Imaging linear and circular polarization features in leaves with complete Mueller matrix polarimetry

Spectropolarimetry of intact plant leaves allows to probe the molecular architecture of vegetation photosynthesis in a non-invasive and non-destructive way and, as such, can offer a wealth of physiological information. In addition to the molecular signals due to the photosynthetic machinery, the cel...

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Veröffentlicht in:	Biochimica et biophysica acta. General subjects Jg. 1862; H. 6; S. 1350 - 1363
Hauptverfasser:	Patty, C.H. Lucas, Luo, David A., Snik, Frans, Ariese, Freek, Buma, Wybren Jan, ten Kate, Inge Loes, van Spanning, Rob J.M., Sparks, William B., Germer, Thomas A., Garab, Győző, Kudenov, Michael W.
Format:	Journal Article
Sprache:	Englisch
Veröffentlicht:	Netherlands Elsevier B.V 01.06.2018
Schlagworte:	absorbance Algorithms chlorophyll Chlorophyll a Chloroplast chloroplasts Circular dichroism circular dichroism spectroscopy corn Image Processing, Computer-Assisted - methods leaves Light Microscopy, Polarization - methods Mueller matrix polarimetry Photosynthesis Plant Leaves - growth & development Plant Leaves - metabolism polarimetry Refractometry - methods vegetation Zea mays - growth & development Zea mays - metabolism Mueller matrix polarimetry Photosynthesis Chloroplast Circular dichroism Chlorophyll a
ISSN:	0304-4165, 1872-8006
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Abstract	Spectropolarimetry of intact plant leaves allows to probe the molecular architecture of vegetation photosynthesis in a non-invasive and non-destructive way and, as such, can offer a wealth of physiological information. In addition to the molecular signals due to the photosynthetic machinery, the cell structure and its arrangement within a leaf can create and modify polarization signals. Using Mueller matrix polarimetry with rotating retarder modulation, we have visualized spatial variations in polarization in transmission around the chlorophyll a absorbance band from 650 nm to 710 nm. We show linear and circular polarization measurements of maple leaves and cultivated maize leaves and discuss the corresponding Mueller matrices and the Mueller matrix decompositions, which show distinct features in diattenuation, polarizance, retardance and depolarization. Importantly, while normal leaf tissue shows a typical split signal with both a negative and a positive peak in the induced fractional circular polarization and circular dichroism, the signals close to the veins only display a negative band. The results are similar to the negative band as reported earlier for single macrodomains. We discuss the possible role of the chloroplast orientation around the veins as a cause of this phenomenon. Systematic artefacts are ruled out as three independent measurements by different instruments gave similar results. These results provide better insight into circular polarization measurements on whole leaves and options for vegetation remote sensing using circular polarization. •Complete imaging Mueller matrix polarimetry and decomposition on leaves around the chlorophyll absorbance band (650 nm–710 nm).•Distinctive spectropolarimetric features for the normal tissue and veins were distinguished in the Mueller matrix elements and decomposition.•Large differences in circular polarizance/dichroism: solely a negative signal in the veins versus the typical split signal in normal tissue.
AbstractList	Spectropolarimetry of intact plant leaves allows to probe the molecular architecture of vegetation photosynthesis in a non-invasive and non-destructive way and, as such, can offer a wealth of physiological information. In addition to the molecular signals due to the photosynthetic machinery, the cell structure and its arrangement within a leaf can create and modify polarization signals. Using Mueller matrix polarimetry with rotating retarder modulation, we have visualized spatial variations in polarization in transmission around the chlorophyll a absorbance band from 650 nm to 710 nm. We show linear and circular polarization measurements of maple leaves and cultivated maize leaves and discuss the corresponding Mueller matrices and the Mueller matrix decompositions, which show distinct features in diattenuation, polarizance, retardance and depolarization. Importantly, while normal leaf tissue shows a typical split signal with both a negative and a positive peak in the induced fractional circular polarization and circular dichroism, the signals close to the veins only display a negative band. The results are similar to the negative band as reported earlier for single macrodomains. We discuss the possible role of the chloroplast orientation around the veins as a cause of this phenomenon. Systematic artefacts are ruled out as three independent measurements by different instruments gave similar results. These results provide better insight into circular polarization measurements on whole leaves and options for vegetation remote sensing using circular polarization. •Complete imaging Mueller matrix polarimetry and decomposition on leaves around the chlorophyll absorbance band (650 nm–710 nm).•Distinctive spectropolarimetric features for the normal tissue and veins were distinguished in the Mueller matrix elements and decomposition.•Large differences in circular polarizance/dichroism: solely a negative signal in the veins versus the typical split signal in normal tissue. Spectropolarimetry of intact plant leaves allows to probe the molecular architecture of vegetation photosynthesis in a non-invasive and non-destructive way and, as such, can offer a wealth of physiological information. In addition to the molecular signals due to the photosynthetic machinery, the cell structure and its arrangement within a leaf can create and modify polarization signals. Using Mueller matrix polarimetry with rotating retarder modulation, we have visualized spatial variations in polarization in transmission around the chlorophyll a absorbance band from 650 nm to 710 nm. We show linear and circular polarization measurements of maple leaves and cultivated maize leaves and discuss the corresponding Mueller matrices and the Mueller matrix decompositions, which show distinct features in diattenuation, polarizance, retardance and depolarization. Importantly, while normal leaf tissue shows a typical split signal with both a negative and a positive peak in the induced fractional circular polarization and circular dichroism, the signals close to the veins only display a negative band. The results are similar to the negative band as reported earlier for single macrodomains. We discuss the possible role of the chloroplast orientation around the veins as a cause of this phenomenon. Systematic artefacts are ruled out as three independent measurements by different instruments gave similar results. These results provide better insight into circular polarization measurements on whole leaves and options for vegetation remote sensing using circular polarization. Spectropolarimetry of intact plant leaves allows to probe the molecular architecture of vegetation photosynthesis in a non-invasive and non-destructive way and, as such, can offer a wealth of physiological information. In addition to the molecular signals due to the photosynthetic machinery, the cell structure and its arrangement within a leaf can create and modify polarization signals. Using Mueller matrix polarimetry with rotating retarder modulation, we have visualized spatial variations in polarization in transmission around the chlorophyll a absorbance band from 650 nm to 710 nm. We show linear and circular polarization measurements of maple leaves and cultivated maize leaves and discuss the corresponding Mueller matrices and the Mueller matrix decompositions, which show distinct features in diattenuation, polarizance, retardance and depolarization. Importantly, while normal leaf tissue shows a typical split signal with both a negative and a positive peak in the induced fractional circular polarization and circular dichroism, the signals close to the veins only display a negative band. The results are similar to the negative band as reported earlier for single macrodomains. We discuss the possible role of the chloroplast orientation around the veins as a cause of this phenomenon. Systematic artefacts are ruled out as three independent measurements by different instruments gave similar results. These results provide better insight into circular polarization measurements on whole leaves and options for vegetation remote sensing using circular polarization.Spectropolarimetry of intact plant leaves allows to probe the molecular architecture of vegetation photosynthesis in a non-invasive and non-destructive way and, as such, can offer a wealth of physiological information. In addition to the molecular signals due to the photosynthetic machinery, the cell structure and its arrangement within a leaf can create and modify polarization signals. Using Mueller matrix polarimetry with rotating retarder modulation, we have visualized spatial variations in polarization in transmission around the chlorophyll a absorbance band from 650 nm to 710 nm. We show linear and circular polarization measurements of maple leaves and cultivated maize leaves and discuss the corresponding Mueller matrices and the Mueller matrix decompositions, which show distinct features in diattenuation, polarizance, retardance and depolarization. Importantly, while normal leaf tissue shows a typical split signal with both a negative and a positive peak in the induced fractional circular polarization and circular dichroism, the signals close to the veins only display a negative band. The results are similar to the negative band as reported earlier for single macrodomains. We discuss the possible role of the chloroplast orientation around the veins as a cause of this phenomenon. Systematic artefacts are ruled out as three independent measurements by different instruments gave similar results. These results provide better insight into circular polarization measurements on whole leaves and options for vegetation remote sensing using circular polarization.
Author	van Spanning, Rob J.M. Sparks, William B. Patty, C.H. Lucas Ariese, Freek ten Kate, Inge Loes Luo, David A. Snik, Frans Buma, Wybren Jan Germer, Thomas A. Garab, Győző Kudenov, Michael W.
Author_xml	– sequence: 1 givenname: C.H. Lucas surname: Patty fullname: Patty, C.H. Lucas email: lucas.patty@vu.nl organization: Molecular Cell Physiology, VU Amsterdam, De Boelelaan 1108, 1081 HZ Amsterdam, The Netherlands – sequence: 2 givenname: David A. surname: Luo fullname: Luo, David A. organization: Optical Sensing Lab, Department of Electrical and Computer Engineering, North Carolina State University, Raleigh, NC 27695, USA – sequence: 3 givenname: Frans surname: Snik fullname: Snik, Frans organization: Leiden Observatory, Leiden University, P.O. Box 9513, Leiden 2300 RA, The Netherlands – sequence: 4 givenname: Freek surname: Ariese fullname: Ariese, Freek organization: LaserLaB, VU Amsterdam, De Boelelaan 1083, Amsterdam 1081 HV, The Netherlands – sequence: 5 givenname: Wybren Jan surname: Buma fullname: Buma, Wybren Jan organization: HIMS, Photonics Group, University of Amsterdam, Science Park 904, 1098 XH Amsterdam, The Netherlands – sequence: 6 givenname: Inge Loes surname: ten Kate fullname: ten Kate, Inge Loes organization: Department of Earth Sciences, Utrecht University, Budapestlaan 4, Utrecht 3584 CD, The Netherlands – sequence: 7 givenname: Rob J.M. surname: van Spanning fullname: van Spanning, Rob J.M. organization: Systems Bioinformatics, VU Amsterdam, De Boelelaan 1108, Amsterdam 1081 HZ, The Netherlands – sequence: 8 givenname: William B. surname: Sparks fullname: Sparks, William B. organization: Space Telescope Science Institute, 3700 San Martin Drive, Baltimore, MD 21218, USA – sequence: 9 givenname: Thomas A. surname: Germer fullname: Germer, Thomas A. organization: Senior Science Division, National Institute of Standards and Technology, 100 Bureau Drive, Gaithersburg, MD 20899, USA – sequence: 10 givenname: Győző surname: Garab fullname: Garab, Győző organization: Institute of Plant Biology, Biological Research Centre, Hungarian Academy of Sciences, P.O. Box 521, Szeged H-6701, Hungary – sequence: 11 givenname: Michael W. surname: Kudenov fullname: Kudenov, Michael W. organization: Optical Sensing Lab, Department of Electrical and Computer Engineering, North Carolina State University, Raleigh, NC 27695, USA
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Cites_doi	10.1007/s11120-009-9424-4 10.1364/OL.29.002234 10.1016/j.jqsrt.2015.10.014 10.1364/AO.31.006676 10.1007/s00249-004-0454-8 10.1364/AO.41.002488 10.1073/pnas.0810215106 10.1016/j.jqsrt.2016.12.023 10.1021/bi00416a003 10.1007/s11120-011-9664-y 10.1016/j.bbabio.2016.04.287 10.1002/tcr.20020 10.1111/j.1399-3054.1993.tb01753.x 10.1364/OL.2.000148 10.1016/S0032-0633(96)00057-8 10.1016/j.jqsrt.2009.02.028 10.1364/AO.24.002408 10.1364/OL.32.000689 10.1111/j.1751-1097.1991.tb02016.x 10.1104/pp.52.1.54 10.1109/PROC.1985.13232 10.1021/bi001600d 10.1021/bi00407a027 10.1021/bi00407a028 10.1364/JOSAA.13.001106 10.1073/pnas.86.22.8748
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Keywords	Mueller matrix polarimetry Photosynthesis Chloroplast Circular dichroism Chlorophyll a
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References	Cseh, Rajagopal, Tsonev, Busheva, Papp, Garab (bb0150) 2000; 39 Vanderbilt, Grant, Biehl, Robinson (bb0045) 1985; 24 Garab, Wells, Finzi, Bustamante (bb0095) 1988; 27 Tóth, Rai, Solymosi, Zsiros, Schröder, Garab, van Amerongen, Horton, Kovács (bb0030) 2016; 1857 Goldstein (bb0140) 1992; 31 Garab, Galajda, Pomozi, Finzi, Praznovszky, Ormos, Van Amerongen (bb0170) 2005; 34 Sparks, Hough, Kolokolova, Germer, Chen, DasSarma, DasSarma, Robb, Manset, Reid, Macchetto, Martin (bb0080) 2009; 110 Wolstencroft, Tranter, Le Pevelen (bb0075) 2004; vol. 213 Finzi, Bustamante, Garab, Juang (bb0090) 1989; 86 Garab, Kieleczawa, Sutherland, Bustamante, Hind (bb0155) 1991; 54 Wolstencroft (bb0070) 1974 Vanderbilt, Daughtry, Kupinski, Bradley, French, Bronson, Chipman, Dahlgren (bb0055) 2017; vol. 10407 Garab, Faludi-Daniel, Sutherland, Hind (bb0105) 1988; 27 Fujii, Saito (bb0010) 2004; 4 Garab, van Amerongen (bb0020) 2009; 101 Ossikovski, Martino, Guyot (bb0125) 2007; 32 Garab, Leegood, Walker, Sutherland, Hind (bb0145) 1988; 27 Vanderbilt, Grant, Daughtry (bb0050) 1985; 73 MacDermott, Barron, Brack, Buhse, Drake, Emery, Gottarelli, Greenberg, Haberle, Hegstrom, Hobbs, Kondepudi, McKay, Moorbath, Raulin, Sandford, Schwartzman, Thiemann, Tranter, Zarnecki (bb0005) 1996; 44 Morio, Goudail (bb0115) 2004; 29 Smith (bb0135) 2002; 41 Fasman (bb0025) 2013 Miloslavina, Lambrev, Jávorfi, Várkonyi, Karlický, Wall, Hind, Garab (bb0110) 2012; 111 Faludi-Daniel, Demeter, Garay (bb0160) 1973; 52 Garab, Finzi, Bustamante (bb0100) 1991 Azzam (bb0130) 1978; 2 Patty, Visser, Ariese, Buma, Sparks, van Spanning, Röling, Snik (bb0035) 2017; 189 Sparks, Hough, Germer, Chen, DasSarma, DasSarma, Robb, Manset, Kolokolova, Reid (bb0085) 2009; 106 Urry, Cain, Wasserman, Minorsky, Reece (bb0015) 2016 Pospergelis (bb0065) 1969; 12 Grant, Daughtry, Vanderbilt (bb0060) 1993; 88 Martin, Hesse, Hough, Gledhill (bb0165) 2016; 170 Lu, Chipman (bb0120) 1996; 13 Peltoniemi, Gritsevich, Puttonen (bb0040) 2015 MacDermott (10.1016/j.bbagen.2018.03.005_bb0005) 1996; 44 Faludi-Daniel (10.1016/j.bbagen.2018.03.005_bb0160) 1973; 52 Vanderbilt (10.1016/j.bbagen.2018.03.005_bb0045) 1985; 24 Wolstencroft (10.1016/j.bbagen.2018.03.005_bb0075) 2004; vol. 213 Azzam (10.1016/j.bbagen.2018.03.005_bb0130) 1978; 2 Grant (10.1016/j.bbagen.2018.03.005_bb0060) 1993; 88 Goldstein (10.1016/j.bbagen.2018.03.005_bb0140) 1992; 31 Tóth (10.1016/j.bbagen.2018.03.005_bb0030) 2016; 1857 Garab (10.1016/j.bbagen.2018.03.005_bb0100) 1991 Lu (10.1016/j.bbagen.2018.03.005_bb0120) 1996; 13 Garab (10.1016/j.bbagen.2018.03.005_bb0095) 1988; 27 Garab (10.1016/j.bbagen.2018.03.005_bb0020) 2009; 101 Morio (10.1016/j.bbagen.2018.03.005_bb0115) 2004; 29 Urry (10.1016/j.bbagen.2018.03.005_bb0015) 2016 Sparks (10.1016/j.bbagen.2018.03.005_bb0080) 2009; 110 Ossikovski (10.1016/j.bbagen.2018.03.005_bb0125) 2007; 32 Peltoniemi (10.1016/j.bbagen.2018.03.005_bb0040) 2015 Garab (10.1016/j.bbagen.2018.03.005_bb0105) 1988; 27 Garab (10.1016/j.bbagen.2018.03.005_bb0145) 1988; 27 Sparks (10.1016/j.bbagen.2018.03.005_bb0085) 2009; 106 Vanderbilt (10.1016/j.bbagen.2018.03.005_bb0055) 2017; vol. 10407 Cseh (10.1016/j.bbagen.2018.03.005_bb0150) 2000; 39 Finzi (10.1016/j.bbagen.2018.03.005_bb0090) 1989; 86 Garab (10.1016/j.bbagen.2018.03.005_bb0155) 1991; 54 Fujii (10.1016/j.bbagen.2018.03.005_bb0010) 2004; 4 Fasman (10.1016/j.bbagen.2018.03.005_bb0025) 2013 Smith (10.1016/j.bbagen.2018.03.005_bb0135) 2002; 41 Vanderbilt (10.1016/j.bbagen.2018.03.005_bb0050) 1985; 73 Martin (10.1016/j.bbagen.2018.03.005_bb0165) 2016; 170 Miloslavina (10.1016/j.bbagen.2018.03.005_bb0110) 2012; 111 Wolstencroft (10.1016/j.bbagen.2018.03.005_bb0070) 1974 Garab (10.1016/j.bbagen.2018.03.005_bb0170) 2005; 34 Patty (10.1016/j.bbagen.2018.03.005_bb0035) 2017; 189 Pospergelis (10.1016/j.bbagen.2018.03.005_bb0065) 1969; 12
References_xml	– volume: 31 start-page: 6676 year: 1992 end-page: 6683 ident: bb0140 article-title: Mueller matrix dual-rotating retarder polarimeter publication-title: Appl. Opt. – volume: 101 start-page: 135 year: 2009 end-page: 146 ident: bb0020 article-title: Linear dichroism and circular dichroism in photosynthesis research publication-title: Photosynth. Res. – volume: 41 start-page: 2488 year: 2002 end-page: 2493 ident: bb0135 article-title: Optimization of a dual-rotating-retarder Mueller matrix polarimeter publication-title: Appl. Opt. – volume: 39 start-page: 15250 year: 2000 end-page: 15257 ident: bb0150 article-title: Thermooptic effect in chloroplast thylakoid membranes. thermal and light stability of pigment arrays with different levels of structural complexity publication-title: Biochemistry – volume: 13 start-page: 1106 year: 1996 end-page: 1113 ident: bb0120 article-title: Interpretation of Mueller matrices based on polar decomposition publication-title: J. Opt. Soc. Am. A – year: 2015 ident: bb0040 article-title: Reflectance and Polarization Characteristics of Various Vegetation Types – volume: 73 start-page: 1012 year: 1985 end-page: 1024 ident: bb0050 article-title: Polarization of light scattered by vegetation publication-title: Proc. IEEE – volume: 110 start-page: 1771 year: 2009 end-page: 1779 ident: bb0080 article-title: Circular polarization in scattered light as a possible biomarker publication-title: J. Quant. Spectrosc. Radiat. Transf. – volume: 1857 start-page: 1479 year: 2016 end-page: 1489 ident: bb0030 article-title: Fingerprinting the macro-organisation of pigment-protein complexes in plant thylakoid membranes in vivo by circular-dichroism spectroscopy publication-title: Biochim. Biophys. Acta, Bioenerg. – volume: 12 start-page: 973 year: 1969 ident: bb0065 article-title: Spectroscopic measurements of the four stokes parameters for light scattered by natural objects publication-title: Sov. Astron. – volume: 54 start-page: 273 year: 1991 end-page: 281 ident: bb0155 article-title: Organization of pigment-protein complexes into macrodomains in the thylakoid membranes of wild-type and chlorophyll Fo-less mutant of barley as revealed by circular dichroism publication-title: Photochem. Photobiol. – volume: 52 start-page: 54 year: 1973 end-page: 56 ident: bb0160 article-title: Circular dichroism spectra of granal and agranal chloroplasts of maize publication-title: Plant Physiol. – volume: 32 start-page: 689 year: 2007 end-page: 691 ident: bb0125 article-title: Forward and reverse product decompositions of depolarizing Mueller matrices publication-title: Opt. Lett. – volume: 27 start-page: 2430 year: 1988 end-page: 2434 ident: bb0145 article-title: Reversible changes in macroorganization of the light-harvesting chlorophyll a/b pigment-protein complex detected by circular dichroism publication-title: Biochemistry, – volume: vol. 213 start-page: 149 year: 2004 ident: bb0075 article-title: Diffuse Reflectance Circular Dichroism for the Detection of Molecular Chirality: An Application in Remote Sensing of Flora publication-title: Bioastronomy 2002: Life Among the Stars – volume: 27 start-page: 2425 year: 1988 end-page: 2430 ident: bb0105 article-title: Macroorganization of chlorophyll a/b light-harvesting complex in thylakoids and aggregates: information from circular differential scattering publication-title: Biochemistry – volume: 44 start-page: 1441 year: 1996 end-page: 1446 ident: bb0005 article-title: Homochirality as the signature of life: the SETH cigar publication-title: Planet. Space Sci. – volume: 189 start-page: 303 year: 2017 end-page: 311 ident: bb0035 article-title: Circular spectropolarimetric sensing of chiral photosystems in decaying leaves publication-title: J. Quant. Spectros. Radiat. Transfer – volume: 24 start-page: 2408 year: 1985 end-page: 2418 ident: bb0045 article-title: Specular, diffuse, and polarized light scattered by two wheat canopies publication-title: Appl. Opt. – volume: 34 start-page: 335 year: 2005 end-page: 343 ident: bb0170 article-title: Alignment of biological microparticles by a polarized laser beam publication-title: Eur. Biophys. J. – year: 2016 ident: bb0015 article-title: Campbell Biology – volume: 4 start-page: 267 year: 2004 end-page: 278 ident: bb0010 article-title: Homochirality and life publication-title: Chem. Rec. – volume: vol. 10407 year: 2017 ident: bb0055 article-title: Estimating The Relative Water Content of Leaves in a Cotton Canopy publication-title: Polarization Science and Remote Sensing VIII – year: 2013 ident: bb0025 article-title: Circular Dichroism and the Conformational Analysis of Biomolecules – volume: 29 start-page: 2234 year: 2004 end-page: 2236 ident: bb0115 article-title: Influence of the order of diattenuator, retarder, and polarizer in polar decomposition of Mueller matrices publication-title: Opt. Lett. – volume: 27 start-page: 5839 year: 1988 end-page: 5843 ident: bb0095 article-title: Helically organized macroaggregates of pigment-protein complexes in chloroplasts: evidence from circular intensity differential scattering publication-title: Biochemistry – volume: 86 start-page: 8748 year: 1989 end-page: 8752 ident: bb0090 article-title: Direct observation of large chiral domains in chloroplast thylakoid membranes by differential polarization microscopy publication-title: Proc. Natl. Acad. Sci. – volume: 2 start-page: 148 year: 1978 end-page: 150 ident: bb0130 article-title: Photopolarimetric measurement of the Mueller matrix by Fourier analysis of a single detected signal publication-title: Opt. Lett. – volume: 111 start-page: 29 year: 2012 end-page: 39 ident: bb0110 article-title: Anisotropic circular dichroism signatures of oriented thylakoid membranes and lamellar aggregates of lhcii publication-title: Photosynth. Res. – volume: 88 start-page: 1 year: 1993 end-page: 9 ident: bb0060 article-title: Polarized and specular reflectance variation with leaf surface features publication-title: Physiol. Plant. – start-page: 495 year: 1974 ident: bb0070 article-title: The circular polarization of light reflected from certain optically active surfaces, publication-title: IAU Colloq. 23: Planets, Stars, and Nebulae: Studied with Photopolarimetry – volume: 170 start-page: 131 year: 2016 end-page: 141 ident: bb0165 article-title: High-sensitivity stokes spectropolarimetry on cyanobacteria publication-title: J. Quant. Spectros. Radiat. Transfer – volume: 106 start-page: 7816 year: 2009 end-page: 7821 ident: bb0085 article-title: Detection of circular polarization in light scattered from photosynthetic microbes publication-title: Proc. Natl. Acad. Sci. – start-page: vol. 2 year: 1991 ident: bb0100 article-title: Differential Polarization Imaging of Chloroplasts: Microscopic and Macroscopic Linear and Circular Dichroism publication-title: Light in Biology and Medicine – year: 2013 ident: 10.1016/j.bbagen.2018.03.005_bb0025 – volume: 101 start-page: 135 issue: 2-3 year: 2009 ident: 10.1016/j.bbagen.2018.03.005_bb0020 article-title: Linear dichroism and circular dichroism in photosynthesis research publication-title: Photosynth. Res. doi: 10.1007/s11120-009-9424-4 – volume: 29 start-page: 2234 issue: 19 year: 2004 ident: 10.1016/j.bbagen.2018.03.005_bb0115 article-title: Influence of the order of diattenuator, retarder, and polarizer in polar decomposition of Mueller matrices publication-title: Opt. Lett. doi: 10.1364/OL.29.002234 – volume: 170 start-page: 131 year: 2016 ident: 10.1016/j.bbagen.2018.03.005_bb0165 article-title: High-sensitivity stokes spectropolarimetry on cyanobacteria publication-title: J. Quant. Spectros. Radiat. Transfer doi: 10.1016/j.jqsrt.2015.10.014 – start-page: 495 year: 1974 ident: 10.1016/j.bbagen.2018.03.005_bb0070 article-title: The circular polarization of light reflected from certain optically active surfaces, – volume: 31 start-page: 6676 issue: 31 year: 1992 ident: 10.1016/j.bbagen.2018.03.005_bb0140 article-title: Mueller matrix dual-rotating retarder polarimeter publication-title: Appl. Opt. doi: 10.1364/AO.31.006676 – volume: 34 start-page: 335 issue: 4 year: 2005 ident: 10.1016/j.bbagen.2018.03.005_bb0170 article-title: Alignment of biological microparticles by a polarized laser beam publication-title: Eur. Biophys. J. doi: 10.1007/s00249-004-0454-8 – volume: 41 start-page: 2488 issue: 13 year: 2002 ident: 10.1016/j.bbagen.2018.03.005_bb0135 article-title: Optimization of a dual-rotating-retarder Mueller matrix polarimeter publication-title: Appl. Opt. doi: 10.1364/AO.41.002488 – volume: 106 start-page: 7816 issue: 19 year: 2009 ident: 10.1016/j.bbagen.2018.03.005_bb0085 article-title: Detection of circular polarization in light scattered from photosynthetic microbes publication-title: Proc. Natl. Acad. Sci. doi: 10.1073/pnas.0810215106 – year: 2016 ident: 10.1016/j.bbagen.2018.03.005_bb0015 – volume: vol. 213 start-page: 149 year: 2004 ident: 10.1016/j.bbagen.2018.03.005_bb0075 article-title: Diffuse Reflectance Circular Dichroism for the Detection of Molecular Chirality: An Application in Remote Sensing of Flora – volume: vol. 10407 year: 2017 ident: 10.1016/j.bbagen.2018.03.005_bb0055 article-title: Estimating The Relative Water Content of Leaves in a Cotton Canopy – volume: 189 start-page: 303 year: 2017 ident: 10.1016/j.bbagen.2018.03.005_bb0035 article-title: Circular spectropolarimetric sensing of chiral photosystems in decaying leaves publication-title: J. Quant. Spectros. Radiat. Transfer doi: 10.1016/j.jqsrt.2016.12.023 – volume: 27 start-page: 5839 issue: 16 year: 1988 ident: 10.1016/j.bbagen.2018.03.005_bb0095 article-title: Helically organized macroaggregates of pigment-protein complexes in chloroplasts: evidence from circular intensity differential scattering publication-title: Biochemistry doi: 10.1021/bi00416a003 – volume: 111 start-page: 29 issue: 1-2 year: 2012 ident: 10.1016/j.bbagen.2018.03.005_bb0110 article-title: Anisotropic circular dichroism signatures of oriented thylakoid membranes and lamellar aggregates of lhcii publication-title: Photosynth. Res. doi: 10.1007/s11120-011-9664-y – volume: 1857 start-page: 1479 issue: 9 year: 2016 ident: 10.1016/j.bbagen.2018.03.005_bb0030 article-title: Fingerprinting the macro-organisation of pigment-protein complexes in plant thylakoid membranes in vivo by circular-dichroism spectroscopy publication-title: Biochim. Biophys. Acta, Bioenerg. doi: 10.1016/j.bbabio.2016.04.287 – volume: 4 start-page: 267 issue: 5 year: 2004 ident: 10.1016/j.bbagen.2018.03.005_bb0010 article-title: Homochirality and life publication-title: Chem. Rec. doi: 10.1002/tcr.20020 – volume: 88 start-page: 1 issue: 1 year: 1993 ident: 10.1016/j.bbagen.2018.03.005_bb0060 article-title: Polarized and specular reflectance variation with leaf surface features publication-title: Physiol. Plant. doi: 10.1111/j.1399-3054.1993.tb01753.x – volume: 2 start-page: 148 issue: 6 year: 1978 ident: 10.1016/j.bbagen.2018.03.005_bb0130 article-title: Photopolarimetric measurement of the Mueller matrix by Fourier analysis of a single detected signal publication-title: Opt. Lett. doi: 10.1364/OL.2.000148 – volume: 44 start-page: 1441 issue: 11 year: 1996 ident: 10.1016/j.bbagen.2018.03.005_bb0005 article-title: Homochirality as the signature of life: the SETH cigar publication-title: Planet. Space Sci. doi: 10.1016/S0032-0633(96)00057-8 – volume: 110 start-page: 1771 issue: 14-16 year: 2009 ident: 10.1016/j.bbagen.2018.03.005_bb0080 article-title: Circular polarization in scattered light as a possible biomarker publication-title: J. Quant. Spectrosc. Radiat. Transf. doi: 10.1016/j.jqsrt.2009.02.028 – volume: 24 start-page: 2408 issue: 15 year: 1985 ident: 10.1016/j.bbagen.2018.03.005_bb0045 article-title: Specular, diffuse, and polarized light scattered by two wheat canopies publication-title: Appl. Opt. doi: 10.1364/AO.24.002408 – start-page: vol. 2 year: 1991 ident: 10.1016/j.bbagen.2018.03.005_bb0100 article-title: Differential Polarization Imaging of Chloroplasts: Microscopic and Macroscopic Linear and Circular Dichroism – volume: 32 start-page: 689 issue: 6 year: 2007 ident: 10.1016/j.bbagen.2018.03.005_bb0125 article-title: Forward and reverse product decompositions of depolarizing Mueller matrices publication-title: Opt. Lett. doi: 10.1364/OL.32.000689 – volume: 54 start-page: 273 issue: 2 year: 1991 ident: 10.1016/j.bbagen.2018.03.005_bb0155 article-title: Organization of pigment-protein complexes into macrodomains in the thylakoid membranes of wild-type and chlorophyll Fo-less mutant of barley as revealed by circular dichroism publication-title: Photochem. Photobiol. doi: 10.1111/j.1751-1097.1991.tb02016.x – volume: 52 start-page: 54 issue: 1 year: 1973 ident: 10.1016/j.bbagen.2018.03.005_bb0160 article-title: Circular dichroism spectra of granal and agranal chloroplasts of maize publication-title: Plant Physiol. doi: 10.1104/pp.52.1.54 – volume: 73 start-page: 1012 issue: 6 year: 1985 ident: 10.1016/j.bbagen.2018.03.005_bb0050 article-title: Polarization of light scattered by vegetation publication-title: Proc. IEEE doi: 10.1109/PROC.1985.13232 – volume: 39 start-page: 15250 issue: 49 year: 2000 ident: 10.1016/j.bbagen.2018.03.005_bb0150 article-title: Thermooptic effect in chloroplast thylakoid membranes. thermal and light stability of pigment arrays with different levels of structural complexity publication-title: Biochemistry doi: 10.1021/bi001600d – year: 2015 ident: 10.1016/j.bbagen.2018.03.005_bb0040 – volume: 27 start-page: 2425 issue: 7 year: 1988 ident: 10.1016/j.bbagen.2018.03.005_bb0105 article-title: Macroorganization of chlorophyll a/b light-harvesting complex in thylakoids and aggregates: information from circular differential scattering publication-title: Biochemistry doi: 10.1021/bi00407a027 – volume: 27 start-page: 2430 issue: 7 year: 1988 ident: 10.1016/j.bbagen.2018.03.005_bb0145 article-title: Reversible changes in macroorganization of the light-harvesting chlorophyll a/b pigment-protein complex detected by circular dichroism publication-title: Biochemistry, doi: 10.1021/bi00407a028 – volume: 13 start-page: 1106 issue: 5 year: 1996 ident: 10.1016/j.bbagen.2018.03.005_bb0120 article-title: Interpretation of Mueller matrices based on polar decomposition publication-title: J. Opt. Soc. Am. A doi: 10.1364/JOSAA.13.001106 – volume: 12 start-page: 973 year: 1969 ident: 10.1016/j.bbagen.2018.03.005_bb0065 article-title: Spectroscopic measurements of the four stokes parameters for light scattered by natural objects publication-title: Sov. Astron. – volume: 86 start-page: 8748 issue: 22 year: 1989 ident: 10.1016/j.bbagen.2018.03.005_bb0090 article-title: Direct observation of large chiral domains in chloroplast thylakoid membranes by differential polarization microscopy publication-title: Proc. Natl. Acad. Sci. doi: 10.1073/pnas.86.22.8748
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Snippet	Spectropolarimetry of intact plant leaves allows to probe the molecular architecture of vegetation photosynthesis in a non-invasive and non-destructive way...
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SubjectTerms	absorbance Algorithms chlorophyll Chlorophyll a Chloroplast chloroplasts Circular dichroism circular dichroism spectroscopy corn Image Processing, Computer-Assisted - methods leaves Light Microscopy, Polarization - methods Mueller matrix polarimetry Photosynthesis Plant Leaves - growth & development Plant Leaves - metabolism polarimetry Refractometry - methods vegetation Zea mays - growth & development Zea mays - metabolism
Title	Imaging linear and circular polarization features in leaves with complete Mueller matrix polarimetry
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