DRAM for distilling microbial metabolism to automate the curation of microbiome function

Microbial and viral communities transform the chemistry of Earth's ecosystems, yet the specific reactions catalyzed by these biological engines are hard to decode due to the absence of a scalable, metabolically resolved, annotation software. Here, we present DRAM (Distilled and Refined Annotati...

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Bibliographic Details

Published in:	Nucleic acids research Vol. 48; no. 16; pp. 8883 - 8900
Main Authors:	Shaffer, Michael, Borton, Mikayla A, McGivern, Bridget B, Zayed, Ahmed A, La Rosa, Sabina Leanti, Solden, Lindsey M, Liu, Pengfei, Narrowe, Adrienne B, Rodríguez-Ramos, Josué, Bolduc, Benjamin, Gazitúa, M Consuelo, Daly, Rebecca A, Smith, Garrett J, Vik, Dean R, Pope, Phil B, Sullivan, Matthew B, Roux, Simon, Wrighton, Kelly C
Format:	Journal Article
Language:	English
Published:	England Oxford University Press 18.09.2020
Subjects:	Bacteria - classification BASIC BIOLOGICAL SCIENCES Computational Biology Computational Methods Gastrointestinal Microbiome Genomics - methods Humans Metabolomics - methods Metagenome Molecular Sequence Annotation - methods Software Soil Microbiology Viruses - classification
ISSN:	0305-1048, 1362-4962, 1362-4962
Online Access:	Get full text
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