Halcyon: an accurate basecaller exploiting an encoder–decoder model with monotonic attention

Abstract Motivation In recent years, nanopore sequencing technology has enabled inexpensive long-read sequencing, which promises reads longer than a few thousand bases. Such long-read sequences contribute to the precise detection of structural variations and accurate haplotype phasing. However, deci...

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Bibliographic Details

Published in:	Bioinformatics Vol. 37; no. 9; pp. 1211 - 1217
Main Authors:	Konishi, Hiroki, Yamaguchi, Rui, Yamaguchi, Kiyoshi, Furukawa, Yoichi, Imoto, Seiya
Format:	Journal Article
Language:	English
Published:	England Oxford University Press 09.06.2021
Subjects:	DNA High-Throughput Nucleotide Sequencing Humans Nanopore Sequencing Nanopores Original Papers Sequence Analysis, DNA Software
ISSN:	1367-4803, 1367-4811, 1460-2059, 1367-4811
Online Access:	Get full text
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