Complete Genome Sequence of a Genotype G23P[37] Pheasant Rotavirus Strain Identified in Hungary
We investigated the genomic properties of a rotavirus A strain isolated from diarrheic pheasant poults in Hungary in 2015. Sequence analyses revealed a shared genomic constellation (G23-P[37]-I4-R4-C4-M4-A16-N10-T4-E4-H4) and close relationship (range of nucleotide sequence similarity: VP2, 88%; VP1...
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| Published in: | Genome announcements (Washington, DC) Vol. 4; no. 2 |
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| Main Authors: | , , , , , , , |
| Format: | Journal Article |
| Language: | English |
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United States
American Society for Microbiology
31.03.2016
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| ISSN: | 2169-8287, 2169-8287, 2576-098X |
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| Abstract | We investigated the genomic properties of a rotavirus A strain isolated from diarrheic pheasant poults in Hungary in 2015. Sequence analyses revealed a shared genomic constellation (G23-P[37]-I4-R4-C4-M4-A16-N10-T4-E4-H4) and close relationship (range of nucleotide sequence similarity: VP2, 88%; VP1 and NSP4, 98%) with another pheasant rotavirus strain isolated previously in Germany. |
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| AbstractList | We investigated the genomic properties of a rotavirus A strain isolated from diarrheic pheasant poults in Hungary in 2015. Sequence analyses revealed a shared genomic constellation (G23-P[37]-I4-R4-C4-M4-A16-N10-T4-E4-H4) and close relationship (range of nucleotide sequence similarity: VP2, 88%; VP1 and NSP4, 98%) with another pheasant rotavirus strain isolated previously in Germany. |
| Author | Farkas, Szilvia L. Bányai, Krisztián Marton, Szilvia Papp, Hajnalka Ihász, Katalin Gál, János Jakab, Ferenc Malik, Yashpal S. |
| Author_xml | – sequence: 1 givenname: János surname: Gál fullname: Gál, János organization: Department of Exotic Animal and Wildlife Medicine, Faculty of Veterinary Science, Szent István University, Budapest, Hungary – sequence: 2 givenname: Szilvia surname: Marton fullname: Marton, Szilvia organization: Momentum Pathogen Discovery Group, Institute for Veterinary Medical Research, Centre of Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary – sequence: 3 givenname: Katalin surname: Ihász fullname: Ihász, Katalin organization: Momentum Pathogen Discovery Group, Institute for Veterinary Medical Research, Centre of Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary – sequence: 4 givenname: Hajnalka surname: Papp fullname: Papp, Hajnalka organization: Momentum Cancer Biomarker Research Group, Research Centre for Natural Sciences, Hungarian Academy of Sciences, Magyar tudósok körútja, Budapest, Hungary – sequence: 5 givenname: Ferenc surname: Jakab fullname: Jakab, Ferenc organization: Virological Research Group, Szentágothai Research Centre, University of Pécs, Pécs, Hungary, Institute of Biology, Faculty of Sciences, University of Pécs, Pécs, Hungary – sequence: 6 givenname: Yashpal S. surname: Malik fullname: Malik, Yashpal S. organization: Division of Biological Standardization, Indian Veterinary Research Institute, Izatnagar, Bareilly, Uttar Pradesh, India – sequence: 7 givenname: Krisztián surname: Bányai fullname: Bányai, Krisztián organization: Momentum Pathogen Discovery Group, Institute for Veterinary Medical Research, Centre of Agricultural Research, Hungarian Academy of Sciences, Budapest, Hungary – sequence: 8 givenname: Szilvia L. surname: Farkas fullname: Farkas, Szilvia L. organization: Department of Exotic Animal and Wildlife Medicine, Faculty of Veterinary Science, Szent István University, Budapest, Hungary |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/27034484$$D View this record in MEDLINE/PubMed |
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| References | e_1_3_1_8_2 e_1_3_1_13_2 e_1_3_1_12_2 e_1_3_1_11_2 e_1_3_1_9_2 e_1_3_1_10_2 e_1_3_1_4_2 e_1_3_1_3_2 e_1_3_1_6_2 e_1_3_1_5_2 Papp H (e_1_3_1_7_2) 2014; 136 Estes M (e_1_3_1_2_2) 2007 24855935 - Emerg Infect Dis. 2014 Jun;20(6):1019-22 19930627 - BMC Microbiol. 2009 Nov 23;9:238 25811414 - Emerg Infect Dis. 2015 Apr;21(4):660-3 25917772 - Vet Q. 2015;35(3):142-58 19593592 - Arch Virol. 2009;154(8):1365-9 23052396 - J Gen Virol. 2013 Jan;94(Pt 1):136-42 25239526 - Infect Genet Evol. 2014 Dec;28:495-512 21597953 - Arch Virol. 2011 Aug;156(8):1397-413 22079218 - Vet Microbiol. 2012 Apr 23;156(1-2):8-15 24132122 - Mol Biol Evol. 2013 Dec;30(12):2725-9 |
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| Title | Complete Genome Sequence of a Genotype G23P[37] Pheasant Rotavirus Strain Identified in Hungary |
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