Ancient DNA indicates human population shifts and admixture in northern and southern China

Human genetic history in East Asia is poorly understood. To clarify population relationships, we obtained genome wide data from 26 ancient individuals from northern and southern East Asia spanning 9,500-300 years ago. Genetic differentiation was higher in the past than the present, reflecting a majo...

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Published in:Science (American Association for the Advancement of Science) Vol. 369; no. 6501; p. 282
Main Authors: Yang, Melinda A, Fan, Xuechun, Sun, Bo, Chen, Chungyu, Lang, Jianfeng, Ko, Ying-Chin, Tsang, Cheng-Hwa, Chiu, Hunglin, Wang, Tianyi, Bao, Qingchuan, Wu, Xiaohong, Hajdinjak, Mateja, Ko, Albert Min-Shan, Ding, Manyu, Cao, Peng, Yang, Ruowei, Liu, Feng, Nickel, Birgit, Dai, Qingyan, Feng, Xiaotian, Zhang, Lizhao, Sun, Chengkai, Ning, Chao, Zeng, Wen, Zhao, Yongsheng, Zhang, Ming, Gao, Xing, Cui, Yinqiu, Reich, David, Stoneking, Mark, Fu, Qiaomei
Format: Journal Article
Language:English
Published: United States 17.07.2020
ISSN:1095-9203, 1095-9203
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Abstract Human genetic history in East Asia is poorly understood. To clarify population relationships, we obtained genome wide data from 26 ancient individuals from northern and southern East Asia spanning 9,500-300 years ago. Genetic differentiation was higher in the past than the present, reflecting a major episode of admixture involving northern East Asian ancestry spreading across southern East Asia after the Neolithic, transforming the genetic ancestry of southern China. Mainland southern East Asian and Taiwan Strait island samples from the Neolithic show clear connections with modern and ancient samples with Austronesian-related ancestry, supporting a southern China origin for proto-Austronesians. Connections among Neolithic coastal groups from Siberia and Japan to Vietnam indicate that migration and gene flow played an important role in the prehistory of coastal Asia.
AbstractList Human genetic history in East Asia is poorly understood. To clarify population relationships, we obtained genome-wide data from 26 ancient individuals from northern and southern East Asia spanning 9500 to 300 years ago. Genetic differentiation in this region was higher in the past than the present, which reflects a major episode of admixture involving northern East Asian ancestry spreading across southern East Asia after the Neolithic, thereby transforming the genetic ancestry of southern China. Mainland southern East Asian and Taiwan Strait island samples from the Neolithic show clear connections with modern and ancient individuals with Austronesian-related ancestry, which supports an origin in southern China for proto-Austronesians. Connections among Neolithic coastal groups from Siberia and Japan to Vietnam indicate that migration and gene flow played an important role in the prehistory of coastal Asia.Human genetic history in East Asia is poorly understood. To clarify population relationships, we obtained genome-wide data from 26 ancient individuals from northern and southern East Asia spanning 9500 to 300 years ago. Genetic differentiation in this region was higher in the past than the present, which reflects a major episode of admixture involving northern East Asian ancestry spreading across southern East Asia after the Neolithic, thereby transforming the genetic ancestry of southern China. Mainland southern East Asian and Taiwan Strait island samples from the Neolithic show clear connections with modern and ancient individuals with Austronesian-related ancestry, which supports an origin in southern China for proto-Austronesians. Connections among Neolithic coastal groups from Siberia and Japan to Vietnam indicate that migration and gene flow played an important role in the prehistory of coastal Asia.
Human genetic history in East Asia is poorly understood. To clarify population relationships, we obtained genome wide data from 26 ancient individuals from northern and southern East Asia spanning 9,500-300 years ago. Genetic differentiation was higher in the past than the present, reflecting a major episode of admixture involving northern East Asian ancestry spreading across southern East Asia after the Neolithic, transforming the genetic ancestry of southern China. Mainland southern East Asian and Taiwan Strait island samples from the Neolithic show clear connections with modern and ancient samples with Austronesian-related ancestry, supporting a southern China origin for proto-Austronesians. Connections among Neolithic coastal groups from Siberia and Japan to Vietnam indicate that migration and gene flow played an important role in the prehistory of coastal Asia.
Author Ko, Ying-Chin
Chiu, Hunglin
Hajdinjak, Mateja
Chen, Chungyu
Bao, Qingchuan
Yang, Melinda A
Lang, Jianfeng
Wu, Xiaohong
Yang, Ruowei
Wang, Tianyi
Dai, Qingyan
Gao, Xing
Stoneking, Mark
Liu, Feng
Zeng, Wen
Zhang, Lizhao
Sun, Bo
Zhao, Yongsheng
Fan, Xuechun
Feng, Xiaotian
Tsang, Cheng-Hwa
Nickel, Birgit
Reich, David
Ding, Manyu
Sun, Chengkai
Ning, Chao
Cui, Yinqiu
Fu, Qiaomei
Ko, Albert Min-Shan
Cao, Peng
Zhang, Ming
Author_xml – sequence: 1
  givenname: Melinda A
  orcidid: 0000-0001-9004-7563
  surname: Yang
  fullname: Yang, Melinda A
  organization: Department of Biology, University of Richmond, Richmond, VA 23173, USA
– sequence: 2
  givenname: Xuechun
  surname: Fan
  fullname: Fan, Xuechun
  organization: Fujian Museum, Fuzhou 350001, China
– sequence: 3
  givenname: Bo
  surname: Sun
  fullname: Sun, Bo
  organization: Shandong Provincial Institute of Cultural Relics and Archaeology, Jinan 250012, China
– sequence: 4
  givenname: Chungyu
  surname: Chen
  fullname: Chen, Chungyu
  organization: Institute of History and Philology, Academia Sinica, Taipei 11529, Taiwan
– sequence: 5
  givenname: Jianfeng
  surname: Lang
  fullname: Lang, Jianfeng
  organization: School of History and Culture, Shandong University, Jinan 250100, China
– sequence: 6
  givenname: Ying-Chin
  surname: Ko
  fullname: Ko, Ying-Chin
  organization: Environment-Omics-Disease Research Center, China Medical University and Hospital, Taichung 40402, Taiwan
– sequence: 7
  givenname: Cheng-Hwa
  orcidid: 0000-0002-1549-2234
  surname: Tsang
  fullname: Tsang, Cheng-Hwa
  organization: Institute of Anthropology, National Tsinghua University, Hsinchu 30013, Taiwan
– sequence: 8
  givenname: Hunglin
  orcidid: 0000-0002-7027-8601
  surname: Chiu
  fullname: Chiu, Hunglin
  organization: Institute of Anthropology, National Tsinghua University, Hsinchu 30013, Taiwan
– sequence: 9
  givenname: Tianyi
  orcidid: 0000-0002-4790-7668
  surname: Wang
  fullname: Wang, Tianyi
  organization: School of Cultural Heritage, Northwest University, Xi'an 710069, China
– sequence: 10
  givenname: Qingchuan
  surname: Bao
  fullname: Bao, Qingchuan
  organization: The Institute of Cultural Relics and Archaeology, Inner Mongolia Autonomous Region 010011, China
– sequence: 11
  givenname: Xiaohong
  orcidid: 0000-0002-3819-0829
  surname: Wu
  fullname: Wu, Xiaohong
  organization: School of Archaeology and Museology, Peking University, Beijing 100871, China
– sequence: 12
  givenname: Mateja
  surname: Hajdinjak
  fullname: Hajdinjak, Mateja
  organization: Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
– sequence: 13
  givenname: Albert Min-Shan
  surname: Ko
  fullname: Ko, Albert Min-Shan
  organization: Key Laboratory of Vertebrate Evolution and Human Origins of Chinese Academy of Sciences, Institute of Vertebrate Paleontology and Paleoanthropology, CAS, Beijing 100044, China
– sequence: 14
  givenname: Manyu
  surname: Ding
  fullname: Ding, Manyu
  organization: University of Chinese Academy of Sciences, Beijing 100049, China
– sequence: 15
  givenname: Peng
  surname: Cao
  fullname: Cao, Peng
  organization: Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Beijing 100044, China
– sequence: 16
  givenname: Ruowei
  surname: Yang
  fullname: Yang, Ruowei
  organization: Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Beijing 100044, China
– sequence: 17
  givenname: Feng
  surname: Liu
  fullname: Liu, Feng
  organization: Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Beijing 100044, China
– sequence: 18
  givenname: Birgit
  surname: Nickel
  fullname: Nickel, Birgit
  organization: School of Archaeology and Museology, Peking University, Beijing 100871, China
– sequence: 19
  givenname: Qingyan
  surname: Dai
  fullname: Dai, Qingyan
  organization: Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Beijing 100044, China
– sequence: 20
  givenname: Xiaotian
  surname: Feng
  fullname: Feng, Xiaotian
  organization: Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Beijing 100044, China
– sequence: 21
  givenname: Lizhao
  orcidid: 0000-0001-6983-8053
  surname: Zhang
  fullname: Zhang, Lizhao
  organization: Center for Excellence in Life and Paleoenvironment, Chinese Academy of Sciences, Beijing 100044, China
– sequence: 22
  givenname: Chengkai
  surname: Sun
  fullname: Sun, Chengkai
  organization: Shandong Museum, Jinan 250014, China
– sequence: 23
  givenname: Chao
  orcidid: 0000-0002-8848-3961
  surname: Ning
  fullname: Ning, Chao
  organization: School of Life Sciences, Jilin University, Changchun 130023, China
– sequence: 24
  givenname: Wen
  surname: Zeng
  fullname: Zeng, Wen
  organization: Institute of Cultural Heritage, Shandong University, Qingdao 266237, China
– sequence: 25
  givenname: Yongsheng
  surname: Zhao
  fullname: Zhao, Yongsheng
  organization: Institute of Cultural Heritage, Shandong University, Qingdao 266237, China
– sequence: 26
  givenname: Ming
  surname: Zhang
  fullname: Zhang, Ming
  organization: University of Chinese Academy of Sciences, Beijing 100049, China
– sequence: 27
  givenname: Xing
  orcidid: 0000-0001-5295-3629
  surname: Gao
  fullname: Gao, Xing
  organization: University of Chinese Academy of Sciences, Beijing 100049, China
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  givenname: Yinqiu
  orcidid: 0000-0003-3702-5773
  surname: Cui
  fullname: Cui, Yinqiu
  organization: School of Life Sciences, Jilin University, Changchun 130023, China
– sequence: 29
  givenname: David
  orcidid: 0000-0002-7037-5292
  surname: Reich
  fullname: Reich, David
  organization: Howard Hughes Medical Institute, Harvard Medical School, Boston, MA 02115, USA
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  givenname: Mark
  surname: Stoneking
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  organization: Department of Evolutionary Genetics, Max Planck Institute for Evolutionary Anthropology, 04103 Leipzig, Germany
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  givenname: Qiaomei
  orcidid: 0000-0002-7141-0002
  surname: Fu
  fullname: Fu, Qiaomei
  email: fuqiaomei@ivpp.ac.cn
  organization: University of Chinese Academy of Sciences, Beijing 100049, China
BackLink https://www.ncbi.nlm.nih.gov/pubmed/32409524$$D View this record in MEDLINE/PubMed
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ContentType Journal Article
Copyright Copyright © 2020, American Association for the Advancement of Science.
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Copyright_xml – notice: Copyright © 2020, American Association for the Advancement of Science.
– notice: Copyright © 2020 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.
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DOI 10.1126/science.aba0909
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Snippet Human genetic history in East Asia is poorly understood. To clarify population relationships, we obtained genome wide data from 26 ancient individuals from...
Human genetic history in East Asia is poorly understood. To clarify population relationships, we obtained genome-wide data from 26 ancient individuals from...
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Title Ancient DNA indicates human population shifts and admixture in northern and southern China
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