Whole genome sequencing of a rare rotavirus from archived stool sample demonstrates independent zoonotic origin of human G8P[14] strains in Hungary
•The genome sequence and phylogenetic analysis of a human G8P[14] rotavirus strain is described.•The strain originates very likely from an animal host species.•Different P[14] strains detected in Hungary likely represent independent zoonotic events. Genotype P[14] rotaviruses in humans are thought t...
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| Vydáno v: | Virus research Ročník 227; s. 96 - 103 |
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| Hlavní autoři: | , , , , , , , |
| Médium: | Journal Article |
| Jazyk: | angličtina |
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Netherlands
Elsevier B.V
02.01.2017
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| ISSN: | 0168-1702, 1872-7492 |
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| Abstract | •The genome sequence and phylogenetic analysis of a human G8P[14] rotavirus strain is described.•The strain originates very likely from an animal host species.•Different P[14] strains detected in Hungary likely represent independent zoonotic events.
Genotype P[14] rotaviruses in humans are thought to be zoonotic strains originating from bovine or ovine host species. Over the past 30 years only few genotype P[14] strains were identified in Hungary totaling<0.1% of all human rotaviruses whose genotype had been determined. In this study we report the genome sequence and phylogenetic analysis of a human genotype G8P[14] strain, RVA/Human-wt/HUN/182-02/2001/G8P[14]. The whole genome constellation (G8-P[14]-I2-R2-C2-M2-A11-N2-T6-E2-H3) of this strain was shared with another Hungarian zoonotic G8P[14] strain, RVA/Human-wt/HUN/BP1062/2004/G8P[14], although phylogenetic analyses revealed the two rotaviruses likely had different progenitors. Overall, our findings indicate that human G8P[14] rotavirus detected in Hungary in the past originated from independent zoonotic events. Further studies are needed to assess the public health risk associated with infections by various animal rotavirus strains. |
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| AbstractList | Genotype P[14] rotaviruses in humans are thought to be zoonotic strains originating from bovine or ovine host species. Over the past 30 years only few genotype P[14] strains were identified in Hungary totaling<0.1% of all human rotaviruses whose genotype had been determined. In this study we report the genome sequence and phylogenetic analysis of a human genotype G8P[14] strain, RVA/Human-wt/HUN/182-02/2001/G8P[14]. The whole genome constellation (G8-P[14]-I2-R2-C2-M2-A11-N2-T6-E2-H3) of this strain was shared with another Hungarian zoonotic G8P[14] strain, RVA/Human-wt/HUN/BP1062/2004/G8P[14], although phylogenetic analyses revealed the two rotaviruses likely had different progenitors. Overall, our findings indicate that human G8P[14] rotavirus detected in Hungary in the past originated from independent zoonotic events. Further studies are needed to assess the public health risk associated with infections by various animal rotavirus strains. •The genome sequence and phylogenetic analysis of a human G8P[14] rotavirus strain is described.•The strain originates very likely from an animal host species.•Different P[14] strains detected in Hungary likely represent independent zoonotic events. Genotype P[14] rotaviruses in humans are thought to be zoonotic strains originating from bovine or ovine host species. Over the past 30 years only few genotype P[14] strains were identified in Hungary totaling<0.1% of all human rotaviruses whose genotype had been determined. In this study we report the genome sequence and phylogenetic analysis of a human genotype G8P[14] strain, RVA/Human-wt/HUN/182-02/2001/G8P[14]. The whole genome constellation (G8-P[14]-I2-R2-C2-M2-A11-N2-T6-E2-H3) of this strain was shared with another Hungarian zoonotic G8P[14] strain, RVA/Human-wt/HUN/BP1062/2004/G8P[14], although phylogenetic analyses revealed the two rotaviruses likely had different progenitors. Overall, our findings indicate that human G8P[14] rotavirus detected in Hungary in the past originated from independent zoonotic events. Further studies are needed to assess the public health risk associated with infections by various animal rotavirus strains. |
| Author | Farkas, Szilvia L. Bányai, Krisztián Marton, Szilvia Dóró, Renáta Ihász, Katalin Varga-Kugler, Renáta Forró, Barbara Fehér, Enikő |
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| Keywords | Phylogenetic analysis Genetic diversity Rotavirus A Viral zoonosis Reassortment |
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| Snippet | •The genome sequence and phylogenetic analysis of a human G8P[14] rotavirus strain is described.•The strain originates very likely from an animal host... Genotype P[14] rotaviruses in humans are thought to be zoonotic strains originating from bovine or ovine host species. Over the past 30 years only few genotype... |
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| SubjectTerms | cattle feces Genetic diversity genome genotype hosts humans Hungary nucleotide sequences Phylogenetic analysis phylogeny Reassortment Reoviridae risk Rotavirus Rotavirus A sequence analysis sheep Viral zoonosis |
| Title | Whole genome sequencing of a rare rotavirus from archived stool sample demonstrates independent zoonotic origin of human G8P[14] strains in Hungary |
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