Complete genome sequence analysis of two human enterovirus C99 strains isolated in Xinjiang Uighur Autonomous Region, China, in 2011

Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C, and although only a few EV-C99 sequences have been obtained thus far, the strain has been identified on four continents. In 2011, two EV-C99 strains were isolated from two healthy children in Xinjiang, China, and to our kno...

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Published in:	Archives of virology Vol. 159; no. 2; pp. 359 - 364
Main Authors:	Sun, Qiang, Zhang, Yong, Cui, Hui, Zhu, Shuangli, Li, Xiaolei, Huang, Guohong, Tang, Haishu, Yan, Dongmei, Wang, Dongyan, Xu, Wenbo
Format:	Journal Article
Language:	English
Published:	Vienna Springer-Verlag 01.02.2014 Springer Vienna Springer Nature B.V
Subjects:	Amino acids Asymptomatic Diseases Biomedical and Life Sciences Biomedicine Brief Report Child China Cluster Analysis Disease control Disease prevention Enterovirus Enterovirus - genetics Enterovirus - isolation & purification Enterovirus Infections Enterovirus Infections - virology genetic recombination genetics Genome, Viral Genomes Human enterovirus Humans Infectious Diseases isolation & purification Medical Microbiology Molecular Sequence Data nucleotide sequences Phylogenetics Phylogeny Proteins Recombination, Genetic RNA, Viral RNA, Viral - genetics sequence analysis Sequence Analysis, DNA Sequence Homology Virology China Bangladesh United States > US Xinjiang Uighur Autonomous Region China Species Enterovirus Molecular Typing Method Acute Flaccid Paralysis Surveillance Acute Flaccid Paralysis Human Enterovirus
ISSN:	0304-8608, 1432-8798, 1432-8798
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Abstract	Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C, and although only a few EV-C99 sequences have been obtained thus far, the strain has been identified on four continents. In 2011, two EV-C99 strains were isolated from two healthy children in Xinjiang, China, and to our knowledge, this is the first finding of EV-C99 in China. The two strains, designated HT-XEBGH09F and KSSC-ALXHH01F, showed 78.8–86.6 % similarity to other EV-C99 strains and exhibited intra-serotypic genetic recombination within the P2 coding regions. These findings reflect high genetic divergence among the EV-C99 strains.
AbstractList	Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C, and although only a few EV-C99 sequences have been obtained thus far, the strain has been identified on four continents. In 2011, two EV-C99 strains were isolated from two healthy children in Xinjiang, China, and to our knowledge, this is the first finding of EV-C99 in China. The two strains, designated HT-XEBGH09F and KSSC-ALXHH01F, showed 78.8–86.6 % similarity to other EV-C99 strains and exhibited intra-serotypic genetic recombination within the P2 coding regions. These findings reflect high genetic divergence among the EV-C99 strains. Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C, and although only a few EV-C99 sequences have been obtained thus far, the strain has been identified on four continents. In 2011, two EV-C99 strains were isolated from two healthy children in Xinjiang, China, and to our knowledge, this is the first finding of EV-C99 in China. The two strains, designated HT-XEBGH09F and KSSC-ALXHH01F, showed 78.8-86.6 % similarity to other EV-C99 strains and exhibited intra-serotypic genetic recombination within the P2 coding regions. These findings reflect high genetic divergence among the EV-C99 strains.[PUBLICATION ABSTRACT] Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C, and although only a few EV-C99 sequences have been obtained thus far, the strain has been identified on four continents. In 2011, two EV-C99 strains were isolated from two healthy children in Xinjiang, China, and to our knowledge, this is the first finding of EV-C99 in China. The two strains, designated HT-XEBGH09F and KSSC-ALXHH01F, showed 78.8-86.6 % similarity to other EV-C99 strains and exhibited intra-serotypic genetic recombination within the P2 coding regions. These findings reflect high genetic divergence among the EV-C99 strains.Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C, and although only a few EV-C99 sequences have been obtained thus far, the strain has been identified on four continents. In 2011, two EV-C99 strains were isolated from two healthy children in Xinjiang, China, and to our knowledge, this is the first finding of EV-C99 in China. The two strains, designated HT-XEBGH09F and KSSC-ALXHH01F, showed 78.8-86.6 % similarity to other EV-C99 strains and exhibited intra-serotypic genetic recombination within the P2 coding regions. These findings reflect high genetic divergence among the EV-C99 strains. Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C , and although only a few EV-C99 sequences have been obtained thus far, the strain has been identified on four continents. In 2011, two EV-C99 strains were isolated from two healthy children in Xinjiang, China, and to our knowledge, this is the first finding of EV-C99 in China. The two strains, designated HT-XEBGH09F and KSSC-ALXHH01F, showed 78.8–86.6 % similarity to other EV-C99 strains and exhibited intra-serotypic genetic recombination within the P2 coding regions. These findings reflect high genetic divergence among the EV-C99 strains.
Author	Cui, Hui Yan, Dongmei Tang, Haishu Sun, Qiang Li, Xiaolei Huang, Guohong Wang, Dongyan Xu, Wenbo Zhu, Shuangli Zhang, Yong
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Cites_doi	10.1007/s00705-011-1207-5 10.1371/journal.pone.0024823 10.1089/aid.1995.11.1423 10.1007/s00705-009-0564-9 10.1099/vir.0.008540-0 10.1017/S1355838201001911 10.1371/journal.pone.0015300 10.1007/s11262-012-0776-z 10.1007/s11262-011-0584-x 10.1016/j.meegid.2013.04.011 10.1371/journal.pone.0060641 10.1128/JVI.00837-12 10.1186/1471-2334-9-136 10.1016/j.jcv.2009.02.002 10.1016/j.jcv.2012.10.013 10.1128/JCM.06657-11 10.1093/molbev/msr121 10.1128/JVI.00698-10 10.1128/JVI.73.3.1941-1948.1999
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Snippet	Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C, and although only a few EV-C99 sequences have been obtained thus far, the strain... Human enterovirus C99 (EV-C99) is a new member of the species Enterovirus C , and although only a few EV-C99 sequences have been obtained thus far, the strain...
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SubjectTerms	Amino acids Asymptomatic Diseases Biomedical and Life Sciences Biomedicine Brief Report Child China Cluster Analysis Disease control Disease prevention Enterovirus Enterovirus - genetics Enterovirus - isolation & purification Enterovirus Infections Enterovirus Infections - virology genetic recombination genetics Genome, Viral Genomes Human enterovirus Humans Infectious Diseases isolation & purification Medical Microbiology Molecular Sequence Data nucleotide sequences Phylogenetics Phylogeny Proteins Recombination, Genetic RNA, Viral RNA, Viral - genetics sequence analysis Sequence Analysis, DNA Sequence Homology Virology
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Title	Complete genome sequence analysis of two human enterovirus C99 strains isolated in Xinjiang Uighur Autonomous Region, China, in 2011
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