Mycoplasma detection in a historical arbovirus repository: Commercial kit comparison and implications for improved repository management

•Mycoplasma quality control testing is vital for continued maintenance of historical virus repositories.•Virus preparation (replication host) influences mycoplasma contamination result.•Specific mycoplasma species are maintained within a repository. The Centers for Disease Control and Prevention, Ar...

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Vydáno v:	Journal of virological methods Ročník 276; s. 113769
Hlavní autoři:	Russell, Brandy J., Horiuchi, Kalanthe, Velez, Jason O., Goodman, Christin H., Johnson, Barbara W.
Médium:	Journal Article
Jazyk:	angličtina
Vydáno:	Netherlands Elsevier B.V 01.02.2020
Témata:	Animals Arbovirus Arboviruses Biological Specimen Banks - standards brain cell culture Cell Culture Techniques Cell Line Centers for Disease Control and Prevention DNA, Bacterial - genetics Humans invertebrates mice Mycoplasma Mycoplasma - isolation & purification phenotype polymerase chain reaction Quality Control Repository RNA, Viral - genetics suckling tissue culture unassigned viruses viral growth Virology - instrumentation Virology - methods Mycoplasma Arbovirus Repository
ISSN:	0166-0934, 1879-0984, 1879-0984
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Abstract	•Mycoplasma quality control testing is vital for continued maintenance of historical virus repositories.•Virus preparation (replication host) influences mycoplasma contamination result.•Specific mycoplasma species are maintained within a repository. The Centers for Disease Control and Prevention, Arbovirus Reference Collection (ARC) contains viral isolates from both environmental and human sources that are maintained in the laboratory through passage in suckling mouse brain and/or vertebrate and invertebrate cell culture. There has been increased concern regarding the effect of mycoplasma contamination on virus growth and its impact on research and phenotypic analysis. Therefore, quality control testing of virus preparations has become a routine part of the ARC quality assurance program. We compared the performance of three kits - the PCR Mycoplasma Detection Kit (ABM), the VenorGem Mycoplasma Detection Kit (Sigma), and the MycoAlert Mycoplasma Detection Kit (Lonza) - against a reference mycoplasma detection assay from the American Tissue Culture Collection (ATCC) using 744 virus preparations in the ARC, representing 721 unique viruses comprising twelve families and unclassified viruses. We found the ABM kit had the highest sensitivity and specificity, followed by the Sigma kit and Lonza kit, when compared to the ATCC kit. An increase in false positives was observed for the Lonza kit for preparations recently passaged in suckling mouse. Our data supports previously reported observations; that once introduced a specific species of mycoplasma is maintained within a lab.
AbstractList	The Centers for Disease Control and Prevention, Arbovirus Reference Collection (ARC) contains viral isolates from both environmental and human sources that are maintained in the laboratory through passage in suckling mouse brain and/or vertebrate and invertebrate cell culture. There has been increased concern regarding the effect of mycoplasma contamination on virus growth and its impact on research and phenotypic analysis. Therefore, quality control testing of virus preparations has become a routine part of the ARC quality assurance program. We compared the performance of three kits - the PCR Mycoplasma Detection Kit (ABM), the VenorGem Mycoplasma Detection Kit (Sigma), and the MycoAlert Mycoplasma Detection Kit (Lonza) - against a reference mycoplasma detection assay from the American Tissue Culture Collection (ATCC) using 744 virus preparations in the ARC, representing 721 unique viruses comprising twelve families and unclassified viruses. We found the ABM kit had the highest sensitivity and specificity, followed by the Sigma kit and Lonza kit, when compared to the ATCC kit. An increase in false positives was observed for the Lonza kit for preparations recently passaged in suckling mouse. Our data supports previously reported observations; that once introduced a specific species of mycoplasma is maintained within a lab. The Centers for Disease Control and Prevention, Arbovirus Reference Collection (ARC) contains viral isolates from both environmental and human sources that are maintained in the laboratory through passage in suckling mouse brain and/or vertebrate and invertebrate cell culture. There has been increased concern regarding the effect of mycoplasma contamination on virus growth and its impact on research and phenotypic analysis. Therefore, quality control testing of virus preparations has become a routine part of the ARC quality assurance program. We compared the performance of three kits - the PCR Mycoplasma Detection Kit (ABM), the VenorGem Mycoplasma Detection Kit (Sigma), and the MycoAlert Mycoplasma Detection Kit (Lonza) - against a reference mycoplasma detection assay from the American Tissue Culture Collection (ATCC) using 744 virus preparations in the ARC, representing 721 unique viruses comprising twelve families and unclassified viruses. We found the ABM kit had the highest sensitivity and specificity, followed by the Sigma kit and Lonza kit, when compared to the ATCC kit. An increase in false positives was observed for the Lonza kit for preparations recently passaged in suckling mouse. Our data supports previously reported observations; that once introduced a specific species of mycoplasma is maintained within a lab.The Centers for Disease Control and Prevention, Arbovirus Reference Collection (ARC) contains viral isolates from both environmental and human sources that are maintained in the laboratory through passage in suckling mouse brain and/or vertebrate and invertebrate cell culture. There has been increased concern regarding the effect of mycoplasma contamination on virus growth and its impact on research and phenotypic analysis. Therefore, quality control testing of virus preparations has become a routine part of the ARC quality assurance program. We compared the performance of three kits - the PCR Mycoplasma Detection Kit (ABM), the VenorGem Mycoplasma Detection Kit (Sigma), and the MycoAlert Mycoplasma Detection Kit (Lonza) - against a reference mycoplasma detection assay from the American Tissue Culture Collection (ATCC) using 744 virus preparations in the ARC, representing 721 unique viruses comprising twelve families and unclassified viruses. We found the ABM kit had the highest sensitivity and specificity, followed by the Sigma kit and Lonza kit, when compared to the ATCC kit. An increase in false positives was observed for the Lonza kit for preparations recently passaged in suckling mouse. Our data supports previously reported observations; that once introduced a specific species of mycoplasma is maintained within a lab. •Mycoplasma quality control testing is vital for continued maintenance of historical virus repositories.•Virus preparation (replication host) influences mycoplasma contamination result.•Specific mycoplasma species are maintained within a repository. The Centers for Disease Control and Prevention, Arbovirus Reference Collection (ARC) contains viral isolates from both environmental and human sources that are maintained in the laboratory through passage in suckling mouse brain and/or vertebrate and invertebrate cell culture. There has been increased concern regarding the effect of mycoplasma contamination on virus growth and its impact on research and phenotypic analysis. Therefore, quality control testing of virus preparations has become a routine part of the ARC quality assurance program. We compared the performance of three kits - the PCR Mycoplasma Detection Kit (ABM), the VenorGem Mycoplasma Detection Kit (Sigma), and the MycoAlert Mycoplasma Detection Kit (Lonza) - against a reference mycoplasma detection assay from the American Tissue Culture Collection (ATCC) using 744 virus preparations in the ARC, representing 721 unique viruses comprising twelve families and unclassified viruses. We found the ABM kit had the highest sensitivity and specificity, followed by the Sigma kit and Lonza kit, when compared to the ATCC kit. An increase in false positives was observed for the Lonza kit for preparations recently passaged in suckling mouse. Our data supports previously reported observations; that once introduced a specific species of mycoplasma is maintained within a lab.
ArticleNumber	113769
Author	Goodman, Christin H. Russell, Brandy J. Horiuchi, Kalanthe Velez, Jason O. Johnson, Barbara W.
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Cites_doi	10.1111/j.1749-6632.1973.tb45654.x 10.1128/AEM.67.3.1284-1291.2001 10.1002/sim.7654 10.32607/20758251-2014-6-3-41-51 10.1002/(SICI)1097-0258(20000315)19:5<649::AID-SIM371>3.0.CO;2-H 10.1371/journal.pone.0033237 10.1023/A:1022913015916 10.1128/JVI.01167-09 10.1099/00222615-3-2-259 10.3389/fcimb.2017.00440 10.1590/S1517-83822014000400048
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SubjectTerms	Animals Arbovirus Arboviruses Biological Specimen Banks - standards brain cell culture Cell Culture Techniques Cell Line Centers for Disease Control and Prevention DNA, Bacterial - genetics Humans invertebrates mice Mycoplasma Mycoplasma - isolation & purification phenotype polymerase chain reaction Quality Control Repository RNA, Viral - genetics suckling tissue culture unassigned viruses viral growth Virology - instrumentation Virology - methods
Title	Mycoplasma detection in a historical arbovirus repository: Commercial kit comparison and implications for improved repository management
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