectively, we named this virus Bemisia tabaci ambidensovirus (BtaDV) and classified it as a founding member of a new genus within the subfamily Densovirinae. This subfamily also contains three distinct genera of ambisense densoviruses of other hemipteran insects (Aphidoidea, Coccoidea, and Psylloidea). Furthermore, we provide evidence for the genetic variants of BtaDV circulating in whitefly populations and for its partial sequences integrated into the B. tabaci genome, with one integrant locus potentially expressing a fusion protein composed of viral Rep endonuclease and host DNA-binding domains. This suggests a long-term virus-host interaction and neofunctionalization of BtaDV-derived endogenous viral elements. |
| Audience | Academic |
| Author | Pooggin, Mikhail M. Belabess, Zineb Peterschmitt, Michel Gousi, Fani Laboureau, Nathalie |
| AuthorAffiliation | 1 PHIM Plant Health Institute, University of Montpellier, INRAE, CIRAD, IRD, Institute Agro, 34398 Montpellier, France; fgousi@gmail.com (F.G.); nathalie.laboureau@cirad.fr (N.L.); michel.peterschmitt@cirad.fr (M.P.) 2 Plant Protection Laboratory, Regional Center of Agricultural Research of Meknes, National Institute of Agricultural Research, Meknes 50000, Morocco; zineb.belabess@inra.ma |
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| Author_xml | – sequence: 1 givenname: Fani orcidid: 0000-0002-2549-3257 surname: Gousi fullname: Gousi, Fani – sequence: 2 givenname: Zineb orcidid: 0000-0002-2436-0612 surname: Belabess fullname: Belabess, Zineb – sequence: 3 givenname: Nathalie orcidid: 0000-0002-0105-3919 surname: Laboureau fullname: Laboureau, Nathalie – sequence: 4 givenname: Michel surname: Peterschmitt fullname: Peterschmitt, Michel – sequence: 5 givenname: Mikhail M. orcidid: 0000-0003-2308-393X surname: Pooggin fullname: Pooggin, Mikhail M. |
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| Cites_doi | 10.5772/intechopen.100825 10.1128/genomeA.00589-16 10.1093/bioinformatics/btp698 10.1099/jgv.0.001371 10.1101/gr.074492.107 10.1007/s00705-020-04632-4 10.1093/nar/gkae1082 10.1093/nar/20.13.3279 10.1099/jgv.0.000396 10.1093/bioinformatics/bty191 10.1371/journal.pone.0108277 10.1128/JVI.02401-08 10.1128/MRA.01103-19 10.1093/nar/gkl253 10.1186/1748-7188-6-26 10.1007/s00427-002-0219-2 10.1186/1471-2164-12-458 10.1016/j.jviromet.2016.03.005 10.1038/s41522-021-00216-5 10.1093/molbev/msae263 10.1093/bioinformatics/btac830 10.3390/ijms252313199 10.1093/gbe/evaa074 10.1093/ve/vey016 10.1093/bioinformatics/btp352 10.1099/jgv.0.001212 |
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| SubjectTerms | Aleyrodidae Aleyrodoidea ambisense Amino acids Animals Bemisia tabaci Biological control Crop damage Crop fields Datasets densovirus Deoxyribonucleic acid DNA DNA biosynthesis DNA polymerase DNA replication DNA sequencing DNA viruses DNA, Viral - genetics Encapsidation Endonuclease Executives Food security Food supply Fusion protein Genetic diversity Genetic variance Genome, Viral Genomes Genomics Hemiptera - virology homotelomeric Insect pests Insects Invertebrates New genera Nucleases Nucleotide sequencing Packaging parvoviridae Parvovirus - classification Parvovirus - genetics Parvovirus - isolation & purification Parvoviruses Phylogenetics Phylogeny Plant Diseases - virology Plant viruses Proteins RNA RNA polymerase RNA viruses Single-stranded DNA Taxonomy Telomerase Viruses whitefly |
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| Title | A Novel Parvovirus Associated with the Whitefly Bemisia tabaci |
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