Phylodynamics of sunflower chlorotic mottle virus, an emerging pathosystem
Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provi...
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| Veröffentlicht in: | Virology (New York, N.Y.) Jg. 545; S. 33 - 39 |
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| Abstract | Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572–1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread. |
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| AbstractList | Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572-1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread. Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572–1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread. Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572-1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread.Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572-1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread. |
| Author | Cabrera Mederos, Dariel Leiva Mora, Michel Torres, Carolina Bejerman, Nicolás Lenardon, Sergio Giolitti, Fabián Trucco, Verónica |
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| Cites_doi | 10.1007/s00705-010-0703-3 10.1371/journal.pone.0108277 10.1371/journal.pone.0002523 10.1093/molbev/mss084 10.1016/j.virusres.2008.07.028 10.1038/s41598-017-01934-7 10.1111/j.1439-0434.2008.01501.x 10.1094/PDIS-04-19-0849-PDN 10.1093/ve/vex002 10.1093/molbev/msp259 10.1515/helia.2001.24.35.55 10.1093/sysbio/syy032 10.1038/nmeth.2109 10.1111/ppa.12942 10.1093/bioinformatics/btr481 10.1093/jhered/esx033 10.1146/annurev-phyto-073009-114404 10.1093/molbev/msn090 10.1111/j.1439-0434.2009.01656.x 10.1111/1755-0998.12603 10.1093/molbev/msq067 10.1080/01621459.1995.10476572 10.1093/ve/vev003 10.1093/sysbio/sys029 10.1094/PHYTO.2002.92.7.694 10.1007/s007050170144 10.1093/ve/vey016 10.1094/PDIS.1998.82.5.470 10.1007/s11262-012-0817-7 10.1007/s10658-009-9452-0 10.1099/vir.0.83543-0 10.1093/nar/gkh340 10.1371/journal.pcbi.1000520 10.1007/s00705-017-3275-7 |
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| Keywords | Emerging pathosystem Bayesian coalescent analysis Phylodynamics Sunflower chlorotic mottle virus Weeds |
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| Title | Phylodynamics of sunflower chlorotic mottle virus, an emerging pathosystem |
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