Virome of Three Termite Species from Southern Vietnam

Modern metagenomic approaches enable the effective discovery of novel viruses in previously unexplored organisms. Termites are significant ecosystem converters and influencers. As with the majority of tropical forest insects, termites are studied insufficiently, and termite virome remains especially...

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Published in:Viruses Vol. 14; no. 5; p. 860
Main Authors: Litov, Alexander G., Zueva, Anna I., Tiunov, Alexei V., Van Thinh, Nguyen, Belyaeva, Natalia V., Karganova, Galina G.
Format: Journal Article
Language:English
Published: Switzerland MDPI AG 21.04.2022
MDPI
Subjects:
Animals
Basidiocarps
Chuviridae
Dagavirus
Dagazvirus
Deltavirus
Ecosystem
Forests
Genomes
Homology
Insects
Isoptera
Laboratories
Metagenomics
National parks
Phylogenetics
Phylogeny
Proteins
RNA polymerase
RNA Viruses
Termites
Tropical forests
Vietnam
Virome
Viruses
Vietnam
virome
metagenomics
Isoptera
social insects
tropical forest
Deltavirus
Chuviridae
Dagazvirus
ISSN:1999-4915, 1999-4915
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Abstract Modern metagenomic approaches enable the effective discovery of novel viruses in previously unexplored organisms. Termites are significant ecosystem converters and influencers. As with the majority of tropical forest insects, termites are studied insufficiently, and termite virome remains especially understudied. Here, we studied the virome of lichenophagous and mycophagous termites (Hospitalitermes bicolor, Macrotermes carbonarius and Odontotermes wallonensis) collected in the Cat Tien National Park (Vietnam). We assembled four full genomes of novel viruses related to Solemoviridae, Lispiviridae, Polycipiviridae and Kolmioviridae. We also found several contigs with relation to Chuviridae and Deltaflexiviridae that did not correspond to complete virus genomes. All the novel viruses clustered phylogenetically with previously identified viruses of the termites. Deltaflexi-like contigs were identified in the fungi-cultivating M. carbonarius and showed homology with viruses recently discovered in the edible basidiomycete mushrooms.
AbstractList Modern metagenomic approaches enable the effective discovery of novel viruses in previously unexplored organisms. Termites are significant ecosystem converters and influencers. As with the majority of tropical forest insects, termites are studied insufficiently, and termite virome remains especially understudied. Here, we studied the virome of lichenophagous and mycophagous termites (Hospitalitermes bicolor, Macrotermes carbonarius and Odontotermes wallonensis) collected in the Cat Tien National Park (Vietnam). We assembled four full genomes of novel viruses related to Solemoviridae, Lispiviridae, Polycipiviridae and Kolmioviridae. We also found several contigs with relation to Chuviridae and Deltaflexiviridae that did not correspond to complete virus genomes. All the novel viruses clustered phylogenetically with previously identified viruses of the termites. Deltaflexi-like contigs were identified in the fungi-cultivating M. carbonarius and showed homology with viruses recently discovered in the edible basidiomycete mushrooms.
Modern metagenomic approaches enable the effective discovery of novel viruses in previously unexplored organisms. Termites are significant ecosystem converters and influencers. As with the majority of tropical forest insects, termites are studied insufficiently, and termite virome remains especially understudied. Here, we studied the virome of lichenophagous and mycophagous termites ( , and ) collected in the Cat Tien National Park (Vietnam). We assembled four full genomes of novel viruses related to , , and . We also found several contigs with relation to and that did not correspond to complete virus genomes. All the novel viruses clustered phylogenetically with previously identified viruses of the termites. Deltaflexi-like contigs were identified in the fungi-cultivating and showed homology with viruses recently discovered in the edible basidiomycete mushrooms.
Modern metagenomic approaches enable the effective discovery of novel viruses in previously unexplored organisms. Termites are significant ecosystem converters and influencers. As with the majority of tropical forest insects, termites are studied insufficiently, and termite virome remains especially understudied. Here, we studied the virome of lichenophagous and mycophagous termites (Hospitalitermes bicolor, Macrotermes carbonarius and Odontotermes wallonensis) collected in the Cat Tien National Park (Vietnam). We assembled four full genomes of novel viruses related to Solemoviridae, Lispiviridae, Polycipiviridae and Kolmioviridae. We also found several contigs with relation to Chuviridae and Deltaflexiviridae that did not correspond to complete virus genomes. All the novel viruses clustered phylogenetically with previously identified viruses of the termites. Deltaflexi-like contigs were identified in the fungi-cultivating M. carbonarius and showed homology with viruses recently discovered in the edible basidiomycete mushrooms.Modern metagenomic approaches enable the effective discovery of novel viruses in previously unexplored organisms. Termites are significant ecosystem converters and influencers. As with the majority of tropical forest insects, termites are studied insufficiently, and termite virome remains especially understudied. Here, we studied the virome of lichenophagous and mycophagous termites (Hospitalitermes bicolor, Macrotermes carbonarius and Odontotermes wallonensis) collected in the Cat Tien National Park (Vietnam). We assembled four full genomes of novel viruses related to Solemoviridae, Lispiviridae, Polycipiviridae and Kolmioviridae. We also found several contigs with relation to Chuviridae and Deltaflexiviridae that did not correspond to complete virus genomes. All the novel viruses clustered phylogenetically with previously identified viruses of the termites. Deltaflexi-like contigs were identified in the fungi-cultivating M. carbonarius and showed homology with viruses recently discovered in the edible basidiomycete mushrooms.
Author Zueva, Anna I.
Tiunov, Alexei V.
Belyaeva, Natalia V.
Karganova, Galina G.
Litov, Alexander G.
Van Thinh, Nguyen
AuthorAffiliation 5 Institute for Translational Medicine and Biotechnology, Sechenov University, 119991 Moscow, Russia
3 Southern Branch, Russian–Vietnamese Tropical Scientific and Technological Center, Ho Chi Minh City 70001, Vietnam; thinh39b@gmail.com
1 Laboratory of Biology of Arboviruses, FSASI Chumakov Federal Scientific Center for Research and Development of Immune-and-Biological Products of RAS, 108819 Moscow, Russia; novosti-wxo@yandex.ru
2 A.N. Severtsov Institute of Ecology and Evolution, 119071 Moscow, Russia; aizueva.ecologist@gmail.com (A.I.Z.); a_tiunov@mail.ru (A.V.T.)
4 Division of Entomology, Faculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia; natalia.belyaeva45@gmail.com
6 Division of Virology, Faculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia
AuthorAffiliation_xml – name: 1 Laboratory of Biology of Arboviruses, FSASI Chumakov Federal Scientific Center for Research and Development of Immune-and-Biological Products of RAS, 108819 Moscow, Russia; novosti-wxo@yandex.ru
– name: 2 A.N. Severtsov Institute of Ecology and Evolution, 119071 Moscow, Russia; aizueva.ecologist@gmail.com (A.I.Z.); a_tiunov@mail.ru (A.V.T.)
– name: 6 Division of Virology, Faculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia
– name: 4 Division of Entomology, Faculty of Biology, Lomonosov Moscow State University, 119234 Moscow, Russia; natalia.belyaeva45@gmail.com
– name: 5 Institute for Translational Medicine and Biotechnology, Sechenov University, 119991 Moscow, Russia
– name: 3 Southern Branch, Russian–Vietnamese Tropical Scientific and Technological Center, Ho Chi Minh City 70001, Vietnam; thinh39b@gmail.com
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  fullname: Belyaeva, Natalia V.
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  givenname: Galina G.
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BackLink https://www.ncbi.nlm.nih.gov/pubmed/35632601$$D View this record in MEDLINE/PubMed
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Issue 5
Keywords virome
metagenomics
Isoptera
social insects
tropical forest
Deltavirus
Chuviridae
Dagazvirus
Language English
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Snippet Modern metagenomic approaches enable the effective discovery of novel viruses in previously unexplored organisms. Termites are significant ecosystem converters...
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StartPage 860
SubjectTerms Animals
Basidiocarps
Chuviridae
Dagavirus
Dagazvirus
Deltavirus
Ecosystem
Forests
Genomes
Homology
Insects
Isoptera
Laboratories
Metagenomics
National parks
Phylogenetics
Phylogeny
Proteins
RNA polymerase
RNA Viruses
Termites
Tropical forests
Vietnam
Virome
Viruses
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Title Virome of Three Termite Species from Southern Vietnam
URI https://www.ncbi.nlm.nih.gov/pubmed/35632601
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