LoRDEC: accurate and efficient long read error correction

Motivation: PacBio single molecule real-time sequencing is a third-generation sequencing technique producing long reads, with comparatively lower throughput and higher error rate. Errors include numerous indels and complicate downstream analysis like mapping or de novo assembly. A hybrid strategy th...

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Bibliographic Details
Published in:	Bioinformatics (Oxford, England) Vol. 30; no. 24; pp. 3506 - 3514
Main Authors:	Salmela, Leena, Rivals, Eric
Format:	Journal Article
Language:	English
Published:	England Oxford University Press (OUP) 15.12.2014 Oxford University Press
Subjects:	Algorithms Animals Bioinformatics Computer Science Data Structures and Algorithms Escherichia coli - genetics Genomics - methods High-Throughput Nucleotide Sequencing - methods Hitseq Papers Parrots - genetics Software Yeasts - genetics genome de Bruijn graph k-mers reads index NGS PacBio algorithm
ISSN:	1367-4803, 1367-4811, 1367-4811
Online Access:	Get full text
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