Phylodynamics of sunflower chlorotic mottle virus, an emerging pathosystem
Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provi...
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| Vydáno v: | Virology (New York, N.Y.) Ročník 545; s. 33 - 39 |
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| Médium: | Journal Article |
| Jazyk: | angličtina |
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United States
Elsevier Inc
01.06.2020
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| ISSN: | 0042-6822, 1096-0341, 1096-0341 |
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| Abstract | Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572–1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread. |
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| AbstractList | Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572-1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread. Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572–1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread. Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572-1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread.Distribution and epidemiological patterns of sunflower chlorotic mottle virus (SCMoV) in sunflower (Helianthus annuus L.) growing areas in Argentina were studied from 2006 to 2017. The virus was detected exclusively in the Pampas region (Entre Ríos, Santa Fe, Córdoba, La Pampa and Buenos Aires provinces). Phylodynamic analyses performed using the coat protein gene of SCMoV isolates from sunflower and weeds dated the most recent common ancestor (MRCA) back to 1887 (HPD95% = 1572-1971), which coincides with the dates of sunflower introduction in Argentina. The MRCA was located in the south of Buenos Aires province and was associated with sunflower host (posterior probability for the ancestral host, ppah = 0.98). The Bayesian phylodynamic analyses revealed the dispersal patterns of SCMoV, suggesting a link between natural host diversity, crop displacement by human activities and virus spread. |
| Author | Cabrera Mederos, Dariel Leiva Mora, Michel Torres, Carolina Bejerman, Nicolás Lenardon, Sergio Giolitti, Fabián Trucco, Verónica |
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| Cites_doi | 10.1007/s00705-010-0703-3 10.1371/journal.pone.0108277 10.1371/journal.pone.0002523 10.1093/molbev/mss084 10.1016/j.virusres.2008.07.028 10.1038/s41598-017-01934-7 10.1111/j.1439-0434.2008.01501.x 10.1094/PDIS-04-19-0849-PDN 10.1093/ve/vex002 10.1093/molbev/msp259 10.1515/helia.2001.24.35.55 10.1093/sysbio/syy032 10.1038/nmeth.2109 10.1111/ppa.12942 10.1093/bioinformatics/btr481 10.1093/jhered/esx033 10.1146/annurev-phyto-073009-114404 10.1093/molbev/msn090 10.1111/j.1439-0434.2009.01656.x 10.1111/1755-0998.12603 10.1093/molbev/msq067 10.1080/01621459.1995.10476572 10.1093/ve/vev003 10.1093/sysbio/sys029 10.1094/PHYTO.2002.92.7.694 10.1007/s007050170144 10.1093/ve/vey016 10.1094/PDIS.1998.82.5.470 10.1007/s11262-012-0817-7 10.1007/s10658-009-9452-0 10.1099/vir.0.83543-0 10.1093/nar/gkh340 10.1371/journal.pcbi.1000520 10.1007/s00705-017-3275-7 |
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| Keywords | Emerging pathosystem Bayesian coalescent analysis Phylodynamics Sunflower chlorotic mottle virus Weeds |
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| References | Patiño (bib37) 1963 Simmons, Holmes, Stephenson (bib41) 2008; 89 Gibbs, Ohshima (bib21) 2010; 48 Cabrera Mederos, Trucco, Bejerman, Lenardon, Giolitti (bib10) 2019 Rieux, Khatchikian (bib39) 2017; 17 Busso, Bentivegna, Fernández (bib4) 2013; 38 Minin, Bloomquist, Suchard (bib35) 2008; 25 Suchard, Lemey, Baele, Ayres, Drummond, Rambaut (bib43) 2018; 4 Lemey, Rambaut, Drummond, Suchard (bib30) 2009; 5 Xia (bib44) 2017; 108 FAO (bib17) 2019 Jones (bib26) 2009; 141 Kaliciak, Syller (bib27) 2009; 124 Rambaut, Drummond, Xie, Baele, Suchard (bib38) 2018; 67 Gibbs, Ohshima, Yasaka, Mohammadi, Gibbs, Jone (bib23) 2017; 3 Kiehr-Delhey, Delhey (bib29) 1981 Chen, Adams (bib12) 2001; 146 Giolitti, Bejerman, Trucco, de Breuil, Lenardon (bib18) 2012 Edgar (bib16) 2004; 32 Giolitti, Bejerman, de Breuil, Lenardon (bib46) 2010; 158 Gulya, Shiel, Freeman, Jordan, Isakeit, Berger (bib25) 2002; 92 Cabrera Mederos, Bejerman, Trucco, de Breuil, Lenardon, Giolitti (bib8) 2017; 162 Lenardon (bib32) 1994 Kass, Raftery (bib28) 1995; 90 Dujovny, Usugi, Shohara, Lenardon (bib15) 1998; 82 Cabrera Mederos, Giolitti, Torres, Portal (bib9) 2019; 68 Gibbs, Ohshima, Phillips, Gibbs (bib22) 2008; 3 Baele, Lemey, Bedford, Rambaut, Suchard, Alekseyenko (bib2) 2012; 29 Martin, Murell, Golden, Khoosal, Muhire (bib34) 2015; 1 Yasaka, Fukagawa, Ikematsu, Soda, Korkmaz, Golnaraghi, Katis, Ho, Gibbs, Ohshima (bib45) 2017; 7 Darriba, Taboada, Doallo, Posada (bib14) 2012; 9 Bejerman, Giolitti, de Breuil, Lenardon (bib5) 2010; 155 Muhire, Varsani, Martin (bib36) 2014; 9 Ronquist, Teslenko, van der Mark, Ayres, Darling, Höhna, Larget, Liu, Suchard, Huelsenbeck (bib40) 2012; 61 Castaño (bib11) 2018; 25 Lenardon, Giolitti, León, Bazzalo, Grondona (bib33) 2001; 24 Bielejec, Rambaut, Suchard, Lemey (bib7) 2011; 27 Daddario, Tucat, Bentivegna, Anderson (bib13) 2015 Giolitti, Bejerman, Lenardon (bib19) 2009; 157 Lemey, Rambaut, Welch, Suchard (bib31) 2010; 27 Burkart (bib3) 1957; 6 Bejerman, Giolitti, de Breuil, Lenardon (bib6) 2013; 46 ASAGIR (bib1) 2017 Giolitti, Bejerman, Nome, Visintin, de Breuil, Lenardon (bib20) 2014; 96 Gouy, Guindon, Gascuel (bib24) 2010; 27 Sharman, Thomas, Persley (bib42) 2008; 3 ASAGIR (10.1016/j.virol.2020.02.003_bib1) Chen (10.1016/j.virol.2020.02.003_bib12) 2001; 146 Muhire (10.1016/j.virol.2020.02.003_bib36) 2014; 9 Kiehr-Delhey (10.1016/j.virol.2020.02.003_bib29) 1981 Kass (10.1016/j.virol.2020.02.003_bib28) 1995; 90 Bielejec (10.1016/j.virol.2020.02.003_bib7) 2011; 27 Lemey (10.1016/j.virol.2020.02.003_bib31) 2010; 27 Rambaut (10.1016/j.virol.2020.02.003_bib38) 2018; 67 FAO (10.1016/j.virol.2020.02.003_bib17) Bejerman (10.1016/j.virol.2020.02.003_bib5) 2010; 155 Gulya (10.1016/j.virol.2020.02.003_bib25) 2002; 92 Burkart (10.1016/j.virol.2020.02.003_bib3) 1957; 6 Busso (10.1016/j.virol.2020.02.003_bib4) 2013; 38 Gibbs (10.1016/j.virol.2020.02.003_bib22) 2008; 3 Darriba (10.1016/j.virol.2020.02.003_bib14) 2012; 9 Daddario (10.1016/j.virol.2020.02.003_bib13) 2015 Minin (10.1016/j.virol.2020.02.003_bib35) 2008; 25 Jones (10.1016/j.virol.2020.02.003_bib26) 2009; 141 Giolitti (10.1016/j.virol.2020.02.003_bib18) 2012 Bejerman (10.1016/j.virol.2020.02.003_bib6) 2013; 46 Sharman (10.1016/j.virol.2020.02.003_bib42) 2008; 3 Xia (10.1016/j.virol.2020.02.003_bib44) 2017; 108 Patiño (10.1016/j.virol.2020.02.003_bib37) 1963 Dujovny (10.1016/j.virol.2020.02.003_bib15) 1998; 82 Yasaka (10.1016/j.virol.2020.02.003_bib45) 2017; 7 Simmons (10.1016/j.virol.2020.02.003_bib41) 2008; 89 Edgar (10.1016/j.virol.2020.02.003_bib16) 2004; 32 Lenardon (10.1016/j.virol.2020.02.003_bib33) 2001; 24 Cabrera Mederos (10.1016/j.virol.2020.02.003_bib10) 2019 Giolitti (10.1016/j.virol.2020.02.003_bib46) 2010; 158 Giolitti (10.1016/j.virol.2020.02.003_bib20) 2014; 96 Ronquist (10.1016/j.virol.2020.02.003_bib40) 2012; 61 Suchard (10.1016/j.virol.2020.02.003_bib43) 2018; 4 Gibbs (10.1016/j.virol.2020.02.003_bib23) 2017; 3 Baele (10.1016/j.virol.2020.02.003_bib2) 2012; 29 Cabrera Mederos (10.1016/j.virol.2020.02.003_bib9) 2019; 68 Lemey (10.1016/j.virol.2020.02.003_bib30) 2009; 5 Gouy (10.1016/j.virol.2020.02.003_bib24) 2010; 27 Lenardon (10.1016/j.virol.2020.02.003_bib32) 1994 Giolitti (10.1016/j.virol.2020.02.003_bib19) 2009; 157 Castaño (10.1016/j.virol.2020.02.003_bib11) 2018; 25 Martin (10.1016/j.virol.2020.02.003_bib34) 2015; 1 Gibbs (10.1016/j.virol.2020.02.003_bib21) 2010; 48 Kaliciak (10.1016/j.virol.2020.02.003_bib27) 2009; 124 Rieux (10.1016/j.virol.2020.02.003_bib39) 2017; 17 Cabrera Mederos (10.1016/j.virol.2020.02.003_bib8) 2017; 162 |
| References_xml | – volume: 146 start-page: 757 year: 2001 end-page: 766 ident: bib12 article-title: A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family publication-title: Arch. Virol. – volume: 3 start-page: 27 year: 2008 end-page: 29 ident: bib42 article-title: First report of Tobacco streak virus in sunflower ( publication-title: Australas. Plant Dis. Notes – volume: 5 year: 2009 ident: bib30 article-title: Bayesian phylogeography finds its roots publication-title: PLoS Comput. Biol. – volume: 157 start-page: 325 year: 2009 end-page: 328 ident: bib19 article-title: : an alternative host of sunflower chlorotic mottle virus in Argentina publication-title: J. Phytopathol. – start-page: 542 year: 1963 ident: bib37 article-title: Plantas introducidas publication-title: Plantas cultivadas y animales domésticos en América Equinoccial – volume: 3 year: 2008 ident: bib22 article-title: The prehistory of potyviruses: their initial radiation was during the dawn of agriculture publication-title: PloS One – volume: 9 year: 2014 ident: bib36 article-title: SDT : a virus classification tool based on pairwise sequence alignment and identity calculation publication-title: PloS One – start-page: 40 year: 2012 ident: bib18 article-title: Caraguatá” ( publication-title: XIV Jornadas Fitosanitarias Argentinas. 3-5/10 – volume: 27 start-page: 2910 year: 2011 end-page: 2912 ident: bib7 article-title: SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics publication-title: Bioinformatics – volume: 25 year: 2018 ident: bib11 article-title: The sunflower crop in Argentina: past, present and potential future publication-title: OCL-Oilseeds and fats, Crops and Lipids – volume: 24 start-page: 55 year: 2001 end-page: 66 ident: bib33 article-title: Effects of Sunflower chlorotic mottle virus infection on sunflower yield parameters publication-title: Helia – volume: 17 start-page: 608 year: 2017 end-page: 613 ident: bib39 article-title: TipDatingBeast: an R package to assist the implementation of phylogenetic tip-dating tests using BEAST publication-title: Mol. Ecol. Resour. – year: 2019 ident: bib17 article-title: FAO statistics – volume: 68 start-page: 239 year: 2019 end-page: 250 ident: bib9 article-title: Distribution and phylodynamics of papaya ringspot virus on Carica papaya in Cuba publication-title: Plant Pathol. – volume: 38 start-page: 95 year: 2013 end-page: 103 ident: bib4 article-title: A review on invasive plants in rangelands of Argentina publication-title: Interciencia – volume: 3 year: 2017 ident: bib23 article-title: The phylogenetics of the global population of potato virus Y and its necrogenic recombinants publication-title: Virus Evol – year: 2015 ident: bib13 article-title: La “carda silvestre” en Argentina: antecedentes, problemática causada por la invasión y estudios locales para resolverla – volume: 124 start-page: 707 year: 2009 end-page: 713 ident: bib27 article-title: New hosts of potato virus Y (PVY) among common wild plants in Europe publication-title: Eur. J. Plant Pathol. – volume: 155 start-page: 1331 year: 2010 end-page: 1335 ident: bib5 article-title: Molecular characterization of Sunflower chlorotic mottle virus: a member of a distinct species in the genus Potyvirus publication-title: Arch. Virol. – volume: 67 start-page: 901 year: 2018 end-page: 904 ident: bib38 article-title: Posterior summarization in bayesian phylogenetics using tracer 1.7 publication-title: Syst. Biol. – volume: 1 year: 2015 ident: bib34 article-title: Rdp4: detection and analysis of recombination patterns in virus genomes publication-title: Virus Evol. – volume: 25 start-page: 1459 year: 2008 end-page: 1471 ident: bib35 article-title: Smooth skyride through a rough skyline: bayesian coalescent-based inference of population dynamics publication-title: Mol. Biol. Evol. – volume: 27 start-page: 1877 year: 2010 end-page: 1885 ident: bib31 article-title: Phylogeography takes a relaxed random walk in continuous space and time publication-title: Mol. Biol. Evol. – volume: 7 start-page: 4240 year: 2017 ident: bib45 article-title: The timescale of emergence and spread of turnip mosaic potyvirus publication-title: Sci. Rep. – volume: 96 start-page: 189 year: 2014 end-page: 194 ident: bib20 article-title: Biological and molecular characterization of an isolate of pelargonium zonate spot virus in infecting sunflower in Argentina publication-title: J. Plant Pathol. – volume: 61 start-page: 539 year: 2012 end-page: 542 ident: bib40 article-title: Mrbayes 3.2: efficient bayesian phylogenetic inference and model choice across a large model space publication-title: Syst. Biol. – volume: 90 start-page: 773 year: 1995 end-page: 795 ident: bib28 article-title: Bayes factors publication-title: J. Am. Stat. Assoc. – volume: 29 start-page: 2157 year: 2012 end-page: 2167 ident: bib2 article-title: Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty publication-title: Mol. Biol. Evol. – start-page: 449 year: 1981 end-page: 454 ident: bib29 article-title: Necochense Mosaic of Sunflower in the Southeast of the Province of Buenos Aires, Argentina. IV Jornadas Fitosanitarias Argentinas, UNC – volume: 48 start-page: 205 year: 2010 end-page: 223 ident: bib21 article-title: Potyviruses and the digital revolution publication-title: Annu. Rev. Phytopathol. – volume: 89 start-page: 1081 year: 2008 end-page: 1085 ident: bib41 article-title: Rapid evolutionary dynamics of Zucchini yellow mosaic virus publication-title: J. Gen. Virol. – volume: 32 start-page: 1792 year: 2004 end-page: 1797 ident: bib16 article-title: MUSCLE: multiple sequence alignment with high accuracy and high throughput publication-title: Nucleic Acids Res. – start-page: 99 year: 1994 end-page: 103 ident: bib32 article-title: Síntomas de etiología viral en cultivos de girasol publication-title: Enfermedades del girasol en la Argentina – year: 2017 ident: bib1 article-title: Historia. El girasol en la Argentina – volume: 9 start-page: 772 year: 2012 ident: bib14 article-title: jModelTest 2: more models, new heuristics and parallel computing publication-title: Nat. Methods – volume: 46 start-page: 105 year: 2013 end-page: 110 ident: bib6 article-title: Sequencing of two sunflower chlorotic mottle virus isolates obtained from different natural hosts shed light on its evolutionary history publication-title: Virus Gene. – volume: 162 start-page: 1787 year: 2017 end-page: 1790 ident: bib8 article-title: Complete genome sequence of sunflower ring blotch virus, a new potyvirus infecting sunflower in Argentina publication-title: Arch. Virol. – volume: 141 start-page: 113 year: 2009 end-page: 130 ident: bib26 article-title: Plant virus emergence and evolution: origins, new encounter scenarios, factors driving emergence, effects of changing world conditions, and prospects for control publication-title: Virus Res. – volume: 4 start-page: vey016 year: 2018 ident: bib43 article-title: Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10 publication-title: Virus Evol – volume: 27 start-page: 221 year: 2010 end-page: 224 ident: bib24 article-title: SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building publication-title: Mol. Biol. Evol. – volume: 158 start-page: 536 year: 2010 end-page: 541 ident: bib46 article-title: Identification and characterization of a new strain of publication-title: J. Phytopathol. – volume: 92 start-page: 694 year: 2002 end-page: 702 ident: bib25 article-title: Host range and characterization of sunflower mosaic virus publication-title: Phytopathology – year: 2019 ident: bib10 article-title: First report of tobacco streak virus infecting sunflower in Argentina publication-title: Plant Disease – volume: 108 start-page: 431 year: 2017 end-page: 437 ident: bib44 article-title: DAMBE6: new tools for microbial genomics, phylogenetics and molecular evolution publication-title: J. Hered. – volume: 6 start-page: 243 year: 1957 end-page: 247 ident: bib3 article-title: Las Dipsacaceas asilvestradas en la Argentina publication-title: Bol. Soc. Arg. Bot. – volume: 82 start-page: 470 year: 1998 end-page: 474 ident: bib15 article-title: Characterization of a potyvirus infecting sunflower in Argentina publication-title: Plant Dis. – volume: 155 start-page: 1331 year: 2010 ident: 10.1016/j.virol.2020.02.003_bib5 article-title: Molecular characterization of Sunflower chlorotic mottle virus: a member of a distinct species in the genus Potyvirus publication-title: Arch. Virol. doi: 10.1007/s00705-010-0703-3 – volume: 96 start-page: 189 year: 2014 ident: 10.1016/j.virol.2020.02.003_bib20 article-title: Biological and molecular characterization of an isolate of pelargonium zonate spot virus in infecting sunflower in Argentina publication-title: J. Plant Pathol. – volume: 9 year: 2014 ident: 10.1016/j.virol.2020.02.003_bib36 article-title: SDT : a virus classification tool based on pairwise sequence alignment and identity calculation publication-title: PloS One doi: 10.1371/journal.pone.0108277 – volume: 3 year: 2008 ident: 10.1016/j.virol.2020.02.003_bib22 article-title: The prehistory of potyviruses: their initial radiation was during the dawn of agriculture publication-title: PloS One doi: 10.1371/journal.pone.0002523 – volume: 29 start-page: 2157 year: 2012 ident: 10.1016/j.virol.2020.02.003_bib2 article-title: Improving the accuracy of demographic and molecular clock model comparison while accommodating phylogenetic uncertainty publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/mss084 – volume: 141 start-page: 113 year: 2009 ident: 10.1016/j.virol.2020.02.003_bib26 article-title: Plant virus emergence and evolution: origins, new encounter scenarios, factors driving emergence, effects of changing world conditions, and prospects for control publication-title: Virus Res. doi: 10.1016/j.virusres.2008.07.028 – volume: 7 start-page: 4240 issue: 1 year: 2017 ident: 10.1016/j.virol.2020.02.003_bib45 article-title: The timescale of emergence and spread of turnip mosaic potyvirus publication-title: Sci. Rep. doi: 10.1038/s41598-017-01934-7 – volume: 157 start-page: 325 year: 2009 ident: 10.1016/j.virol.2020.02.003_bib19 article-title: Dipsacus fullonum: an alternative host of sunflower chlorotic mottle virus in Argentina publication-title: J. Phytopathol. doi: 10.1111/j.1439-0434.2008.01501.x – volume: 38 start-page: 95 year: 2013 ident: 10.1016/j.virol.2020.02.003_bib4 article-title: A review on invasive plants in rangelands of Argentina publication-title: Interciencia – year: 2019 ident: 10.1016/j.virol.2020.02.003_bib10 article-title: First report of tobacco streak virus infecting sunflower in Argentina publication-title: Plant Disease doi: 10.1094/PDIS-04-19-0849-PDN – volume: 3 issue: 1 year: 2017 ident: 10.1016/j.virol.2020.02.003_bib23 article-title: The phylogenetics of the global population of potato virus Y and its necrogenic recombinants publication-title: Virus Evol doi: 10.1093/ve/vex002 – volume: 27 start-page: 221 year: 2010 ident: 10.1016/j.virol.2020.02.003_bib24 article-title: SeaView version 4: a multiplatform graphical user interface for sequence alignment and phylogenetic tree building publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msp259 – volume: 24 start-page: 55 year: 2001 ident: 10.1016/j.virol.2020.02.003_bib33 article-title: Effects of Sunflower chlorotic mottle virus infection on sunflower yield parameters publication-title: Helia doi: 10.1515/helia.2001.24.35.55 – start-page: 542 year: 1963 ident: 10.1016/j.virol.2020.02.003_bib37 article-title: Plantas introducidas – volume: 67 start-page: 901 year: 2018 ident: 10.1016/j.virol.2020.02.003_bib38 article-title: Posterior summarization in bayesian phylogenetics using tracer 1.7 publication-title: Syst. Biol. doi: 10.1093/sysbio/syy032 – volume: 9 start-page: 772 year: 2012 ident: 10.1016/j.virol.2020.02.003_bib14 article-title: jModelTest 2: more models, new heuristics and parallel computing publication-title: Nat. Methods doi: 10.1038/nmeth.2109 – volume: 68 start-page: 239 year: 2019 ident: 10.1016/j.virol.2020.02.003_bib9 article-title: Distribution and phylodynamics of papaya ringspot virus on Carica papaya in Cuba publication-title: Plant Pathol. doi: 10.1111/ppa.12942 – volume: 25 year: 2018 ident: 10.1016/j.virol.2020.02.003_bib11 article-title: The sunflower crop in Argentina: past, present and potential future publication-title: OCL-Oilseeds and fats, Crops and Lipids – start-page: 449 year: 1981 ident: 10.1016/j.virol.2020.02.003_bib29 – volume: 27 start-page: 2910 year: 2011 ident: 10.1016/j.virol.2020.02.003_bib7 article-title: SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics publication-title: Bioinformatics doi: 10.1093/bioinformatics/btr481 – start-page: 99 year: 1994 ident: 10.1016/j.virol.2020.02.003_bib32 article-title: Síntomas de etiología viral en cultivos de girasol – volume: 108 start-page: 431 year: 2017 ident: 10.1016/j.virol.2020.02.003_bib44 article-title: DAMBE6: new tools for microbial genomics, phylogenetics and molecular evolution publication-title: J. Hered. doi: 10.1093/jhered/esx033 – ident: 10.1016/j.virol.2020.02.003_bib17 – start-page: 40 year: 2012 ident: 10.1016/j.virol.2020.02.003_bib18 article-title: Caraguatá” (Eryngium sp.): nuevo reservorio natural del sunflower chlorotic mottle virus (SCMoV) – volume: 48 start-page: 205 year: 2010 ident: 10.1016/j.virol.2020.02.003_bib21 article-title: Potyviruses and the digital revolution publication-title: Annu. Rev. Phytopathol. doi: 10.1146/annurev-phyto-073009-114404 – ident: 10.1016/j.virol.2020.02.003_bib1 – volume: 25 start-page: 1459 year: 2008 ident: 10.1016/j.virol.2020.02.003_bib35 article-title: Smooth skyride through a rough skyline: bayesian coalescent-based inference of population dynamics publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msn090 – volume: 158 start-page: 536 year: 2010 ident: 10.1016/j.virol.2020.02.003_bib46 article-title: Identification and characterization of a new strain of Sunflower chlorotic mottle virus, a Potyvirus infecting Asteraceae in Argentina. publication-title: J. Phytopathol. doi: 10.1111/j.1439-0434.2009.01656.x – volume: 17 start-page: 608 year: 2017 ident: 10.1016/j.virol.2020.02.003_bib39 article-title: TipDatingBeast: an R package to assist the implementation of phylogenetic tip-dating tests using BEAST publication-title: Mol. Ecol. Resour. doi: 10.1111/1755-0998.12603 – volume: 27 start-page: 1877 year: 2010 ident: 10.1016/j.virol.2020.02.003_bib31 article-title: Phylogeography takes a relaxed random walk in continuous space and time publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msq067 – volume: 90 start-page: 773 year: 1995 ident: 10.1016/j.virol.2020.02.003_bib28 article-title: Bayes factors publication-title: J. Am. Stat. Assoc. doi: 10.1080/01621459.1995.10476572 – volume: 1 year: 2015 ident: 10.1016/j.virol.2020.02.003_bib34 article-title: Rdp4: detection and analysis of recombination patterns in virus genomes publication-title: Virus Evol. doi: 10.1093/ve/vev003 – volume: 61 start-page: 539 year: 2012 ident: 10.1016/j.virol.2020.02.003_bib40 article-title: Mrbayes 3.2: efficient bayesian phylogenetic inference and model choice across a large model space publication-title: Syst. Biol. doi: 10.1093/sysbio/sys029 – volume: 92 start-page: 694 year: 2002 ident: 10.1016/j.virol.2020.02.003_bib25 article-title: Host range and characterization of sunflower mosaic virus publication-title: Phytopathology doi: 10.1094/PHYTO.2002.92.7.694 – volume: 3 start-page: 27 year: 2008 ident: 10.1016/j.virol.2020.02.003_bib42 article-title: First report of Tobacco streak virus in sunflower (Helianthus annuus), cotton (Gossypium hirsutum), chickpea (Cicer arietinum) and mung bean (Vigna radiata) in Australia publication-title: Australas. Plant Dis. Notes – volume: 146 start-page: 757 year: 2001 ident: 10.1016/j.virol.2020.02.003_bib12 article-title: A universal PCR primer to detect members of the Potyviridae and its use to examine the taxonomic status of several members of the family publication-title: Arch. Virol. doi: 10.1007/s007050170144 – volume: 4 start-page: vey016 year: 2018 ident: 10.1016/j.virol.2020.02.003_bib43 article-title: Bayesian phylogenetic and phylodynamic data integration using BEAST 1.10 publication-title: Virus Evol doi: 10.1093/ve/vey016 – volume: 82 start-page: 470 year: 1998 ident: 10.1016/j.virol.2020.02.003_bib15 article-title: Characterization of a potyvirus infecting sunflower in Argentina publication-title: Plant Dis. doi: 10.1094/PDIS.1998.82.5.470 – volume: 46 start-page: 105 year: 2013 ident: 10.1016/j.virol.2020.02.003_bib6 article-title: Sequencing of two sunflower chlorotic mottle virus isolates obtained from different natural hosts shed light on its evolutionary history publication-title: Virus Gene. doi: 10.1007/s11262-012-0817-7 – year: 2015 ident: 10.1016/j.virol.2020.02.003_bib13 – volume: 124 start-page: 707 year: 2009 ident: 10.1016/j.virol.2020.02.003_bib27 article-title: New hosts of potato virus Y (PVY) among common wild plants in Europe publication-title: Eur. J. Plant Pathol. doi: 10.1007/s10658-009-9452-0 – volume: 89 start-page: 1081 year: 2008 ident: 10.1016/j.virol.2020.02.003_bib41 article-title: Rapid evolutionary dynamics of Zucchini yellow mosaic virus publication-title: J. Gen. Virol. doi: 10.1099/vir.0.83543-0 – volume: 6 start-page: 243 year: 1957 ident: 10.1016/j.virol.2020.02.003_bib3 article-title: Las Dipsacaceas asilvestradas en la Argentina publication-title: Bol. Soc. Arg. Bot. – volume: 32 start-page: 1792 year: 2004 ident: 10.1016/j.virol.2020.02.003_bib16 article-title: MUSCLE: multiple sequence alignment with high accuracy and high throughput publication-title: Nucleic Acids Res. doi: 10.1093/nar/gkh340 – volume: 5 year: 2009 ident: 10.1016/j.virol.2020.02.003_bib30 article-title: Bayesian phylogeography finds its roots publication-title: PLoS Comput. Biol. doi: 10.1371/journal.pcbi.1000520 – volume: 162 start-page: 1787 year: 2017 ident: 10.1016/j.virol.2020.02.003_bib8 article-title: Complete genome sequence of sunflower ring blotch virus, a new potyvirus infecting sunflower in Argentina publication-title: Arch. Virol. doi: 10.1007/s00705-017-3275-7 |
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| Title | Phylodynamics of sunflower chlorotic mottle virus, an emerging pathosystem |
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