Optimizing Phylogenomics with Rapidly Evolving Long Exons: Comparison with Anchored Hybrid Enrichment and Ultraconserved Elements

Abstract Marker selection has emerged as an important component of phylogenomic study design due to rising concerns of the effects of gene tree estimation error, model misspecification, and data-type differences. Researchers must balance various trade-offs associated with locus length and evolutiona...

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Veröffentlicht in:	Molecular biology and evolution Jg. 37; H. 3; S. 904 - 922
Hauptverfasser:	Karin, Benjamin R, Gamble, Tony, Jackman, Todd R
Format:	Journal Article
Sprache:	Englisch
Veröffentlicht:	United States Oxford University Press 01.03.2020
Schlagworte:	Animals Bayes Theorem Bayesian analysis Biology Computational Biology - methods Datasets Evolution Evolution, Molecular Exons Genetic diversity Genetic Loci Genomes Lizards Methods Optimization Orthology Phylogenetics Phylogeny RAG1 protein Reptiles Reptiles - classification Reptiles - genetics Sequence Alignment Snakes Whole Genome Sequencing - methods sequence capture phylogenetics anchored hybrid enrichment marker selection reduced representation ultraconserved elements
ISSN:	0737-4038, 1537-1719, 1537-1719
Online-Zugang:	Volltext
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