Naturally selecting solutions The use of genetic algorithms in bioinformatics

For decades, computer scientists have looked to nature for biologically inspired solutions to computational problems; ranging from robotic control to scheduling optimization. Paradoxically, as we move deeper into the post-genomics era, the reverse is occurring, as biologists and bioinformaticians lo...

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Veröffentlicht in:Bioengineered Jg. 4; H. 5; S. 266 - 278
Hauptverfasser: Manning, Timmy, Sleator, Roy D, Walsh, Paul
Format: Journal Article
Sprache:Englisch
Veröffentlicht: United States Taylor & Francis 01.09.2013
Landes Bioscience
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ISSN:2165-5979, 2165-5987, 2165-5987
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Abstract For decades, computer scientists have looked to nature for biologically inspired solutions to computational problems; ranging from robotic control to scheduling optimization. Paradoxically, as we move deeper into the post-genomics era, the reverse is occurring, as biologists and bioinformaticians look to computational techniques, to solve a variety of biological problems. One of the most common biologically inspired techniques are genetic algorithms (GAs), which take the Darwinian concept of natural selection as the driving force behind systems for solving real world problems, including those in the bioinformatics domain. Herein, we provide an overview of genetic algorithms and survey some of the most recent applications of this approach to bioinformatics based problems.
AbstractList For decades, computer scientists have looked to nature for biologically inspired solutions to computational problems; ranging from robotic control to scheduling optimization. Paradoxically, as we move deeper into the post-genomics era, the reverse is occurring, as biologists and bioinformaticians look to computational techniques, to solve a variety of biological problems. One of the most common biologically inspired techniques are genetic algorithms (GAs), which take the Darwinian concept of natural selection as the driving force behind systems for solving real world problems, including those in the bioinformatics domain. Herein, we provide an overview of genetic algorithms and survey some of the most recent applications of this approach to bioinformatics based problems.For decades, computer scientists have looked to nature for biologically inspired solutions to computational problems; ranging from robotic control to scheduling optimization. Paradoxically, as we move deeper into the post-genomics era, the reverse is occurring, as biologists and bioinformaticians look to computational techniques, to solve a variety of biological problems. One of the most common biologically inspired techniques are genetic algorithms (GAs), which take the Darwinian concept of natural selection as the driving force behind systems for solving real world problems, including those in the bioinformatics domain. Herein, we provide an overview of genetic algorithms and survey some of the most recent applications of this approach to bioinformatics based problems.
For decades, computer scientists have looked to nature for biologically inspired solutions to computational problems; ranging from robotic control to scheduling optimization. Paradoxically, as we move deeper into the post-genomics era, the reverse is occurring, as biologists and bioinformaticians look to computational techniques, to solve a variety of biological problems. One of the most common biologically inspired techniques are genetic algorithms (GAs), which take the Darwinian concept of natural selection as the driving force behind systems for solving real world problems, including those in the bioinformatics domain. Herein, we provide an overview of genetic algorithms and survey some of the most recent applications of this approach to bioinformatics based problems.
Author Manning, Timmy
Sleator, Roy D
Walsh, Paul
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Issue 5
Keywords genetic algorithm
optimization
protein structure prediction
multiple sequence alignment
Language English
License open-access: http://creativecommons.org/licenses/by-nc/3.0/: This is an open-access article licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported License. The article may be redistributed, reproduced, and reused for non-commercial purposes, provided the original source is properly cited.
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Snippet For decades, computer scientists have looked to nature for biologically inspired solutions to computational problems; ranging from robotic control to...
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SubjectTerms Algorithms
Computational Biology - methods
Computer Simulation
Crossing Over, Genetic
genetic algorithm
Genetic Fitness
Genotype
Models, Genetic
multiple sequence alignment
optimization
Phenotype
protein structure prediction
Selection, Genetic
Sequence Alignment
Subtitle The use of genetic algorithms in bioinformatics
Title Naturally selecting solutions
URI https://www.tandfonline.com/doi/abs/10.4161/bioe.23041
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