Fast and accurate protein structure search with Foldseek

As structure prediction methods are generating millions of publicly available protein structures, searching these databases is becoming a bottleneck. Foldseek aligns the structure of a query protein against a database by describing tertiary amino acid interactions within proteins as sequences over a...

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Bibliographic Details

Published in:	Nature biotechnology Vol. 42; no. 2; pp. 243 - 246
Main Authors:	van Kempen, Michel, Kim, Stephanie S., Tumescheit, Charlotte, Mirdita, Milot, Lee, Jeongjae, Gilchrist, Cameron L. M., Söding, Johannes, Steinegger, Martin
Format:	Journal Article
Language:	English
Published:	New York Nature Publishing Group US 01.02.2024 Nature Publishing Group
Subjects:	631/114 631/114/794 631/535 Agriculture Amino acids Bioinformatics Biology Biomedical and Life Sciences Biomedical Engineering/Biotechnology Biomedicine Biotechnology Brief Communication Life Sciences Protein structure Proteins
ISSN:	1087-0156, 1546-1696, 1546-1696
Online Access:	Get full text
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