Design Parameters for Granzyme-Mediated Cytotoxic Lymphocyte Target-Cell Killing and Specificity

Cytotoxic lymphocytes are key elements of the immune system that are primarily responsible for targeting cells infected with intracellular pathogens, or cells that have become malignantly transformed. Target cells are killed mainly via lymphocyte exocytosis of specialized lysosomes containing perfor...

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Published in:Biophysical journal Vol. 109; no. 3; pp. 477 - 488
Main Authors: Woodsworth, Daniel J, Dunsing, Valentin, Coombs, Daniel
Format: Journal Article
Language:English
Published: United States 04.08.2015
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ISSN:1542-0086
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Abstract Cytotoxic lymphocytes are key elements of the immune system that are primarily responsible for targeting cells infected with intracellular pathogens, or cells that have become malignantly transformed. Target cells are killed mainly via lymphocyte exocytosis of specialized lysosomes containing perforin, a pore-forming protein, and granzymes, which are proteases that induce apoptosis. Due to its central role in lymphocyte biology, as well as its implication in a host of pathologies from cancer to autoimmunity, the granzyme-perforin pathway has been the subject of extensive investigation. Nevertheless, the details of exactly how granzyme and perforin cooperate to induce target-cell death remain controversial. To further investigate this system, we developed a biophysical model of the immunological synapse between a cytotoxic lymphocyte and a target cell using a spatial stochastic simulation algorithm. We used this model to calculate the spatiotemporal evolution of granzyme B and perforin from the time of their exocytosis to granzyme internalization by the target cell. We used a metric of granzyme internalization to delineate which biological processes were critical for successful target-cell lysis. We found that the high aspect ratio of the immunological synapse was insufficient in this regard, and that molecular crowding within the synapse is critical to preserve sufficient concentrations of perforin and granzyme for consistent pore formation and granzyme transfer to target cells. However, even when pore formation occurs in our model, a large amount of both granzyme and perforin still escape from the synapse. We argue that a tight seal between the cytotoxic lymphocyte and its target cell is not required to avoid bystander killing. Instead, we propose that the requirement for spatiotemporal colocalization of granzyme and perforin acts as an effective bimolecular filter to ensure target specificity.
AbstractList Cytotoxic lymphocytes are key elements of the immune system that are primarily responsible for targeting cells infected with intracellular pathogens, or cells that have become malignantly transformed. Target cells are killed mainly via lymphocyte exocytosis of specialized lysosomes containing perforin, a pore-forming protein, and granzymes, which are proteases that induce apoptosis. Due to its central role in lymphocyte biology, as well as its implication in a host of pathologies from cancer to autoimmunity, the granzyme-perforin pathway has been the subject of extensive investigation. Nevertheless, the details of exactly how granzyme and perforin cooperate to induce target-cell death remain controversial. To further investigate this system, we developed a biophysical model of the immunological synapse between a cytotoxic lymphocyte and a target cell using a spatial stochastic simulation algorithm. We used this model to calculate the spatiotemporal evolution of granzyme B and perforin from the time of their exocytosis to granzyme internalization by the target cell. We used a metric of granzyme internalization to delineate which biological processes were critical for successful target-cell lysis. We found that the high aspect ratio of the immunological synapse was insufficient in this regard, and that molecular crowding within the synapse is critical to preserve sufficient concentrations of perforin and granzyme for consistent pore formation and granzyme transfer to target cells. However, even when pore formation occurs in our model, a large amount of both granzyme and perforin still escape from the synapse. We argue that a tight seal between the cytotoxic lymphocyte and its target cell is not required to avoid bystander killing. Instead, we propose that the requirement for spatiotemporal colocalization of granzyme and perforin acts as an effective bimolecular filter to ensure target specificity.
Author Woodsworth, Daniel J
Dunsing, Valentin
Coombs, Daniel
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  givenname: Valentin
  surname: Dunsing
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  organization: Institut für Physik, Humboldt-Universität zu Berlin, Berlin, Germany
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  email: coombs@math.ubc.ca
  organization: Department of Mathematics and Institute of Applied Mathematics, University of British Columbia, Vancouver, British Columbia, Canada. Electronic address: coombs@math.ubc.ca
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References 19850042 - FEBS Lett. 2009 Dec 17;583(24):3966-73
1059096 - Proc Natl Acad Sci U S A. 1975 Aug;72(8):3111-3
10966646 - Nat Struct Biol. 2000 Sep;7(9):762-5
15388866 - Protein Sci. 2004 Oct;13(10):2825-8
12360212 - Nat Rev Immunol. 2002 Oct;2(10):735-47
20634814 - Nat Rev Immunol. 2010 Aug;10(8):568-79
16832064 - Proc Natl Acad Sci U S A. 2006 Jul 18;103(29):10985-90
21676899 - Protein Eng Des Sel. 2011 Sep;24(9):635-48
12414757 - Clin Diagn Lab Immunol. 2002 Nov;9(6):1248-52
23885110 - J Immunol. 2013 Sep 1;191(5):2328-34
21931537 - PLoS Biol. 2011 Sep;9(9):e1001152
23377437 - Blood. 2013 Apr 4;121(14):2659-68
21037563 - Nature. 2010 Nov 18;468(7322):447-51
12636192 - Physiol Meas. 2003 Feb;24(1):137-47
16461891 - Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2098-102
17006514 - Nature. 2006 Sep 28;443(7110):462-5
20536557 - Immunol Rev. 2010 May;235(1):93-104
12663867 - Physiol Rev. 2003 Apr;83(2):581-632
24357284 - Science. 2013 Dec 20;342(6165):1432-3
17124515 - Nat Rev Immunol. 2006 Dec;6(12):940-52
12955122 - Nature. 2003 Sep 4;425(6953):27-8
19673517 - J Am Chem Soc. 2009 Sep 9;131(35):12650-6
15454424 - Biophys J. 2004 Oct;87(4):2215-20
11751315 - Biophys J. 2002 Jan;82(1 Pt 1):274-84
11728337 - Immunity. 2001 Nov;15(5):751-61
17433871 - Curr Opin Immunol. 2007 Jun;19(3):301-8
10398592 - Science. 1999 Jul 9;285(5425):221-7
19256494 - J Am Chem Soc. 2009 Mar 25;131(11):3816-7
12039912 - Int Immunol. 2002 Jun;14(6):605-13
17051695 - Syst Biol (Stevenage). 2004 Dec;1(2):230-6
23055999 - Front Immunol. 2012 Sep 21;3:291
2402247 - Mol Immunol. 1990 Aug;27(8):803-7
15582485 - Semin Immunol. 2005 Feb;17(1):3-21
References_xml – reference: 21676899 - Protein Eng Des Sel. 2011 Sep;24(9):635-48
– reference: 24357284 - Science. 2013 Dec 20;342(6165):1432-3
– reference: 11751315 - Biophys J. 2002 Jan;82(1 Pt 1):274-84
– reference: 17006514 - Nature. 2006 Sep 28;443(7110):462-5
– reference: 12955122 - Nature. 2003 Sep 4;425(6953):27-8
– reference: 23055999 - Front Immunol. 2012 Sep 21;3:291
– reference: 10398592 - Science. 1999 Jul 9;285(5425):221-7
– reference: 12636192 - Physiol Meas. 2003 Feb;24(1):137-47
– reference: 12414757 - Clin Diagn Lab Immunol. 2002 Nov;9(6):1248-52
– reference: 19673517 - J Am Chem Soc. 2009 Sep 9;131(35):12650-6
– reference: 21931537 - PLoS Biol. 2011 Sep;9(9):e1001152
– reference: 20536557 - Immunol Rev. 2010 May;235(1):93-104
– reference: 20634814 - Nat Rev Immunol. 2010 Aug;10(8):568-79
– reference: 17051695 - Syst Biol (Stevenage). 2004 Dec;1(2):230-6
– reference: 16461891 - Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2098-102
– reference: 12039912 - Int Immunol. 2002 Jun;14(6):605-13
– reference: 11728337 - Immunity. 2001 Nov;15(5):751-61
– reference: 17433871 - Curr Opin Immunol. 2007 Jun;19(3):301-8
– reference: 23885110 - J Immunol. 2013 Sep 1;191(5):2328-34
– reference: 1059096 - Proc Natl Acad Sci U S A. 1975 Aug;72(8):3111-3
– reference: 23377437 - Blood. 2013 Apr 4;121(14):2659-68
– reference: 15582485 - Semin Immunol. 2005 Feb;17(1):3-21
– reference: 12663867 - Physiol Rev. 2003 Apr;83(2):581-632
– reference: 10966646 - Nat Struct Biol. 2000 Sep;7(9):762-5
– reference: 15454424 - Biophys J. 2004 Oct;87(4):2215-20
– reference: 16832064 - Proc Natl Acad Sci U S A. 2006 Jul 18;103(29):10985-90
– reference: 12360212 - Nat Rev Immunol. 2002 Oct;2(10):735-47
– reference: 21037563 - Nature. 2010 Nov 18;468(7322):447-51
– reference: 2402247 - Mol Immunol. 1990 Aug;27(8):803-7
– reference: 17124515 - Nat Rev Immunol. 2006 Dec;6(12):940-52
– reference: 19256494 - J Am Chem Soc. 2009 Mar 25;131(11):3816-7
– reference: 19850042 - FEBS Lett. 2009 Dec 17;583(24):3966-73
– reference: 15388866 - Protein Sci. 2004 Oct;13(10):2825-8
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Snippet Cytotoxic lymphocytes are key elements of the immune system that are primarily responsible for targeting cells infected with intracellular pathogens, or cells...
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SubjectTerms Animals
Granzymes - immunology
Humans
Immunological Synapses
Models, Biological
Perforin - immunology
T-Lymphocytes, Cytotoxic - immunology
Title Design Parameters for Granzyme-Mediated Cytotoxic Lymphocyte Target-Cell Killing and Specificity
URI https://www.ncbi.nlm.nih.gov/pubmed/26244730
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