Complete genome sequence of a new circular DNA virus from grapevine

A novel circular DNA virus sequence is reported from grapevine. The corresponding genomic organization, coding potential, and conserved origin of replication are similar to those of members of the family Geminiviridae, but the genome of 3,206 nucleotides is 4% larger than the largest reported gemini...

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Vydáno v:Journal of virology Ročník 86; číslo 14; s. 7715
Hlavní autoři: Krenz, Björn, Thompson, Jeremy R, Fuchs, Marc, Perry, Keith L
Médium: Journal Article
Jazyk:angličtina
Vydáno: United States 01.07.2012
Témata:
Amino Acid Sequence
Base Sequence
Capsid Proteins - chemistry
Capsid Proteins - genetics
DNA Viruses - genetics
DNA, Circular
Geminiviridae - genetics
Genome, Viral
Molecular Sequence Data
Open Reading Frames - genetics
Plant Viruses - genetics
Sequence Analysis, DNA
Vitis - virology
ISSN:1098-5514, 1098-5514
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Abstract A novel circular DNA virus sequence is reported from grapevine. The corresponding genomic organization, coding potential, and conserved origin of replication are similar to those of members of the family Geminiviridae, but the genome of 3,206 nucleotides is 4% larger than the largest reported geminiviral genome and shares only 50% overall sequence identity.
AbstractList A novel circular DNA virus sequence is reported from grapevine. The corresponding genomic organization, coding potential, and conserved origin of replication are similar to those of members of the family Geminiviridae, but the genome of 3,206 nucleotides is 4% larger than the largest reported geminiviral genome and shares only 50% overall sequence identity.
A novel circular DNA virus sequence is reported from grapevine. The corresponding genomic organization, coding potential, and conserved origin of replication are similar to those of members of the family Geminiviridae, but the genome of 3,206 nucleotides is 4% larger than the largest reported geminiviral genome and shares only 50% overall sequence identity.A novel circular DNA virus sequence is reported from grapevine. The corresponding genomic organization, coding potential, and conserved origin of replication are similar to those of members of the family Geminiviridae, but the genome of 3,206 nucleotides is 4% larger than the largest reported geminiviral genome and shares only 50% overall sequence identity.
Author Krenz, Björn
Perry, Keith L
Thompson, Jeremy R
Fuchs, Marc
Author_xml – sequence: 1
  givenname: Björn
  surname: Krenz
  fullname: Krenz, Björn
  organization: Department of Plant Pathology and Plant-Microbe Biology, Cornell University, Ithaca, NY, USA
– sequence: 2
  givenname: Jeremy R
  surname: Thompson
  fullname: Thompson, Jeremy R
– sequence: 3
  givenname: Marc
  surname: Fuchs
  fullname: Fuchs, Marc
– sequence: 4
  givenname: Keith L
  surname: Perry
  fullname: Perry, Keith L
BackLink https://www.ncbi.nlm.nih.gov/pubmed/22733880$$D View this record in MEDLINE/PubMed
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– reference: 9450342 - Plant J. 1997 Dec;12(6):1285-97
– reference: 9254694 - Nucleic Acids Res. 1997 Sep 1;25(17):3389-402
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Snippet A novel circular DNA virus sequence is reported from grapevine. The corresponding genomic organization, coding potential, and conserved origin of replication...
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SubjectTerms Amino Acid Sequence
Base Sequence
Capsid Proteins - chemistry
Capsid Proteins - genetics
DNA Viruses - genetics
DNA, Circular
Geminiviridae - genetics
Genome, Viral
Molecular Sequence Data
Open Reading Frames - genetics
Plant Viruses - genetics
Sequence Analysis, DNA
Vitis - virology
Title Complete genome sequence of a new circular DNA virus from grapevine
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