Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions
Leaf-litter decomposition is a central process in carbon cycling; however, our knowledge about the microbial regulation of this process is still scarce. Metaproteomics allows us to link the abundance and activity of enzymes during nutrient cycling to their phylogenetic origin based on proteins, the...
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| Veröffentlicht in: | The ISME Journal Jg. 6; H. 9; S. 1749 - 1762 |
|---|---|
| Hauptverfasser: | , , , , , , , , , |
| Format: | Journal Article |
| Sprache: | Englisch |
| Veröffentlicht: |
London
Nature Publishing Group UK
01.09.2012
Oxford University Press Nature Publishing Group |
| Schlagworte: | |
| ISSN: | 1751-7362, 1751-7370, 1751-7370 |
| Online-Zugang: | Volltext |
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| Abstract | Leaf-litter decomposition is a central process in carbon cycling; however, our knowledge about the microbial regulation of this process is still scarce. Metaproteomics allows us to link the abundance and activity of enzymes during nutrient cycling to their phylogenetic origin based on proteins, the ‘active building blocks’ in the system. Moreover, we employed metaproteomics to investigate the influence of environmental factors and nutrients on the decomposer structure and function during beech litter decomposition. Litter was collected at forest sites in Austria with different litter nutrient content. Proteins were analyzed by 1-D-SDS-PAGE followed by liquid-chromatography and tandem mass-spectrometry. Mass spectra were assigned to phylogenetic and functional groups by a newly developed bioinformatics workflow, assignments being validated by complementary approaches. We provide evidence that the litter nutrient content and the stoichiometry of C:N:P affect the decomposer community structure and activity. Fungi were found to be the main producers of extracellular hydrolytic enzymes, with no bacterial hydrolases being detected by our metaproteomics approach. Detailed investigation of microbial succession suggests that it is influenced by litter nutrient content. Microbial activity was stimulated at higher litter nutrient contents via a higher abundance and activity of extracellular enzymes. |
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| AbstractList | Leaf-litter decomposition is a central process in carbon cycling; however, our knowledge about the microbial regulation of this process is still scarce. Metaproteomics allows us to link the abundance and activity of enzymes during nutrient cycling to their phylogenetic origin based on proteins, the 'active building blocks' in the system. Moreover, we employed metaproteomics to investigate the influence of environmental factors and nutrients on the decomposer structure and function during beech litter decomposition. Litter was collected at forest sites in Austria with different litter nutrient content. Proteins were analyzed by 1-D-SDS-PAGE followed by liquid-chromatography and tandem mass-spectrometry. Mass spectra were assigned to phylogenetic and functional groups by a newly developed bioinformatics workflow, assignments being validated by complementary approaches. We provide evidence that the litter nutrient content and the stoichiometry of C:N:P affect the decomposer community structure and activity. Fungi were found to be the main producers of extracellular hydrolytic enzymes, with no bacterial hydrolases being detected by our metaproteomics approach. Detailed investigation of microbial succession suggests that it is influenced by litter nutrient content. Microbial activity was stimulated at higher litter nutrient contents via a higher abundance and activity of extracellular enzymes.Leaf-litter decomposition is a central process in carbon cycling; however, our knowledge about the microbial regulation of this process is still scarce. Metaproteomics allows us to link the abundance and activity of enzymes during nutrient cycling to their phylogenetic origin based on proteins, the 'active building blocks' in the system. Moreover, we employed metaproteomics to investigate the influence of environmental factors and nutrients on the decomposer structure and function during beech litter decomposition. Litter was collected at forest sites in Austria with different litter nutrient content. Proteins were analyzed by 1-D-SDS-PAGE followed by liquid-chromatography and tandem mass-spectrometry. Mass spectra were assigned to phylogenetic and functional groups by a newly developed bioinformatics workflow, assignments being validated by complementary approaches. We provide evidence that the litter nutrient content and the stoichiometry of C:N:P affect the decomposer community structure and activity. Fungi were found to be the main producers of extracellular hydrolytic enzymes, with no bacterial hydrolases being detected by our metaproteomics approach. Detailed investigation of microbial succession suggests that it is influenced by litter nutrient content. Microbial activity was stimulated at higher litter nutrient contents via a higher abundance and activity of extracellular enzymes. Leaf-litter decomposition is a central process in carbon cycling; however, our knowledge about the microbial regulation of this process is still scarce. Metaproteomics allows us to link the abundance and activity of enzymes during nutrient cycling to their phylogenetic origin based on proteins, the 'active building blocks' in the system. Moreover, we employed metaproteomics to investigate the influence of environmental factors and nutrients on the decomposer structure and function during beech litter decomposition. Litter was collected at forest sites in Austria with different litter nutrient content. Proteins were analyzed by 1-D-SDS-PAGE followed by liquid-chromatography and tandem mass-spectrometry. Mass spectra were assigned to phylogenetic and functional groups by a newly developed bioinformatics workflow, assignments being validated by complementary approaches. We provide evidence that the litter nutrient content and the stoichiometry of C:N:P affect the decomposer community structure and activity. Fungi were found to be the main producers of extracellular hydrolytic enzymes, with no bacterial hydrolases being detected by our metaproteomics approach. Detailed investigation of microbial succession suggests that it is influenced by litter nutrient content. Microbial activity was stimulated at higher litter nutrient contents via a higher abundance and activity of extracellular enzymes. |
| Author | Eberl, Leo Roschitzki, Bernd Schmid, Emanuel Sterflinger-Gleixner, Katja Keiblinger, Katharina M Zechmeister-Boltenstern, Sophie Schneider, Thomas Richter, Andreas Riedel, Kathrin Ellersdorfer, Günther |
| Author_xml | – sequence: 1 givenname: Thomas surname: Schneider fullname: Schneider, Thomas email: Thomas.Schneider@botinst.uzh.ch organization: Department of Microbiology, Institute of Plant Biology, University of Zurich – sequence: 2 givenname: Katharina M surname: Keiblinger fullname: Keiblinger, Katharina M organization: Department of Forest and Soil Sciences, Institute for Soil Research, University of Natural Resources and Life Sciences (BOKU) – sequence: 3 givenname: Emanuel surname: Schmid fullname: Schmid, Emanuel organization: Department of Microbiology, Institute of Plant Biology, University of Zurich – sequence: 4 givenname: Katja surname: Sterflinger-Gleixner fullname: Sterflinger-Gleixner, Katja organization: Department of Biotechnology, Institute of Applied Microbiology, University of Natural Resources and Life Sciences (BOKU) – sequence: 5 givenname: Günther surname: Ellersdorfer fullname: Ellersdorfer, Günther organization: Department of Biotechnology, Institute of Applied Microbiology, University of Natural Resources and Life Sciences (BOKU) – sequence: 6 givenname: Bernd surname: Roschitzki fullname: Roschitzki, Bernd organization: Functional Genomics Center, University & ETH Zurich – sequence: 7 givenname: Andreas surname: Richter fullname: Richter, Andreas organization: Chemical Ecology and Ecosystem Research, University of Vienna, School of Earth and Environment, The University of Western Australia – sequence: 8 givenname: Leo surname: Eberl fullname: Eberl, Leo organization: Department of Microbiology, Institute of Plant Biology, University of Zurich – sequence: 9 givenname: Sophie surname: Zechmeister-Boltenstern fullname: Zechmeister-Boltenstern, Sophie organization: Department of Forest and Soil Sciences, Institute for Soil Research, University of Natural Resources and Life Sciences (BOKU) – sequence: 10 givenname: Kathrin surname: Riedel fullname: Riedel, Kathrin organization: Department of Microbiology, Institute of Plant Biology, University of Zurich, Institute of Microbiology |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/22402400$$D View this record in MEDLINE/PubMed |
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| Cites_doi | 10.1016/j.mib.2009.03.004 10.1007/s00216-002-1379-7 10.1093/bioinformatics/bth092 10.1002/pmic.200900450 10.1177/0309133307076478 10.1890/0012-9658(2002)083[1026:COSDFA]2.0.CO;2 10.1016/j.soilbio.2005.04.017 10.1038/227680a0 10.1007/s10533-010-9439-0 10.1111/j.1461-0248.2007.01113.x 10.1111/j.1574-6968.1998.tb13096.x 10.1111/j.1461-0248.2008.01245.x 10.1007/s11284-007-0390-z 10.1016/j.soilbio.2004.04.042 10.1038/nmeth1019 10.1073/pnas.0507535103 10.1016/j.soilbio.2008.05.011 10.5194/bg-3-293-2006 10.2136/sssaj2009.0389 10.1890/10-1307.1 10.1038/ismej.2007.39 10.1007/BF00384433 10.5194/bg-3-383-2006 10.1002/pmic.200900402 10.1007/s10532-009-9261-3 10.1021/ac950914h 10.1038/nature08632 10.1073/pnas.0905240106 10.1080/15572536.2006.11832689 10.1007/s00216-007-1486-6 10.1046/j.1461-0248.2000.00185.x 10.1111/j.1574-6968.2008.01429.x 10.1111/j.1574-6941.2010.00999.x 10.1016/S0038-0717(03)00015-4 10.1016/j.soilbio.2004.08.023 10.1371/journal.pone.0010971 10.1016/S0065-2164(05)58004-3 10.1002/jobm.200900338 10.1111/j.1365-2435.2008.01478.x 10.1016/j.tim.2008.03.006 10.1021/pr060161n 10.1016/j.ymeth.2006.07.028 10.1128/MMBR.66.3.506-577.2002 10.1126/science.1107851 10.1038/ismej.2011.95 10.1007/s00442-004-1698-9 10.1016/S0966-842X(03)00152-5 10.1016/j.soilbio.2010.04.001 10.1007/978-3-540-74923-3 10.1002/pmic.201000679 10.1016/j.soilbio.2010.05.007 10.1016/j.soilbio.2008.08.017 10.1016/0168-6496(96)00008-6 10.1007/s00442-006-0562-5 10.1046/j.1461-0248.2003.00518.x 10.1002/pmic.200900691 10.1128/AEM.02294-08 10.1016/j.femsre.2004.11.005 10.1021/pr100981r 10.1007/978-3-642-60966-4 10.1126/science.1010716 10.1093/jpe/rtn002 10.1016/j.soilbio.2008.07.023 10.1007/b97397 10.1128/aem.59.11.3605-3617.1993 |
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| Keywords | litter nutrient content metaproteomics leaf-litter decomposition microbial ecology extracellular enzymes microbial succession |
| Language | English |
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| Publisher | Nature Publishing Group UK Oxford University Press Nature Publishing Group |
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| References | Newman, Banfield (CR39) 2002; 296 Wood, Bhat (CR67) 1988 Kitzler, Zechmeister-Boltenstern, Holtermann, Skiba, Butterbach-Bahl (CR31) 2006; 3 Joergensen, Wichern (CR26) 2008; 40 Sinsabaugh, Hill, Follstad Shah (CR53) 2009; 462 Sinsabaugh, Lauber, Weintraub, Ahmed, Allison, Crenshaw (CR54) 2008; 11 Laemmli (CR35) 1970; 227 Strickland, Rousk (CR57) 2010; 42 Vizcaino, Cote, Reisinger, Foster, Mueller, Rameseder (CR62) 2009; 9 Frostegard, Baath (CR18) 1996; 22 Kuzyakov, Blagodatskaya, Blagodatsky (CR34) 2009; 41 Hood-Nowotny, Umana, Inselbacher, Oswald-Lachouani, Wanek (CR25) 2010; 74 Kellner, Zak, Vandenbol (CR28) 2010; 5 Fierer, Jackson (CR16) 2006; 103 Klotzbücher, Kaiser, Guggenberger, Gatzek, Kalbitz (CR32) 2011; 92 Nocker, Camper (CR40) 2009; 291 Güsewell, Gessner (CR20) 2009; 23 Högberg, Högberg, Myrold (CR24) 2007; 150 Sterner, Elser (CR56) 2002 Elser, Acharya, Kyle, Cotner, Makino, Markow (CR13) 2003; 6 Meidute, Demoling, Baath (CR38) 2008; 40 Wang, Zhang, Li, He, Fang, Zhang (CR64) 2011; 10 Prescott (CR44) 2010; 101 König, Grasser, Pikor, Vogel (CR33) 2002; 374 Yadav, Malanson (CR68) 2007; 31 Berg, Mcclaugherty (CR6) 2008 Wanek, Mooshammer, Blochl, Hanreich, Richter (CR63) 2010; 42 Shevchenko, Wilm, Vorm, Mann (CR52) 1996; 68 Craig, Beavis (CR8) 2004; 20 de Boer, Folman, Summerbell, Boddy (CR9) 2005; 29 Wilmes, Bond (CR66) 2009; 12 Penalva, Tilburn, Bignell, Arst (CR43) 2008; 16 Kirby (CR29) 2006; 58 Baldrian, Kolarik, Stursova, Kopecky, Valaskova, Vetrovsky (CR2) 2012; 6 Domsch, Gams, Anderson (CR11) 2007 Osono (CR41) 2007; 22 Elser, Sterner, Gorokhova, Fagan, Markow, Cotner (CR15) 2000; 3 Elias, Gygi (CR12) 2007; 4 Delmotte, Knief, Chaffron, Innerebner, Roschitzki, Schlapbach (CR10) 2009; 106 Schulze, Gleixner, Kaiser, Guggenberger, Mann, Schulze (CR51) 2005; 142 Schneider, Gerrits, Gassmann, Schmid, Gessner, Richter (CR48) 2010; 10 Schneider, Riedel (CR49) 2010; 10 Schneider, Schmid, de Castro Junior, Cardinale, Eberl, Grube (CR50) 2011; 11 Velicer (CR61) 2003; 11 Baath (CR1) 1996; 19 Keiblinger, Hall, Wanek, Szukics, Hammerle, Ellersdorfer (CR27) 2010; 73 Kitzler, Zechmeister-Boltenstern, Holtermann, Skiba, Butterbach-Bahl (CR30) 2006; 3 Chapin, Matson, Mooney (CR7) 2002 Snajdr, Cajthaml, Valaskova, Merhautova, Petrankova, Spetz (CR55) 2011; 75 Tringe, von Mering, Kobayashi, Salamov, Chen, Chang (CR59) 2005; 308 Bantscheff, Schirle, Sweetman, Rick, Kuster (CR3) 2007; 389 Lynd, Weimer, van Zyl, Pretorius (CR37) 2002; 66 Schimel, Weintraub (CR46) 2003; 35 Benndorf, Balcke, Harms, von Bergen (CR4) 2007; 1 Lundell, Makela, Hilden (CR36) 2010; 50 Torres, Abril, Bucher (CR58) 2005; 37 Benndorf, Vogt, Jehmlich, Schmidt, Thomas, Woffendin (CR5) 2009; 20 Elser, Bracken, Cleland, Gruner, Harpole, Hillebrand (CR14) 2007; 10 Riedel, Ritter, Bauer, Bronnenmeier (CR45) 1998; 164 Schinner, Öhlinger, Kandeler, Margesin (CR47) 1996 van der Wal, van Veen, Smant, Boschker, Bloem, Kardol (CR60) 2006; 38 Osono, Takeda (CR42) 2006; 98 Florens, Carozza, Swanson, Fournier, Coleman, Workman (CR17) 2006; 40 Ward, Challacombe, Janssen, Henrissat, Coutinho, Wu (CR65) 2009; 75 Zhang, Hui, Luo, Zhou (CR69) 2008; 1 Frostegard, Tunlid, Baath (CR19) 1993; 59 Henschler (CR22) 1988 Zybailov, Mosley, Sardiu, Coleman, Florens, Washburn (CR70) 2006; 5 Hackl, Pfeffer, Donat, Bachmann, Zechmeister-Boltenstern (CR21) 2005; 37 Hieber, Gessner (CR23) 2002; 83 Tringe (2024020118253622300_CR59) 2005; 308 Domsch (2024020118253622300_CR11) 2007 Velicer (2024020118253622300_CR61) 2003; 11 Keiblinger (2024020118253622300_CR27) 2010; 73 Wilmes (2024020118253622300_CR66) 2009; 12 Sinsabaugh (2024020118253622300_CR54) 2008; 11 Wood (2024020118253622300_CR67) 1988 Zhang (2024020118253622300_CR69) 2008; 1 Lundell (2024020118253622300_CR36) 2010; 50 Sterner (2024020118253622300_CR56) 2002 Florens (2024020118253622300_CR17) 2006; 40 Strickland (2024020118253622300_CR57) 2010; 42 Craig (2024020118253622300_CR8) 2004; 20 Zybailov (2024020118253622300_CR70) 2006; 5 Frostegard (2024020118253622300_CR19) 1993; 59 Newman (2024020118253622300_CR39) 2002; 296 van der Wal (2024020118253622300_CR60) 2006; 38 Benndorf (2024020118253622300_CR4) 2007; 1 Schneider (2024020118253622300_CR50) 2011; 11 Högberg (2024020118253622300_CR24) 2007; 150 Kitzler (2024020118253622300_CR30) 2006; 3 Chapin (2024020118253622300_CR7) 2002 Wang (2024020118253622300_CR64) 2011; 10 Kuzyakov (2024020118253622300_CR34) 2009; 41 Kellner (2024020118253622300_CR28) 2010; 5 Laemmli (2024020118253622300_CR35) 1970; 227 Klotzbücher (2024020118253622300_CR32) 2011; 92 Shevchenko (2024020118253622300_CR52) 1996; 68 Torres (2024020118253622300_CR58) 2005; 37 Baldrian (2024020118253622300_CR2) 2012; 6 Nocker (2024020118253622300_CR40) 2009; 291 Kitzler (2024020118253622300_CR31) 2006; 3 Bantscheff (2024020118253622300_CR3) 2007; 389 Frostegard (2024020118253622300_CR18) 1996; 22 Fierer (2024020118253622300_CR16) 2006; 103 Lynd (2024020118253622300_CR37) 2002; 66 Delmotte (2024020118253622300_CR10) 2009; 106 Baath (2024020118253622300_CR1) 1996; 19 Vizcaino (2024020118253622300_CR62) 2009; 9 Penalva (2024020118253622300_CR43) 2008; 16 Schneider (2024020118253622300_CR49) 2010; 10 Snajdr (2024020118253622300_CR55) 2011; 75 Schulze (2024020118253622300_CR51) 2005; 142 Schinner (2024020118253622300_CR47) 1996 Hood-Nowotny (2024020118253622300_CR25) 2010; 74 Meidute (2024020118253622300_CR38) 2008; 40 Yadav (2024020118253622300_CR68) 2007; 31 Elser (2024020118253622300_CR15) 2000; 3 Kirby (2024020118253622300_CR29) 2006; 58 Benndorf (2024020118253622300_CR5) 2009; 20 Berg (2024020118253622300_CR6) 2008 Henschler (2024020118253622300_CR22) 1988 Riedel (2024020118253622300_CR45) 1998; 164 Hackl (2024020118253622300_CR21) 2005; 37 Hieber (2024020118253622300_CR23) 2002; 83 Prescott (2024020118253622300_CR44) 2010; 101 Wanek (2024020118253622300_CR63) 2010; 42 Osono (2024020118253622300_CR41) 2007; 22 Elser (2024020118253622300_CR13) 2003; 6 Osono (2024020118253622300_CR42) 2006; 98 Schneider (2024020118253622300_CR48) 2010; 10 Joergensen (2024020118253622300_CR26) 2008; 40 Ward (2024020118253622300_CR65) 2009; 75 König (2024020118253622300_CR33) 2002; 374 Sinsabaugh (2024020118253622300_CR53) 2009; 462 Elias (2024020118253622300_CR12) 2007; 4 de Boer (2024020118253622300_CR9) 2005; 29 Elser (2024020118253622300_CR14) 2007; 10 Schimel (2024020118253622300_CR46) 2003; 35 Güsewell (2024020118253622300_CR20) 2009; 23 19414280 - Curr Opin Microbiol. 2009 Jun;12(3):310-7 12875817 - Trends Microbiol. 2003 Jul;11(7):330-7 16407148 - Proc Natl Acad Sci U S A. 2006 Jan 17;103(3):626-31 16944946 - J Proteome Res. 2006 Sep;5(9):2339-47 21661566 - Ecology. 2011 May;92(5):1052-62 18457952 - Trends Microbiol. 2008 Jun;16(6):291-300 18043633 - ISME J. 2007 Jul;1(3):224-34 20532045 - PLoS One. 2010;5(6):e10971 19953545 - Proteomics. 2010 Feb;10(4):785-98 17033802 - Oecologia. 2007 Jan;150(4):590-601 17668192 - Anal Bioanal Chem. 2007 Oct;389(4):1017-31 9682475 - FEMS Microbiol Lett. 1998 Jul 15;164(2):261-7 19201974 - Appl Environ Microbiol. 2009 Apr;75(7):2046-56 20198641 - Proteomics. 2010 May;10(9):1819-30 16349080 - Appl Environ Microbiol. 1993 Nov;59(11):3605-17 17101441 - Methods. 2006 Dec;40(4):303-11 21114504 - FEMS Microbiol Ecol. 2011 Feb;75(2):291-303 12004119 - Science. 2002 May 10;296(5570):1071-7 19381451 - Biodegradation. 2009 Nov;20(6):737-50 16102603 - FEMS Microbiol Rev. 2005 Sep;29(4):795-811 19805315 - Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16428-33 15449171 - Oecologia. 2005 Jan;142(3):335-43 21776033 - ISME J. 2012 Feb;6(2):248-58 5432063 - Nature. 1970 Aug 15;227(5259):680-5 21604374 - Proteomics. 2011 Jul;11(13):2752-6 16894962 - Mycologia. 2006 Mar-Apr;98(2):172-9 19662629 - Proteomics. 2009 Sep;9(18):4276-83 12207246 - Anal Bioanal Chem. 2002 Sep;374(1):80-7 20550579 - FEMS Microbiol Ecol. 2010 Sep;73(3):430-40 14976030 - Bioinformatics. 2004 Jun 12;20(9):1466-7 18823393 - Ecol Lett. 2008 Nov;11(11):1252-64 8779443 - Anal Chem. 1996 Mar 1;68(5):850-8 17327847 - Nat Methods. 2007 Mar;4(3):207-14 12209002 - Microbiol Mol Biol Rev. 2002 Sep;66(3):506-77, table of contents 16509445 - Adv Appl Microbiol. 2006;58:125-68 19054073 - FEMS Microbiol Lett. 2009 Feb;291(2):137-42 15845853 - Science. 2005 Apr 22;308(5721):554-7 20175122 - J Basic Microbiol. 2010 Feb;50(1):5-20 17922835 - Ecol Lett. 2007 Dec;10(12):1135-42 20010687 - Nature. 2009 Dec 10;462(7274):795-8 21142081 - J Proteome Res. 2011 Mar 4;10(3):932-40 |
| References_xml | – volume: 12 start-page: 310 year: 2009 end-page: 317 ident: CR66 article-title: Microbial community proteomics: elucidating the catalysts and metabolic mechanisms that drive the Earth's biogeochemical cycles publication-title: Curr Opin Microbiol doi: 10.1016/j.mib.2009.03.004 – volume: 374 start-page: 80 year: 2002 end-page: 87 ident: CR33 article-title: Determination of xylanase, beta-glucanase, and cellulase activity publication-title: Anal Bioanal Chem doi: 10.1007/s00216-002-1379-7 – volume: 20 start-page: 1466 year: 2004 end-page: 1467 ident: CR8 article-title: TANDEM: matching proteins with tandem mass spectra publication-title: Bioinformatics doi: 10.1093/bioinformatics/bth092 – volume: 10 start-page: 785 year: 2010 end-page: 798 ident: CR49 article-title: Environmental proteomics: analysis of structure and function of microbial communities publication-title: Proteomics doi: 10.1002/pmic.200900450 – volume: 31 start-page: 131 year: 2007 end-page: 154 ident: CR68 article-title: Progress in soil organic matter research: litter decomposition, modelling, monitoring and sequestration publication-title: Prog Phys Geog doi: 10.1177/0309133307076478 – volume: 83 start-page: 1026 year: 2002 end-page: 1038 ident: CR23 article-title: Contribution of stream detrivores, fungi, and bacteria to leaf breakdown based on biomass estimates publication-title: Ecology doi: 10.1890/0012-9658(2002)083[1026:COSDFA]2.0.CO;2 – volume: 38 start-page: 51 year: 2006 end-page: 60 ident: CR60 article-title: Fungal biomass development in a chronosequence of land abandonment publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2005.04.017 – volume: 227 start-page: 680 year: 1970 end-page: 685 ident: CR35 article-title: Cleavage of structural proteins during the assembly of the head of bacteriophage T4 publication-title: Nature doi: 10.1038/227680a0 – volume: 101 start-page: 133 year: 2010 end-page: 149 ident: CR44 article-title: Litter decomposition: what controls it and how can we alter it to sequester more carbon in forest soils? publication-title: Biogeochemistry doi: 10.1007/s10533-010-9439-0 – start-page: 672 year: 2007 ident: CR11 publication-title: Compendium of Soil Fungi – volume: 10 start-page: 1135 year: 2007 end-page: 1142 ident: CR14 article-title: Global analysis of nitrogen and phosphorus limitation of primary producers in freshwater, marine and terrestrial ecosystems publication-title: Ecol Lett doi: 10.1111/j.1461-0248.2007.01113.x – volume: 164 start-page: 261 year: 1998 end-page: 267 ident: CR45 article-title: The modular cellulase CelZ of the thermophilic bacterium contains a thermostabilizing domain publication-title: FEMS Microbiol Lett doi: 10.1111/j.1574-6968.1998.tb13096.x – volume: 11 start-page: 1252 year: 2008 end-page: 1264 ident: CR54 article-title: Stoichiometry of soil enzyme activity at global scale publication-title: Ecol Lett doi: 10.1111/j.1461-0248.2008.01245.x – volume: 22 start-page: 955 year: 2007 end-page: 974 ident: CR41 article-title: Ecology of ligninolytic fungi associated with leaf litter decomposition publication-title: Ecol Res doi: 10.1007/s11284-007-0390-z – volume: 37 start-page: 49 year: 2005 end-page: 54 ident: CR58 article-title: Microbial succession in litter decomposition in the semi-arid Chaco woodland publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2004.04.042 – volume: 4 start-page: 207 year: 2007 end-page: 214 ident: CR12 article-title: Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry publication-title: Nat Methods doi: 10.1038/nmeth1019 – volume: 103 start-page: 626 year: 2006 end-page: 631 ident: CR16 article-title: The diversity and biogeography of soil bacterial communities publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.0507535103 – volume: 40 start-page: 2334 year: 2008 end-page: 2343 ident: CR38 article-title: Antagonistic and synergistic effects of fungal and bacterial growth in soil after adding different carbon and nitrogen sources publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2008.05.011 – volume: 3 start-page: 293 year: 2006 end-page: 310 ident: CR30 article-title: Nitrogen oxides emission from two beech forests subjected to different nitrogen loads publication-title: Biogeosciences doi: 10.5194/bg-3-293-2006 – volume: 74 start-page: 1018 year: 2010 end-page: 1027 ident: CR25 article-title: Alternative Methods for Measuring Inorganic, Organic, and Total Dissolved Nitrogen in Soil publication-title: Soil Sci Soc Am J doi: 10.2136/sssaj2009.0389 – volume: 73 start-page: 430 year: 2010 end-page: 440 ident: CR27 article-title: The effect of resource quantity and resource stoichiometry on microbial carbon-use-efficiency publication-title: FEMS Microbiol Ecol – volume: 92 start-page: 1052 year: 2011 end-page: 1062 ident: CR32 article-title: A new conceptual model for the fate of lignin in decomposing plant litter publication-title: Ecology doi: 10.1890/10-1307.1 – year: 2002 ident: CR56 publication-title: Ecological Stoichiometry: The Biology of Elements from Molecules to the Biosphere – volume: 1 start-page: 224 year: 2007 end-page: 234 ident: CR4 article-title: Functional metaproteome analysis of protein extracts from contaminated soil and groundwater publication-title: ISME J doi: 10.1038/ismej.2007.39 – volume: 22 start-page: 59 year: 1996 end-page: 65 ident: CR18 article-title: The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil publication-title: Biol Fertil Soils doi: 10.1007/BF00384433 – start-page: 87 year: 1988 end-page: 112 ident: CR67 article-title: Methods for measuring cellulase activities publication-title: Methods in Enymology – year: 1988 ident: CR22 publication-title: Analysen im biologischen Material – volume: 3 start-page: 383 year: 2006 end-page: 395 ident: CR31 article-title: Controls over N O, NO and CO fluxes in a calcareous mountain forest soil publication-title: Biogeosciences doi: 10.5194/bg-3-383-2006 – volume: 9 start-page: 4276 year: 2009 end-page: 4283 ident: CR62 article-title: A guide to the proteomics identifications database proteomics data repository publication-title: Proteomics doi: 10.1002/pmic.200900402 – volume: 20 start-page: 737 year: 2009 end-page: 750 ident: CR5 article-title: Improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments publication-title: Biodegradation doi: 10.1007/s10532-009-9261-3 – volume: 68 start-page: 850 year: 1996 end-page: 858 ident: CR52 article-title: Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels publication-title: Anal Chem doi: 10.1021/ac950914h – volume: 462 start-page: 795 year: 2009 end-page: 798 ident: CR53 article-title: Ecoenzymatic stoichiometry of microbial organic nutrient acquisition in soil and sediment publication-title: Nature doi: 10.1038/nature08632 – volume: 106 start-page: 16428 year: 2009 end-page: 16433 ident: CR10 article-title: Community proteogenomics reveals insights into the physiology of phyllosphere bacteria publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.0905240106 – volume: 98 start-page: 172 year: 2006 end-page: 179 ident: CR42 article-title: Fungal decomposition of needle and leaf litter publication-title: Mycologia doi: 10.1080/15572536.2006.11832689 – volume: 389 start-page: 1017 year: 2007 end-page: 1031 ident: CR3 article-title: Quantitative mass spectrometry in proteomics: a critical review publication-title: Anal Bioanal Chem doi: 10.1007/s00216-007-1486-6 – volume: 3 start-page: 540 year: 2000 end-page: 550 ident: CR15 article-title: Biological stoichiometry from genes to ecosystems publication-title: Ecol Lett doi: 10.1046/j.1461-0248.2000.00185.x – volume: 291 start-page: 137 year: 2009 end-page: 142 ident: CR40 article-title: Novel approaches toward preferential detection of viable cells using nucleic acid amplification techniques publication-title: FEMS Microbiol Lett doi: 10.1111/j.1574-6968.2008.01429.x – volume: 75 start-page: 291 year: 2011 end-page: 303 ident: CR55 article-title: Transformation of litter: successive changes in litter chemistry are reflected in differential enzyme activity and changes in the microbial community composition publication-title: FEMS Microbiol Ecol doi: 10.1111/j.1574-6941.2010.00999.x – volume: 35 start-page: 549 year: 2003 end-page: 563 ident: CR46 article-title: The implications of exoenzyme activity on microbial carbon and nitrogen limitation in soil: a theoretical model publication-title: Soil Biol Biochem doi: 10.1016/S0038-0717(03)00015-4 – volume: 37 start-page: 661 year: 2005 end-page: 671 ident: CR21 article-title: Composition of the microbial communities in the mineral soil under different types of natural forest publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2004.08.023 – volume: 5 start-page: e10971 year: 2010 ident: CR28 article-title: Fungi unearthed: transcripts encoding lignocellulolytic and chitinolytic enzymes in forest soil publication-title: PLoS One doi: 10.1371/journal.pone.0010971 – volume: 58 start-page: 125 year: 2006 end-page: 168 ident: CR29 article-title: Actinomycetes and lignin degradation publication-title: Adv Appl Microbiol doi: 10.1016/S0065-2164(05)58004-3 – volume: 50 start-page: 5 year: 2010 end-page: 20 ident: CR36 article-title: Lignin-modifying enzymes in filamentous basidiomycetes—ecological, functional and phylogenetic review publication-title: J Basic Microbiol doi: 10.1002/jobm.200900338 – volume: 59 start-page: 3605 year: 1993 end-page: 3617 ident: CR19 article-title: Phospholipid fatty-acid composition, biomass, and activity of microbial communities from 2 soil types experimentally exposed to different heavy-metals publication-title: Appl Environ Microbiol – volume: 23 start-page: 211 year: 2009 end-page: 219 ident: CR20 article-title: N:P ratios influence litter decomposition and colonization by fungi and bacteria in microcosms publication-title: Funct Ecol doi: 10.1111/j.1365-2435.2008.01478.x – volume: 16 start-page: 291 year: 2008 end-page: 300 ident: CR43 article-title: Ambient pH gene regulation in fungi: making connections publication-title: Trends Microbiol doi: 10.1016/j.tim.2008.03.006 – volume: 5 start-page: 2339 year: 2006 end-page: 2347 ident: CR70 article-title: Statistical analysis of membrane proteome expression changes in publication-title: J Proteome Res doi: 10.1021/pr060161n – volume: 40 start-page: 303 year: 2006 end-page: 311 ident: CR17 article-title: Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors publication-title: Methods doi: 10.1016/j.ymeth.2006.07.028 – volume: 66 start-page: 506 year: 2002 end-page: 577 ident: CR37 article-title: Microbial cellulose utilization: fundamentals and biotechnology publication-title: Microbiol Mol Biol Rev doi: 10.1128/MMBR.66.3.506-577.2002 – volume: 308 start-page: 554 year: 2005 end-page: 557 ident: CR59 article-title: Comparative metagenomics of microbial communities publication-title: Science doi: 10.1126/science.1107851 – volume: 6 start-page: 248 year: 2012 end-page: 258 ident: CR2 article-title: Active and total microbial communities in forest soil are largely different and highly stratified during decomposition publication-title: ISME J doi: 10.1038/ismej.2011.95 – volume: 142 start-page: 335 year: 2005 end-page: 343 ident: CR51 article-title: A proteomic fingerprint of dissolved organic carbon and of soil particles publication-title: Oecologia doi: 10.1007/s00442-004-1698-9 – volume: 11 start-page: 330 year: 2003 end-page: 337 ident: CR61 article-title: Social strife in the microbial world publication-title: Trends Microbiol doi: 10.1016/S0966-842X(03)00152-5 – year: 2002 ident: CR7 publication-title: Principles of Terrestrial Ecosystem Ecology – volume: 42 start-page: 1293 year: 2010 end-page: 1302 ident: CR63 article-title: Determination of gross rates of amino acid production and immobilization in decomposing leaf litter by a novel N-15 isotope pool dilution technique publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2010.04.001 – year: 2008 ident: CR6 publication-title: Plant litter: Decomposition, Humus Formation, Carbon Sequestration doi: 10.1007/978-3-540-74923-3 – volume: 11 start-page: 2752 year: 2011 end-page: 2756 ident: CR50 article-title: Structure and function of the symbiosis partners of the lung lichen ( L. Hoffm.) analyzed by metaproteomics publication-title: Proteomics doi: 10.1002/pmic.201000679 – volume: 42 start-page: 1385 year: 2010 end-page: 1395 ident: CR57 article-title: Considering fungal:bacterial dominance in soils - methods, controls, and ecosystem implications publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2010.05.007 – volume: 40 start-page: 2977 year: 2008 end-page: 2991 ident: CR26 article-title: Quantitative assessment of the fungal contribution to microbial tissue in soil publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2008.08.017 – volume: 19 start-page: 227 year: 1996 end-page: 237 ident: CR1 article-title: Adaptation of soil bacterial communities to prevailing pH in different soils publication-title: FEMS Microbiol Ecol doi: 10.1016/0168-6496(96)00008-6 – volume: 150 start-page: 590 year: 2007 end-page: 601 ident: CR24 article-title: Is microbial community composition in boreal forest soils determined by pH, C-to-N ratio, the trees, or all three? publication-title: Oecologia doi: 10.1007/s00442-006-0562-5 – volume: 6 start-page: 936 year: 2003 end-page: 943 ident: CR13 article-title: Growth rate-stoichiometry couplings in diverse biota publication-title: Ecol Lett doi: 10.1046/j.1461-0248.2003.00518.x – volume: 10 start-page: 1819 year: 2010 end-page: 1830 ident: CR48 article-title: Proteome analysis of fungal and bacterial involvement in leaf litter decomposition publication-title: Proteomics doi: 10.1002/pmic.200900691 – volume: 75 start-page: 2046 year: 2009 end-page: 2056 ident: CR65 article-title: Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils publication-title: Appl Environ Microbiol doi: 10.1128/AEM.02294-08 – volume: 29 start-page: 795 year: 2005 end-page: 811 ident: CR9 article-title: Living in a fungal world: impact of fungi on soil bacterial niche development publication-title: FEMS Microbiol Rev doi: 10.1016/j.femsre.2004.11.005 – volume: 10 start-page: 932 year: 2011 end-page: 940 ident: CR64 article-title: Characterization of metaproteomics in crop rhizospheric soil publication-title: J Proteome Res doi: 10.1021/pr100981r – year: 1996 ident: CR47 publication-title: Methods in Soil Biology doi: 10.1007/978-3-642-60966-4 – volume: 296 start-page: 1071 year: 2002 end-page: 1077 ident: CR39 article-title: Geomicrobiology: how molecular-scale interactions underpin biogeochemical systems publication-title: Science doi: 10.1126/science.1010716 – volume: 1 start-page: 85 year: 2008 end-page: 93 ident: CR69 article-title: Rates of litter decomposition in terrestrial ecosystems: global patterns and controlling factors publication-title: J Plant Ecol doi: 10.1093/jpe/rtn002 – volume: 41 start-page: 435 year: 2009 end-page: 439 ident: CR34 article-title: Comments on the paper by Kemmitt et al. (2008) ‘Mineralization of native soil organic matter is not regulated by the size, activity or composition of the soil microbial biomass - A new perspective’ [Soil Biology & Biochemistry 40, 61–73]: The biology of the Regulatory Gate publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2008.07.023 – volume: 11 start-page: 330 year: 2003 ident: 2024020118253622300_CR61 article-title: Social strife in the microbial world publication-title: Trends Microbiol doi: 10.1016/S0966-842X(03)00152-5 – volume-title: Methods in Soil Biology year: 1996 ident: 2024020118253622300_CR47 doi: 10.1007/978-3-642-60966-4 – volume: 92 start-page: 1052 year: 2011 ident: 2024020118253622300_CR32 article-title: A new conceptual model for the fate of lignin in decomposing plant litter publication-title: Ecology doi: 10.1890/10-1307.1 – volume: 42 start-page: 1385 year: 2010 ident: 2024020118253622300_CR57 article-title: Considering fungal:bacterial dominance in soils - methods, controls, and ecosystem implications publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2010.05.007 – volume: 38 start-page: 51 year: 2006 ident: 2024020118253622300_CR60 article-title: Fungal biomass development in a chronosequence of land abandonment publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2005.04.017 – volume-title: Principles of Terrestrial Ecosystem Ecology year: 2002 ident: 2024020118253622300_CR7 doi: 10.1007/b97397 – volume: 227 start-page: 680 year: 1970 ident: 2024020118253622300_CR35 article-title: Cleavage of structural proteins during the assembly of the head of bacteriophage T4 publication-title: Nature doi: 10.1038/227680a0 – volume: 308 start-page: 554 year: 2005 ident: 2024020118253622300_CR59 article-title: Comparative metagenomics of microbial communities publication-title: Science doi: 10.1126/science.1107851 – volume: 22 start-page: 59 year: 1996 ident: 2024020118253622300_CR18 article-title: The use of phospholipid fatty acid analysis to estimate bacterial and fungal biomass in soil publication-title: Biol Fertil Soils doi: 10.1007/BF00384433 – volume: 83 start-page: 1026 year: 2002 ident: 2024020118253622300_CR23 article-title: Contribution of stream detrivores, fungi, and bacteria to leaf breakdown based on biomass estimates publication-title: Ecology doi: 10.1890/0012-9658(2002)083[1026:COSDFA]2.0.CO;2 – volume: 20 start-page: 1466 year: 2004 ident: 2024020118253622300_CR8 article-title: TANDEM: matching proteins with tandem mass spectra publication-title: Bioinformatics doi: 10.1093/bioinformatics/bth092 – volume: 40 start-page: 2334 year: 2008 ident: 2024020118253622300_CR38 article-title: Antagonistic and synergistic effects of fungal and bacterial growth in soil after adding different carbon and nitrogen sources publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2008.05.011 – volume: 22 start-page: 955 year: 2007 ident: 2024020118253622300_CR41 article-title: Ecology of ligninolytic fungi associated with leaf litter decomposition publication-title: Ecol Res doi: 10.1007/s11284-007-0390-z – volume-title: Analysen im biologischen Material year: 1988 ident: 2024020118253622300_CR22 – volume: 50 start-page: 5 year: 2010 ident: 2024020118253622300_CR36 article-title: Lignin-modifying enzymes in filamentous basidiomycetes—ecological, functional and phylogenetic review publication-title: J Basic Microbiol doi: 10.1002/jobm.200900338 – volume: 1 start-page: 85 year: 2008 ident: 2024020118253622300_CR69 article-title: Rates of litter decomposition in terrestrial ecosystems: global patterns and controlling factors publication-title: J Plant Ecol doi: 10.1093/jpe/rtn002 – start-page: 87 volume-title: Methods in Enymology year: 1988 ident: 2024020118253622300_CR67 – volume: 23 start-page: 211 year: 2009 ident: 2024020118253622300_CR20 article-title: N:P ratios influence litter decomposition and colonization by fungi and bacteria in microcosms publication-title: Funct Ecol doi: 10.1111/j.1365-2435.2008.01478.x – volume: 35 start-page: 549 year: 2003 ident: 2024020118253622300_CR46 article-title: The implications of exoenzyme activity on microbial carbon and nitrogen limitation in soil: a theoretical model publication-title: Soil Biol Biochem doi: 10.1016/S0038-0717(03)00015-4 – volume: 4 start-page: 207 year: 2007 ident: 2024020118253622300_CR12 article-title: Target-decoy search strategy for increased confidence in large-scale protein identifications by mass spectrometry publication-title: Nat Methods doi: 10.1038/nmeth1019 – volume: 10 start-page: 1135 year: 2007 ident: 2024020118253622300_CR14 article-title: Global analysis of nitrogen and phosphorus limitation of primary producers in freshwater, marine and terrestrial ecosystems publication-title: Ecol Lett doi: 10.1111/j.1461-0248.2007.01113.x – volume: 12 start-page: 310 year: 2009 ident: 2024020118253622300_CR66 article-title: Microbial community proteomics: elucidating the catalysts and metabolic mechanisms that drive the Earth's biogeochemical cycles publication-title: Curr Opin Microbiol doi: 10.1016/j.mib.2009.03.004 – volume: 106 start-page: 16428 year: 2009 ident: 2024020118253622300_CR10 article-title: Community proteogenomics reveals insights into the physiology of phyllosphere bacteria publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.0905240106 – volume: 6 start-page: 936 year: 2003 ident: 2024020118253622300_CR13 article-title: Growth rate-stoichiometry couplings in diverse biota publication-title: Ecol Lett doi: 10.1046/j.1461-0248.2003.00518.x – volume: 40 start-page: 2977 year: 2008 ident: 2024020118253622300_CR26 article-title: Quantitative assessment of the fungal contribution to microbial tissue in soil publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2008.08.017 – volume: 31 start-page: 131 year: 2007 ident: 2024020118253622300_CR68 article-title: Progress in soil organic matter research: litter decomposition, modelling, monitoring and sequestration publication-title: Prog Phys Geog doi: 10.1177/0309133307076478 – volume: 19 start-page: 227 year: 1996 ident: 2024020118253622300_CR1 article-title: Adaptation of soil bacterial communities to prevailing pH in different soils publication-title: FEMS Microbiol Ecol doi: 10.1016/0168-6496(96)00008-6 – volume: 58 start-page: 125 year: 2006 ident: 2024020118253622300_CR29 article-title: Actinomycetes and lignin degradation publication-title: Adv Appl Microbiol doi: 10.1016/S0065-2164(05)58004-3 – volume: 10 start-page: 932 year: 2011 ident: 2024020118253622300_CR64 article-title: Characterization of metaproteomics in crop rhizospheric soil publication-title: J Proteome Res doi: 10.1021/pr100981r – volume: 9 start-page: 4276 year: 2009 ident: 2024020118253622300_CR62 article-title: A guide to the proteomics identifications database proteomics data repository publication-title: Proteomics doi: 10.1002/pmic.200900402 – volume-title: Plant litter: Decomposition, Humus Formation, Carbon Sequestration year: 2008 ident: 2024020118253622300_CR6 doi: 10.1007/978-3-540-74923-3 – volume: 20 start-page: 737 year: 2009 ident: 2024020118253622300_CR5 article-title: Improving protein extraction and separation methods for investigating the metaproteome of anaerobic benzene communities within sediments publication-title: Biodegradation doi: 10.1007/s10532-009-9261-3 – volume: 101 start-page: 133 year: 2010 ident: 2024020118253622300_CR44 article-title: Litter decomposition: what controls it and how can we alter it to sequester more carbon in forest soils? publication-title: Biogeochemistry doi: 10.1007/s10533-010-9439-0 – volume: 142 start-page: 335 year: 2005 ident: 2024020118253622300_CR51 article-title: A proteomic fingerprint of dissolved organic carbon and of soil particles publication-title: Oecologia doi: 10.1007/s00442-004-1698-9 – volume: 75 start-page: 2046 year: 2009 ident: 2024020118253622300_CR65 article-title: Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils publication-title: Appl Environ Microbiol doi: 10.1128/AEM.02294-08 – volume: 73 start-page: 430 year: 2010 ident: 2024020118253622300_CR27 article-title: The effect of resource quantity and resource stoichiometry on microbial carbon-use-efficiency publication-title: FEMS Microbiol Ecol – volume: 1 start-page: 224 year: 2007 ident: 2024020118253622300_CR4 article-title: Functional metaproteome analysis of protein extracts from contaminated soil and groundwater publication-title: ISME J doi: 10.1038/ismej.2007.39 – volume: 37 start-page: 661 year: 2005 ident: 2024020118253622300_CR21 article-title: Composition of the microbial communities in the mineral soil under different types of natural forest publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2004.08.023 – volume: 103 start-page: 626 year: 2006 ident: 2024020118253622300_CR16 article-title: The diversity and biogeography of soil bacterial communities publication-title: Proc Natl Acad Sci USA doi: 10.1073/pnas.0507535103 – volume: 98 start-page: 172 year: 2006 ident: 2024020118253622300_CR42 article-title: Fungal decomposition of Abies needle and Betula leaf litter publication-title: Mycologia doi: 10.1080/15572536.2006.11832689 – start-page: 672 volume-title: Compendium of Soil Fungi year: 2007 ident: 2024020118253622300_CR11 – volume: 462 start-page: 795 year: 2009 ident: 2024020118253622300_CR53 article-title: Ecoenzymatic stoichiometry of microbial organic nutrient acquisition in soil and sediment publication-title: Nature doi: 10.1038/nature08632 – volume: 16 start-page: 291 year: 2008 ident: 2024020118253622300_CR43 article-title: Ambient pH gene regulation in fungi: making connections publication-title: Trends Microbiol doi: 10.1016/j.tim.2008.03.006 – volume: 11 start-page: 2752 year: 2011 ident: 2024020118253622300_CR50 article-title: Structure and function of the symbiosis partners of the lung lichen (Lobaria pulmonaria L. Hoffm.) analyzed by metaproteomics publication-title: Proteomics doi: 10.1002/pmic.201000679 – volume: 11 start-page: 1252 year: 2008 ident: 2024020118253622300_CR54 article-title: Stoichiometry of soil enzyme activity at global scale publication-title: Ecol Lett doi: 10.1111/j.1461-0248.2008.01245.x – volume: 40 start-page: 303 year: 2006 ident: 2024020118253622300_CR17 article-title: Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors publication-title: Methods doi: 10.1016/j.ymeth.2006.07.028 – volume: 3 start-page: 383 year: 2006 ident: 2024020118253622300_CR31 article-title: Controls over N2O, NOx and CO2 fluxes in a calcareous mountain forest soil publication-title: Biogeosciences doi: 10.5194/bg-3-383-2006 – volume: 374 start-page: 80 year: 2002 ident: 2024020118253622300_CR33 article-title: Determination of xylanase, beta-glucanase, and cellulase activity publication-title: Anal Bioanal Chem doi: 10.1007/s00216-002-1379-7 – volume: 150 start-page: 590 year: 2007 ident: 2024020118253622300_CR24 article-title: Is microbial community composition in boreal forest soils determined by pH, C-to-N ratio, the trees, or all three? publication-title: Oecologia doi: 10.1007/s00442-006-0562-5 – volume: 29 start-page: 795 year: 2005 ident: 2024020118253622300_CR9 article-title: Living in a fungal world: impact of fungi on soil bacterial niche development publication-title: FEMS Microbiol Rev doi: 10.1016/j.femsre.2004.11.005 – volume: 10 start-page: 1819 year: 2010 ident: 2024020118253622300_CR48 article-title: Proteome analysis of fungal and bacterial involvement in leaf litter decomposition publication-title: Proteomics doi: 10.1002/pmic.200900691 – volume: 10 start-page: 785 year: 2010 ident: 2024020118253622300_CR49 article-title: Environmental proteomics: analysis of structure and function of microbial communities publication-title: Proteomics doi: 10.1002/pmic.200900450 – volume: 75 start-page: 291 year: 2011 ident: 2024020118253622300_CR55 article-title: Transformation of Quercus petraea litter: successive changes in litter chemistry are reflected in differential enzyme activity and changes in the microbial community composition publication-title: FEMS Microbiol Ecol doi: 10.1111/j.1574-6941.2010.00999.x – volume: 41 start-page: 435 year: 2009 ident: 2024020118253622300_CR34 article-title: Comments on the paper by Kemmitt et al. (2008) ‘Mineralization of native soil organic matter is not regulated by the size, activity or composition of the soil microbial biomass - A new perspective’ [Soil Biology & Biochemistry 40, 61–73]: The biology of the Regulatory Gate publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2008.07.023 – volume: 296 start-page: 1071 year: 2002 ident: 2024020118253622300_CR39 article-title: Geomicrobiology: how molecular-scale interactions underpin biogeochemical systems publication-title: Science doi: 10.1126/science.1010716 – volume: 5 start-page: 2339 year: 2006 ident: 2024020118253622300_CR70 article-title: Statistical analysis of membrane proteome expression changes in Saccharomyces cerevisiae publication-title: J Proteome Res doi: 10.1021/pr060161n – volume: 74 start-page: 1018 year: 2010 ident: 2024020118253622300_CR25 article-title: Alternative Methods for Measuring Inorganic, Organic, and Total Dissolved Nitrogen in Soil publication-title: Soil Sci Soc Am J doi: 10.2136/sssaj2009.0389 – volume: 3 start-page: 540 year: 2000 ident: 2024020118253622300_CR15 article-title: Biological stoichiometry from genes to ecosystems publication-title: Ecol Lett doi: 10.1046/j.1461-0248.2000.00185.x – volume: 291 start-page: 137 year: 2009 ident: 2024020118253622300_CR40 article-title: Novel approaches toward preferential detection of viable cells using nucleic acid amplification techniques publication-title: FEMS Microbiol Lett doi: 10.1111/j.1574-6968.2008.01429.x – volume-title: Ecological Stoichiometry: The Biology of Elements from Molecules to the Biosphere year: 2002 ident: 2024020118253622300_CR56 – volume: 389 start-page: 1017 year: 2007 ident: 2024020118253622300_CR3 article-title: Quantitative mass spectrometry in proteomics: a critical review publication-title: Anal Bioanal Chem doi: 10.1007/s00216-007-1486-6 – volume: 59 start-page: 3605 year: 1993 ident: 2024020118253622300_CR19 article-title: Phospholipid fatty-acid composition, biomass, and activity of microbial communities from 2 soil types experimentally exposed to different heavy-metals publication-title: Appl Environ Microbiol doi: 10.1128/aem.59.11.3605-3617.1993 – volume: 3 start-page: 293 year: 2006 ident: 2024020118253622300_CR30 article-title: Nitrogen oxides emission from two beech forests subjected to different nitrogen loads publication-title: Biogeosciences doi: 10.5194/bg-3-293-2006 – volume: 68 start-page: 850 year: 1996 ident: 2024020118253622300_CR52 article-title: Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels publication-title: Anal Chem doi: 10.1021/ac950914h – volume: 37 start-page: 49 year: 2005 ident: 2024020118253622300_CR58 article-title: Microbial succession in litter decomposition in the semi-arid Chaco woodland publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2004.04.042 – volume: 6 start-page: 248 year: 2012 ident: 2024020118253622300_CR2 article-title: Active and total microbial communities in forest soil are largely different and highly stratified during decomposition publication-title: ISME J doi: 10.1038/ismej.2011.95 – volume: 66 start-page: 506 year: 2002 ident: 2024020118253622300_CR37 article-title: Microbial cellulose utilization: fundamentals and biotechnology publication-title: Microbiol Mol Biol Rev doi: 10.1128/MMBR.66.3.506-577.2002 – volume: 164 start-page: 261 year: 1998 ident: 2024020118253622300_CR45 article-title: The modular cellulase CelZ of the thermophilic bacterium Clostridium stercorarium contains a thermostabilizing domain publication-title: FEMS Microbiol Lett doi: 10.1111/j.1574-6968.1998.tb13096.x – volume: 5 start-page: e10971 year: 2010 ident: 2024020118253622300_CR28 article-title: Fungi unearthed: transcripts encoding lignocellulolytic and chitinolytic enzymes in forest soil publication-title: PLoS One doi: 10.1371/journal.pone.0010971 – volume: 42 start-page: 1293 year: 2010 ident: 2024020118253622300_CR63 article-title: Determination of gross rates of amino acid production and immobilization in decomposing leaf litter by a novel N-15 isotope pool dilution technique publication-title: Soil Biol Biochem doi: 10.1016/j.soilbio.2010.04.001 – reference: 12004119 - Science. 2002 May 10;296(5570):1071-7 – reference: 19414280 - Curr Opin Microbiol. 2009 Jun;12(3):310-7 – reference: 19381451 - Biodegradation. 2009 Nov;20(6):737-50 – reference: 17033802 - Oecologia. 2007 Jan;150(4):590-601 – reference: 17668192 - Anal Bioanal Chem. 2007 Oct;389(4):1017-31 – reference: 15845853 - Science. 2005 Apr 22;308(5721):554-7 – reference: 8779443 - Anal Chem. 1996 Mar 1;68(5):850-8 – reference: 16407148 - Proc Natl Acad Sci U S A. 2006 Jan 17;103(3):626-31 – reference: 19805315 - Proc Natl Acad Sci U S A. 2009 Sep 22;106(38):16428-33 – reference: 21776033 - ISME J. 2012 Feb;6(2):248-58 – reference: 19054073 - FEMS Microbiol Lett. 2009 Feb;291(2):137-42 – reference: 16102603 - FEMS Microbiol Rev. 2005 Sep;29(4):795-811 – reference: 19201974 - Appl Environ Microbiol. 2009 Apr;75(7):2046-56 – reference: 21604374 - Proteomics. 2011 Jul;11(13):2752-6 – reference: 5432063 - Nature. 1970 Aug 15;227(5259):680-5 – reference: 12207246 - Anal Bioanal Chem. 2002 Sep;374(1):80-7 – reference: 16349080 - Appl Environ Microbiol. 1993 Nov;59(11):3605-17 – reference: 19662629 - Proteomics. 2009 Sep;9(18):4276-83 – reference: 18457952 - Trends Microbiol. 2008 Jun;16(6):291-300 – reference: 21114504 - FEMS Microbiol Ecol. 2011 Feb;75(2):291-303 – reference: 20532045 - PLoS One. 2010;5(6):e10971 – reference: 17327847 - Nat Methods. 2007 Mar;4(3):207-14 – reference: 18043633 - ISME J. 2007 Jul;1(3):224-34 – reference: 12209002 - Microbiol Mol Biol Rev. 2002 Sep;66(3):506-77, table of contents – reference: 21142081 - J Proteome Res. 2011 Mar 4;10(3):932-40 – reference: 20198641 - Proteomics. 2010 May;10(9):1819-30 – reference: 20550579 - FEMS Microbiol Ecol. 2010 Sep;73(3):430-40 – reference: 9682475 - FEMS Microbiol Lett. 1998 Jul 15;164(2):261-7 – reference: 16894962 - Mycologia. 2006 Mar-Apr;98(2):172-9 – reference: 16944946 - J Proteome Res. 2006 Sep;5(9):2339-47 – reference: 20175122 - J Basic Microbiol. 2010 Feb;50(1):5-20 – reference: 16509445 - Adv Appl Microbiol. 2006;58:125-68 – reference: 18823393 - Ecol Lett. 2008 Nov;11(11):1252-64 – reference: 19953545 - Proteomics. 2010 Feb;10(4):785-98 – reference: 12875817 - Trends Microbiol. 2003 Jul;11(7):330-7 – reference: 17101441 - Methods. 2006 Dec;40(4):303-11 – reference: 20010687 - Nature. 2009 Dec 10;462(7274):795-8 – reference: 21661566 - Ecology. 2011 May;92(5):1052-62 – reference: 14976030 - Bioinformatics. 2004 Jun 12;20(9):1466-7 – reference: 15449171 - Oecologia. 2005 Jan;142(3):335-43 – reference: 17922835 - Ecol Lett. 2007 Dec;10(12):1135-42 |
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| Title | Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions |
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