PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format files

Abstract Motivation Linkage disequilibrium (LD) decay is of great interest in population genetic studies. However, no tool is available now to do LD decay analysis from variant call format (VCF) files directly. In addition, generation of pair-wise LD measurements for whole genome SNPs usually result...

Full description

Bibliographic Details

Published in:	Bioinformatics Vol. 35; no. 10; pp. 1786 - 1788
Main Authors:	Zhang, Chi, Dong, Shan-Shan, Xu, Jun-Yang, He, Wei-Ming, Yang, Tie-Lin
Format:	Journal Article
Language:	English
Published:	England Oxford University Press 15.05.2019
Subjects:	bioinformatics computer software genome linkage disequilibrium
ISSN:	1367-4803, 1367-4811, 1460-2059, 1367-4811
Online Access:	Get full text
Tags:	Add Tag No Tags, Be the first to tag this record!