Introducing the Lipidomics Minimal Reporting Checklist
The rapid increase in lipidomic data has triggered a community-based movement to develop guidelines and minimum requirements for generating, reporting and publishing lipidomic data. The creation of a dynamic checklist summarizing key details of lipidomic analyses using a common language has the pote...
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| Vydáno v: | Nature metabolism Ročník 4; číslo 9; s. 1086 - 1088 |
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| Médium: | Journal Article |
| Jazyk: | angličtina |
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London
Nature Publishing Group UK
01.09.2022
Nature Publishing Group |
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| ISSN: | 2522-5812, 2522-5812 |
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| Abstract | The rapid increase in lipidomic data has triggered a community-based movement to develop guidelines and minimum requirements for generating, reporting and publishing lipidomic data. The creation of a dynamic checklist summarizing key details of lipidomic analyses using a common language has the potential to harmonize the field by improving both traceability and reproducibility. |
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| AbstractList | The rapid increase in lipidomic data has triggered a community-based movement to develop guidelines and minimum requirements for generating, reporting and publishing lipidomic data. The creation of a dynamic checklist summarizing key details of lipidomic analyses using a common language has the potential to harmonize the field by improving both traceability and reproducibility. |
| Author | Brügger, Britta Baker, Erin S. Wolrab, Denise Köfeler, Harald C. Fedorova, Maria O’Donnell, Valerie B. Ekroos, Kim Ulmer, Candice Z. Ejsing, Christer S. Shevchenko, Andrej Wenk, Markus R. Arita, Masanori Bertrand-Michel, Justine Xia, Yu Liebisch, Gerhard Aoki, Junken Arita, Makoto Koelmel, Jeremy P. Hoffmann, Nils Holčapek, Michal Saigusa, Daisuke Ellis, Shane R. Mitchell, Todd W. Witting, Michael Bowden, John A. Griffiths, William J. Schwudke, Dominik McDonald, Jeffrey G. Hartler, Jürgen Kopczynski, Dominik Han, Xianlin Ahrends, Robert |
| Author_xml | – sequence: 1 givenname: Jeffrey G. orcidid: 0000-0003-1570-4142 surname: McDonald fullname: McDonald, Jeffrey G. organization: Center for Human Nutrition and Department of Molecular Genetics, UT Southwestern Medical Center – sequence: 2 givenname: Christer S. orcidid: 0000-0003-4963-0276 surname: Ejsing fullname: Ejsing, Christer S. organization: Department of Biochemistry and Molecular Biology, VILLUM Center for Bioanalytical Sciences, University of Southern Denmark, Cell Biology and Biophysics Unit, European Molecular Biology Laboratory – sequence: 3 givenname: Dominik surname: Kopczynski fullname: Kopczynski, Dominik organization: Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna – sequence: 4 givenname: Michal orcidid: 0000-0003-3978-1249 surname: Holčapek fullname: Holčapek, Michal organization: Department of Analytical Chemistry, Faculty of Chemical Technology, University of Pardubice – sequence: 5 givenname: Junken surname: Aoki fullname: Aoki, Junken organization: Graduate School of Pharmaceutical Sciences, Tohoku University, Graduate School of Pharmaceutical Sciences, University of Tokyo – sequence: 6 givenname: Makoto orcidid: 0000-0001-9902-0463 surname: Arita fullname: Arita, Makoto organization: RIKEN, Center for Integrative Medical Sciences – sequence: 7 givenname: Masanori orcidid: 0000-0001-6706-0487 surname: Arita fullname: Arita, Masanori organization: National Institute of Genetics – sequence: 8 givenname: Erin S. orcidid: 0000-0001-5246-2213 surname: Baker fullname: Baker, Erin S. organization: Department of Chemistry, North Carolina State University – sequence: 9 givenname: Justine surname: Bertrand-Michel fullname: Bertrand-Michel, Justine organization: MetaboHUB-Metatoul, National Infrastructure of Metabolomics and Fluxomics, Inserm I2MC – sequence: 10 givenname: John A. surname: Bowden fullname: Bowden, John A. organization: Center for Environmental and Human Toxicology, Department of Physiological Sciences, College of Veterinary Medicine, University of Florida – sequence: 11 givenname: Britta surname: Brügger fullname: Brügger, Britta organization: Heidelberg University Biochemistry Center (BZH), University of Heidelberg – sequence: 12 givenname: Shane R. orcidid: 0000-0002-3326-5991 surname: Ellis fullname: Ellis, Shane R. organization: Molecular Horizons and School of Chemistry and Molecular Bioscience, University of Wollongong, Illawarra Heath and Medical Research Institute – sequence: 13 givenname: Maria surname: Fedorova fullname: Fedorova, Maria organization: Center for Membrane Biochemistry and Lipid Research, Faculty of Medicine Carl Gustav Carus of TU Dresden – sequence: 14 givenname: William J. orcidid: 0000-0002-4129-6616 surname: Griffiths fullname: Griffiths, William J. organization: Swansea University Medical School – sequence: 15 givenname: Xianlin orcidid: 0000-0002-8615-2413 surname: Han fullname: Han, Xianlin organization: Barshop Institute for Longevity and Aging Studies, University of Texas Health Science Center at San Antonio, Department of Medicine - Diabetes, University of Texas Health Science Center at San Antonio – sequence: 16 givenname: Jürgen orcidid: 0000-0002-1095-6458 surname: Hartler fullname: Hartler, Jürgen organization: Institute of Pharmaceutical Sciences, University of Graz, Field of Excellence BioHealth – University of Graz – sequence: 17 givenname: Nils orcidid: 0000-0002-6540-6875 surname: Hoffmann fullname: Hoffmann, Nils organization: Center for Biotechnology (CeBiTec), Bielefeld University – sequence: 18 givenname: Jeremy P. surname: Koelmel fullname: Koelmel, Jeremy P. organization: Department of Environmental Health Sciences, Yale School of Public Health – sequence: 19 givenname: Harald C. orcidid: 0000-0002-2725-9616 surname: Köfeler fullname: Köfeler, Harald C. organization: Core Facility Mass Spectrometry and Lipidomics, ZMF, Medical University of Graz – sequence: 20 givenname: Todd W. surname: Mitchell fullname: Mitchell, Todd W. organization: Illawarra Heath and Medical Research Institute – sequence: 21 givenname: Valerie B. orcidid: 0000-0003-4089-8460 surname: O’Donnell fullname: O’Donnell, Valerie B. organization: Systems Immunity Research Institute, School of Medicine, Cardiff University – sequence: 22 givenname: Daisuke surname: Saigusa fullname: Saigusa, Daisuke organization: Department of Integrative Genomics, Tohoku Medical Megabank Organization, Tohoku University – sequence: 23 givenname: Dominik orcidid: 0000-0002-1379-9451 surname: Schwudke fullname: Schwudke, Dominik organization: Research Center Borstel - Leibniz Lung Center, German Center for Infection Research, Thematic Translational Unit Tuberculosis, Partner Site Hamburg-Lübeck-Borstel-Riems, German Center for Lung Research (DZL), Airway Research Center North (ARCN), Research Center Borstel, Leibniz Lung Center – sequence: 24 givenname: Andrej surname: Shevchenko fullname: Shevchenko, Andrej organization: Max-Planck-Institute of Molecular Cell Biology and Genetics – sequence: 25 givenname: Candice Z. surname: Ulmer fullname: Ulmer, Candice Z. organization: Office of Public Health Science, Food Safety and Inspection Service, US Department of Agriculture – sequence: 26 givenname: Markus R. surname: Wenk fullname: Wenk, Markus R. organization: Singapore Lipidomics Incubator (SLING), Department of Biochemistry, YLL School of Medicine, National University of Singapore – sequence: 27 givenname: Michael orcidid: 0000-0002-1462-4426 surname: Witting fullname: Witting, Michael organization: Metabolomics and Proteomics Core, Helmholtz Zentrum München – sequence: 28 givenname: Denise orcidid: 0000-0003-2664-3912 surname: Wolrab fullname: Wolrab, Denise organization: Department of Analytical Chemistry, Faculty of Chemical Technology, University of Pardubice – sequence: 29 givenname: Yu surname: Xia fullname: Xia, Yu organization: MOE Key Laboratory of Bioorganic Phosphorus Chemistry & Chemical Biology, Department of Chemistry, Tsinghua University – sequence: 30 givenname: Robert surname: Ahrends fullname: Ahrends, Robert email: robert.ahrends@lipidomics.at organization: Department of Analytical Chemistry, Faculty of Chemistry, University of Vienna – sequence: 31 givenname: Gerhard orcidid: 0000-0003-4886-0811 surname: Liebisch fullname: Liebisch, Gerhard email: Gerhard.Liebisch@klinik.uni-regensburg.de organization: Institute of Clinical Chemistry and Laboratory Medicine, University of Regensburg – sequence: 32 givenname: Kim orcidid: 0000-0001-6810-4736 surname: Ekroos fullname: Ekroos, Kim email: kim@lipidomicsconsulting.com organization: Lipidomics Consulting Ltd |
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| Cites_doi | 10.1016/j.bbalip.2017.02.013 10.1038/s41467-021-24984-y 10.1038/s42255-019-0094-z |
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| References | LiebischGNat. Metab.2019174574710.1038/s42255-019-0094-z LiebischGEkroosKHermanssonMEjsingCSBiochim. Biophys. Acta201718627477511:CAS:528:DC%2BC2sXjvVajsbk%3D10.1016/j.bbalip.2017.02.013 KöfelerHCNat. Commun.20211210.1038/s41467-021-24984-y HC Köfeler (628_CR2) 2021; 12 G Liebisch (628_CR3) 2019; 1 G Liebisch (628_CR1) 2017; 1862 |
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| Title | Introducing the Lipidomics Minimal Reporting Checklist |
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