BitPAl: a bit-parallel, general integer-scoring sequence alignment algorithm

Motivation: Mapping of high-throughput sequencing data and other bulk sequence comparison applications have motivated a search for high-efficiency sequence alignment algorithms. The bit-parallel approach represents individual cells in an alignment scoring matrix as bits in computer words and emulate...

Full description

Bibliographic Details

Published in:	Bioinformatics (Oxford, England) Vol. 30; no. 22; pp. 3166 - 3173
Main Authors:	Loving, Joshua, Hernandez, Yozen, Benson, Gary
Format:	Journal Article
Language:	English
Published:	England Oxford University Press 15.11.2014
Subjects:	Algorithms High-Throughput Nucleotide Sequencing Original Papers Sequence Alignment - methods Software
ISSN:	1367-4803, 1367-4811, 1367-4811
Online Access:	Get full text
Tags:	Add Tag No Tags, Be the first to tag this record!