Detection of blaCTX-M and blaDHA genes in stool samples of healthy people: comparison of culture- and shotgun metagenomic-based approaches

We implemented culture- and shotgun metagenomic sequencing (SMS)-based methods to assess the gut colonization with extended-spectrum cephalosporin-resistant Enterobacterales (ESC-R- Ent ) in 42 volunteers. Both methods were performed using native and pre-enriched (broth supplemented with cefuroxime)...

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Veröffentlicht in:	Frontiers in microbiology Jg. 14; S. 1236208
Hauptverfasser:	Campos-Madueno, Edgar I., Aldeia, Claudia, Perreten, Vincent, Sendi, Parham, Moser, Aline I., Endimiani, Andrea
Format:	Journal Article
Sprache:	Englisch
Veröffentlicht:	Frontiers Media S.A 31.08.2023
Schlagworte:	AmpC enrichment ESBL Illumina metagenomics Microbiology stool
ISSN:	1664-302X, 1664-302X
Online-Zugang:	Volltext
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