CLARIFY: cell–cell interaction and gene regulatory network refinement from spatially resolved transcriptomics

Abstract Motivation Gene regulatory networks (GRNs) in a cell provide the tight feedback needed to synchronize cell actions. However, genes in a cell also take input from, and provide signals to other neighboring cells. These cell–cell interactions (CCIs) and the GRNs deeply influence each other. Ma...

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Bibliographic Details

Published in:	Bioinformatics (Oxford, England) Vol. 39; no. Supplement_1; pp. i484 - i493
Main Authors:	Bafna, Mihir, Li, Hechen, Zhang, Xiuwei
Format:	Journal Article
Language:	English
Published:	England Oxford University Press 30.06.2023
Subjects:	Benchmarking Cell Communication Gene Expression Profiling Gene Regulatory Networks Systems Biology and Networks Transcriptome
ISSN:	1367-4803, 1367-4811, 1367-4811
Online Access:	Get full text
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