Ubiquitin-like modification dependent proteasomal degradation and disease therapy

Many proteins have been identified subject to ubiquitin (Ub)-independent proteasome degradation (UbIPD), a process mediated by Ub-like (UBL) proteins.UBL-conjugates can be processed by 19S proteasomes by mechanisms different from Ub-conjugates and by proteasome activator 28γ, which was previously th...

Ausführliche Beschreibung

Gespeichert in:
Bibliographische Detailangaben
Veröffentlicht in:Trends in molecular medicine Jg. 30; H. 11; S. 1061 - 1075
Hauptverfasser: Wang, Tiantian, Jiang, Jie, Zhang, Xue, Ke, Xisong, Qu, Yi
Format: Journal Article
Sprache:Englisch
Veröffentlicht: England Elsevier Ltd 01.11.2024
Schlagworte:
ISSN:1471-4914, 1471-499X, 1471-499X
Online-Zugang:Volltext
Tags: Tag hinzufügen
Keine Tags, Fügen Sie den ersten Tag hinzu!
Abstract Many proteins have been identified subject to ubiquitin (Ub)-independent proteasome degradation (UbIPD), a process mediated by Ub-like (UBL) proteins.UBL-conjugates can be processed by 19S proteasomes by mechanisms different from Ub-conjugates and by proteasome activator 28γ, which was previously thought to work as an activator of UbIPD.Ub and UBLs coordinate proteasome degradation to maintain protein homeostasis.UBL proteins, enzymes and modification substrates are tightly associated with proteostasis in muscle and neurodegenerative diseases. Although it is believed that ubiquitin (Ub) modification is required for protein degradation in the proteasome system (UPS), several proteins are subject to Ub-independent proteasome degradation, and in many cases ubiquitin-like (UBL) modifications, including neddylation, FAT10ylation, SUMOylation, ISGylation, and urmylation, are essential instead. In this Review, we focus on UBL-dependent proteasome degradation (UBLPD), on proteasome regulators especially shuttle factors and receptors, as well as potential competition and coordination with UPS. We propose that there is a distinct UBL–proteasome system (UBLPS) that might be underestimated in protein degradation. Finally, we investigate the association of UBLPD with muscle wasting and neurodegenerative diseases in which the proteasome is abnormally activated and impaired, respectively, and suggest strategies to modulate UBLPD for disease therapy. Although it is believed that ubiquitin (Ub) modification is required for protein degradation in the proteasome system (UPS), several proteins are subject to Ub-independent proteasome degradation, and in many cases ubiquitin-like (UBL) modifications, including neddylation, FAT10ylation, SUMOylation, ISGylation, and urmylation, are essential instead. In this Review, we focus on UBL-dependent proteasome degradation (UBLPD), on proteasome regulators especially shuttle factors and receptors, as well as potential competition and coordination with UPS. We propose that there is a distinct UBL–proteasome system (UBLPS) that might be underestimated in protein degradation. Finally, we investigate the association of UBLPD with muscle wasting and neurodegenerative diseases in which the proteasome is abnormally activated and impaired, respectively, and suggest strategies to modulate UBLPD for disease therapy.
AbstractList Many proteins have been identified subject to ubiquitin (Ub)-independent proteasome degradation (UbIPD), a process mediated by Ub-like (UBL) proteins.UBL-conjugates can be processed by 19S proteasomes by mechanisms different from Ub-conjugates and by proteasome activator 28γ, which was previously thought to work as an activator of UbIPD.Ub and UBLs coordinate proteasome degradation to maintain protein homeostasis.UBL proteins, enzymes and modification substrates are tightly associated with proteostasis in muscle and neurodegenerative diseases. Although it is believed that ubiquitin (Ub) modification is required for protein degradation in the proteasome system (UPS), several proteins are subject to Ub-independent proteasome degradation, and in many cases ubiquitin-like (UBL) modifications, including neddylation, FAT10ylation, SUMOylation, ISGylation, and urmylation, are essential instead. In this Review, we focus on UBL-dependent proteasome degradation (UBLPD), on proteasome regulators especially shuttle factors and receptors, as well as potential competition and coordination with UPS. We propose that there is a distinct UBL–proteasome system (UBLPS) that might be underestimated in protein degradation. Finally, we investigate the association of UBLPD with muscle wasting and neurodegenerative diseases in which the proteasome is abnormally activated and impaired, respectively, and suggest strategies to modulate UBLPD for disease therapy. Although it is believed that ubiquitin (Ub) modification is required for protein degradation in the proteasome system (UPS), several proteins are subject to Ub-independent proteasome degradation, and in many cases ubiquitin-like (UBL) modifications, including neddylation, FAT10ylation, SUMOylation, ISGylation, and urmylation, are essential instead. In this Review, we focus on UBL-dependent proteasome degradation (UBLPD), on proteasome regulators especially shuttle factors and receptors, as well as potential competition and coordination with UPS. We propose that there is a distinct UBL–proteasome system (UBLPS) that might be underestimated in protein degradation. Finally, we investigate the association of UBLPD with muscle wasting and neurodegenerative diseases in which the proteasome is abnormally activated and impaired, respectively, and suggest strategies to modulate UBLPD for disease therapy.
Although it is believed that ubiquitin (Ub) modification is required for protein degradation in the proteasome system (UPS), several proteins are subject to Ub-independent proteasome degradation, and in many cases ubiquitin-like (UBL) modifications, including neddylation, FAT10ylation, SUMOylation, ISGylation, and urmylation, are essential instead. In this Review, we focus on UBL-dependent proteasome degradation (UBLPD), on proteasome regulators especially shuttle factors and receptors, as well as potential competition and coordination with UPS. We propose that there is a distinct UBL-proteasome system (UBLPS) that might be underestimated in protein degradation. Finally, we investigate the association of UBLPD with muscle wasting and neurodegenerative diseases in which the proteasome is abnormally activated and impaired, respectively, and suggest strategies to modulate UBLPD for disease therapy.
Although it is believed that ubiquitin (Ub) modification is required for protein degradation in the proteasome system (UPS), several proteins are subject to Ub-independent proteasome degradation, and in many cases ubiquitin-like (UBL) modifications, including neddylation, FAT10ylation, SUMOylation, ISGylation, and urmylation, are essential instead. In this Review, we focus on UBL-dependent proteasome degradation (UBLPD), on proteasome regulators especially shuttle factors and receptors, as well as potential competition and coordination with UPS. We propose that there is a distinct UBL-proteasome system (UBLPS) that might be underestimated in protein degradation. Finally, we investigate the association of UBLPD with muscle wasting and neurodegenerative diseases in which the proteasome is abnormally activated and impaired, respectively, and suggest strategies to modulate UBLPD for disease therapy.Although it is believed that ubiquitin (Ub) modification is required for protein degradation in the proteasome system (UPS), several proteins are subject to Ub-independent proteasome degradation, and in many cases ubiquitin-like (UBL) modifications, including neddylation, FAT10ylation, SUMOylation, ISGylation, and urmylation, are essential instead. In this Review, we focus on UBL-dependent proteasome degradation (UBLPD), on proteasome regulators especially shuttle factors and receptors, as well as potential competition and coordination with UPS. We propose that there is a distinct UBL-proteasome system (UBLPS) that might be underestimated in protein degradation. Finally, we investigate the association of UBLPD with muscle wasting and neurodegenerative diseases in which the proteasome is abnormally activated and impaired, respectively, and suggest strategies to modulate UBLPD for disease therapy.
Author Ke, Xisong
Zhang, Xue
Qu, Yi
Wang, Tiantian
Jiang, Jie
Author_xml – sequence: 1
  givenname: Tiantian
  surname: Wang
  fullname: Wang, Tiantian
  organization: Center for Chemical Biology, Institute of Interdisciplinary Integrative Medicine Research, Shanghai University of Traditional Chinese Medicine, Shanghai, China
– sequence: 2
  givenname: Jie
  surname: Jiang
  fullname: Jiang, Jie
  organization: Center for Chemical Biology, Institute of Interdisciplinary Integrative Medicine Research, Shanghai University of Traditional Chinese Medicine, Shanghai, China
– sequence: 3
  givenname: Xue
  surname: Zhang
  fullname: Zhang, Xue
  organization: Center for Chemical Biology, Institute of Interdisciplinary Integrative Medicine Research, Shanghai University of Traditional Chinese Medicine, Shanghai, China
– sequence: 4
  givenname: Xisong
  surname: Ke
  fullname: Ke, Xisong
  email: xisongke@shutcm.edu.cn
  organization: Center for Chemical Biology, Institute of Interdisciplinary Integrative Medicine Research, Shanghai University of Traditional Chinese Medicine, Shanghai, China
– sequence: 5
  givenname: Yi
  surname: Qu
  fullname: Qu, Yi
  email: yiqu@shutcm.edu.cn
  organization: Center for Chemical Biology, Institute of Interdisciplinary Integrative Medicine Research, Shanghai University of Traditional Chinese Medicine, Shanghai, China
BackLink https://www.ncbi.nlm.nih.gov/pubmed/38851992$$D View this record in MEDLINE/PubMed
BookMark eNqFkU1rHSEUhqWkNB_tPyhllt3MVGd0HEsplJB-QKAEEuhOHD223jh6o97C_fcxnaSLbO5K0ed9OT6eoqMQAyD0luCOYDJ-2HRL9AuYrsc97TDrMGYv0AmhnLRUiF9H__eEHqPTnDcYE8b59AodD9PEiBD9Cbq6md3dzhUXWu9uoVmicdZpVVwMjYEtBAOhNNsUC6gcF-Xr6e-kzEqoYBrjcr2CpvyBpLb71-ilVT7Dm8f1DN18vbg-_95e_vz24_zLZaspYaWlVFjDp5HzwWoliOmBzkaJmVk82Bk448TaiVuKrWaV0KAGK-yoLCZ6HIYz9H7trbPd7SAXubiswXsVIO6yHPDIxNQPdKzou0d0N1djcpvcotJePmmowMcV0CnmnMBK7cq_F5aknJcEywfnciNX5_LBucRMVuc1TJ-Fn_oPxD6vMaiS_jpIMmsHQYNxCXSRJrpDBZ-eFWjvQv07fwv7w_F7ZGuz3Q
CitedBy_id crossref_primary_10_3390_biomedicines12122795
crossref_primary_10_1016_j_isci_2025_113029
crossref_primary_10_1002_cac2_70044
crossref_primary_10_3389_fimmu_2025_1554680
crossref_primary_10_62347_CLIG5523
crossref_primary_10_1016_j_cclet_2025_111760
crossref_primary_10_62347_BZPE6333
crossref_primary_10_1038_s41388_025_03310_6
Cites_doi 10.1016/j.cmet.2023.05.011
10.1126/scisignal.abm1756
10.1089/hum.2010.057
10.1002/art.41625
10.1096/fj.201901913R
10.1038/s41418-020-00667-x
10.1038/cr.2011.57
10.1016/j.bbrc.2022.07.011
10.1038/s41467-023-44349-x
10.1093/neuonc/noaa150
10.1038/nm.4474
10.1126/science.adh5021
10.1152/physrev.00025.2019
10.1096/fj.201802237R
10.1038/s41586-021-03819-2
10.1038/s41388-018-0354-5
10.1186/s12964-019-0392-9
10.1083/jcb.201110067
10.1016/j.cell.2017.04.023
10.1016/j.ccell.2020.01.011
10.1146/annurev-biochem-062917-011931
10.1172/JCI200422220
10.1093/hmg/dds070
10.1128/JVI.00340-17
10.4161/cc.29209
10.1016/j.molcel.2010.05.002
10.1172/JCI32827
10.1002/ana.21805
10.1038/s41580-022-00500-y
10.1002/jcsm.13100
10.1016/j.celrep.2022.110538
10.1073/pnas.1704351114
10.1371/journal.pone.0290002
10.1074/jbc.M212057200
10.1016/j.pharmthera.2020.107526
10.1074/jbc.272.45.28557
10.1016/j.celrep.2021.108857
10.1038/ncomms1012
10.1038/80992
10.1074/jbc.M113.484816
10.1074/jbc.M100920200
10.1074/jbc.M115.664375
10.1002/path.1283
10.1126/sciadv.add4969
10.1038/s41419-017-0138-9
10.1038/ng.2772
10.1093/neuonc/nov066
10.1038/sj.emboj.7600426
10.1016/j.molcel.2023.04.023
10.2353/ajpath.2006.051067
10.1126/sciadv.abq7585
10.1371/journal.pone.0120329
10.1016/j.bbrc.2007.12.066
10.1074/jbc.M310114200
10.1038/s41467-018-03509-0
10.1074/jbc.M111.261032
10.1172/JCI74994
10.1016/j.celrep.2019.04.107
10.1038/s41573-021-00371-6
10.1016/j.cmet.2007.09.009
10.1038/s41477-020-0721-4
10.1016/j.molcel.2023.05.018
10.1074/jbc.M411346200
10.1038/s41579-018-0020-5
10.1002/jcsm.12249
10.1126/scitranslmed.add4248
10.1038/nn.3367
10.1038/cr.2013.16
10.1016/j.cell.2020.02.017
10.1038/s41556-020-0559-z
10.1074/jbc.275.11.7462
10.1074/jbc.M510127200
10.1038/s41467-021-25272-5
10.1126/scitranslmed.aba7791
10.1016/j.cell.2021.08.029
10.26508/lsa.202201463
10.1186/s13578-023-01024-4
10.1073/pnas.052706799
10.1128/MCB.25.9.3483-3491.2005
10.1074/jbc.RA118.005406
10.1038/ncomms9163
10.1038/s41467-019-11549-3
10.1111/j.1365-2990.2004.00603.x
10.1172/JCI127374
10.1038/ncomms1752
10.1016/j.molcel.2017.10.028
10.1073/pnas.1417548111
10.1111/febs.12745
10.1083/jcb.200901052
10.1038/s41467-018-05776-3
10.1016/j.celrep.2017.01.035
10.1016/j.bbamcr.2013.05.008
10.1096/fj.11-180968
10.1074/jbc.M108636200
10.1016/j.molcel.2010.12.020
10.1073/pnas.2306152120
10.1038/nature08659
10.1016/j.tibs.2020.11.005
10.1093/jmcb/mjy036
10.1126/sciadv.adh3635
10.1073/pnas.0404341102
10.1111/cts.12972
10.1016/j.immuni.2016.08.014
ContentType Journal Article
Copyright 2024 Elsevier Ltd
Copyright © 2024 Elsevier Ltd. All rights reserved.
Copyright_xml – notice: 2024 Elsevier Ltd
– notice: Copyright © 2024 Elsevier Ltd. All rights reserved.
DBID AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
DOI 10.1016/j.molmed.2024.05.005
DatabaseName CrossRef
Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
MEDLINE - Academic
DatabaseTitle CrossRef
MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
MEDLINE - Academic
DatabaseTitleList
MEDLINE
MEDLINE - Academic

Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: 7X8
  name: MEDLINE - Academic
  url: https://search.proquest.com/medline
  sourceTypes: Aggregation Database
DeliveryMethod fulltext_linktorsrc
Discipline Medicine
Biology
EISSN 1471-499X
EndPage 1075
ExternalDocumentID 38851992
10_1016_j_molmed_2024_05_005
S1471491424001278
Genre Journal Article
Review
GroupedDBID ---
--K
--M
.1-
.FO
.~1
0R~
123
1B1
1P~
1RT
1~.
1~5
29Q
4.4
457
4G.
53G
5VS
7-5
71M
8P~
AAEDT
AAEDW
AAIKJ
AAKOC
AALRI
AAMRU
AAOAW
AAQFI
AAQXK
AATTM
AAXKI
AAXUO
AAYWO
ABBQC
ABFNM
ABGSF
ABJNI
ABMAC
ABMZM
ABUDA
ABWVN
ABXDB
ACDAQ
ACGFS
ACIEU
ACIWK
ACLOT
ACPRK
ACRLP
ACRPL
ACVFH
ADBBV
ADCNI
ADEZE
ADMUD
ADNMO
ADUVX
AEBSH
AEHWI
AEIPS
AEKER
AENEX
AEUPX
AEVXI
AFPUW
AFRAH
AFRHN
AFTJW
AFXIZ
AGHFR
AGQPQ
AGRDE
AGUBO
AGYEJ
AIEXJ
AIGII
AIIUN
AIKHN
AITUG
AJRQY
AJUYK
AKBMS
AKRWK
AKYEP
ALMA_UNASSIGNED_HOLDINGS
AMRAJ
ANKPU
ANZVX
APXCP
ASPBG
AVWKF
AXJTR
AZFZN
BKOJK
BLXMC
BNPGV
CS3
DU5
EBS
EFJIC
EFKBS
EFLBG
EJD
EO8
EO9
EP2
EP3
F5P
FDB
FEDTE
FGOYB
FIRID
FNPLU
FYGXN
G-Q
GBLVA
HVGLF
HZ~
IHE
J1W
K-O
KOM
L7B
M41
MO0
N9A
O-L
O9-
O9.
OAUVE
OK~
OZT
P-8
P-9
PC.
Q38
R2-
ROL
RPZ
SCC
SDF
SDG
SDP
SES
SEW
SPCBC
SSH
SSU
SSZ
T5K
Z5R
~G-
~HD
AACTN
AFCTW
RIG
9DU
AAYXX
CITATION
CGR
CUY
CVF
ECM
EIF
NPM
7X8
ID FETCH-LOGICAL-c415t-449fd786773fca91d2e4bda9b5f03fbe7571ff87f40fc5ca9cea3f9f6af01c633
ISICitedReferencesCount 10
ISICitedReferencesURI http://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=Summon&SrcAuth=ProQuest&DestLinkType=CitingArticles&DestApp=WOS_CPL&KeyUT=001357304900001&url=https%3A%2F%2Fcvtisr.summon.serialssolutions.com%2F%23%21%2Fsearch%3Fho%3Df%26include.ft.matches%3Dt%26l%3Dnull%26q%3D
ISSN 1471-4914
1471-499X
IngestDate Thu Oct 02 09:50:42 EDT 2025
Thu Apr 03 07:02:27 EDT 2025
Tue Nov 18 21:55:52 EST 2025
Sat Nov 29 06:40:12 EST 2025
Sun Apr 06 06:54:46 EDT 2025
Tue Oct 14 19:28:21 EDT 2025
IsPeerReviewed true
IsScholarly true
Issue 11
Keywords neurodegenerative diseases
proteasome regulators
ubiquitin-like modification
proteasomal degradation
ubiquitin-like proteasome system
muscle wasting diseases
Language English
License Copyright © 2024 Elsevier Ltd. All rights reserved.
LinkModel OpenURL
MergedId FETCHMERGED-LOGICAL-c415t-449fd786773fca91d2e4bda9b5f03fbe7571ff87f40fc5ca9cea3f9f6af01c633
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
ObjectType-Review-3
content type line 23
PMID 38851992
PQID 3065982346
PQPubID 23479
PageCount 15
ParticipantIDs proquest_miscellaneous_3065982346
pubmed_primary_38851992
crossref_citationtrail_10_1016_j_molmed_2024_05_005
crossref_primary_10_1016_j_molmed_2024_05_005
elsevier_sciencedirect_doi_10_1016_j_molmed_2024_05_005
elsevier_clinicalkey_doi_10_1016_j_molmed_2024_05_005
PublicationCentury 2000
PublicationDate November 2024
2024-11-00
2024-Nov
20241101
PublicationDateYYYYMMDD 2024-11-01
PublicationDate_xml – month: 11
  year: 2024
  text: November 2024
PublicationDecade 2020
PublicationPlace England
PublicationPlace_xml – name: England
PublicationTitle Trends in molecular medicine
PublicationTitleAlternate Trends Mol Med
PublicationYear 2024
Publisher Elsevier Ltd
Publisher_xml – name: Elsevier Ltd
References Cohen (bb0330) 2012; 198
Polge (bb0325) 2011; 25
Cong (bb0370) 2011; 22
Polge (bb0335) 2018; 9
Aichem (bb0110) 2012; 125
van den Boom, Meyer (bb0210) 2018; 69
Li (bb0010) 2020; 6
Wu (bb0225) 2011; 21
Hu (bb0265) 2016; 45
Mueller (bb0120) 2023; 18
Liu (bb0275) 2017; 91
Tanji (bb0440) 2006; 169
Son (bb0135) 2023; 9
Wang (bb0185) 2020; 211
Nagashima (bb0470) 2011; 286
Lu (bb0245) 2023; 35
Huang (bb0145) 2014; 13
Hua (bb0505) 2015; 17
Sartori (bb0365) 2013; 45
Luo (bb0260) 2014; 111
Cohen (bb0320) 2009; 185
Kamitani (bb0060) 2001; 276
Yang (bb0515) 2019; 17
Makaros (bb0025) 2023; 83
Tintignac (bb0310) 2005; 280
Stadtmueller, Hill (bb0180) 2011; 41
Li (bb0350) 2004; 114
Vertegaal (bb0130) 2022; 23
Bialas (bb0240) 2019; 294
Mori (bb0435) 2005; 31
Aichem (bb0090) 2018; 9
Hou (bb0380) 2021; 73
Hipp (bb0085) 2005; 25
Dil Kuazi (bb0430) 2003; 199
Dorval, Fraser (bb0450) 2006; 281
Kudriaeva (bb0220) 2019; 33
Lu (bb0465) 2013; 16
Aichem (bb0095) 2010; 1
Aichem (bb0100) 2014; 281
Liu (bb0215) 2013; 288
Garg (bb0345) 2014; 124
Choo (bb0445) 2012; 21
Tecalco-Cruz (bb0510) 2022; 621
Hyer (bb0070) 2018; 24
Rodriguez-Muela (bb0410) 2017; 18
Bard (bb0195) 2018; 87
Hipp (bb0200) 2004; 279
Zhang (bb0495) 2020; 22
Perng, Lenschow (bb0140) 2018; 16
Brockmann (bb0205) 2023; 6
Jumper (bb0525) 2021; 596
Kassouf (bb0460) 2023; 9
Chang, Yeh (bb0125) 2020; 100
Kamitani (bb0375) 1997; 272
Furukawa (bb0165) 2000; 275
Heras (bb0400) 2019; 11
Erales, Coffino (bb0005) 2014; 1843
Groll (bb0040) 2000; 7
Zhu (bb0500) 2024; 15
Sriramachandran (bb0255) 2019; 10
Bialas (bb0235) 2015; 10
Békés (bb0490) 2022; 21
Huang (bb0015) 2021; 184
Du (bb0150) 2023; 16
Kedar (bb0360) 2004; 101
Thibaudeau (bb0420) 2018; 9
Li (bb0280) 2015; 290
Sinam (bb0305) 2022; 13
Gu (bb0030) 2023; 381
Lightcap (bb0485) 2021; 13
Anjum (bb0175) 2015; 6
Rani (bb0105) 2012; 3
Salajegheh (bb0390) 2010; 67
Holmberg (bb0425) 2004; 23
Durfee (bb0160) 2010; 38
Kumar (bb0065) 2019; 129
Yoo (bb0475) 2018; 9
Vaughan (bb0045) 2021; 46
Lee (bb0250) 2018; 37
Collins, Goldberg (bb0190) 2017; 169
Humbard (bb0170) 2010; 463
Kito (bb0050) 2001; 276
Le Guerroué, Youle (bb0415) 2021; 28
Ju (bb0035) 2023; 120
Clarke (bb0315) 2007; 6
Tao (bb0230) 2013; 23
Rott (bb0270) 2017; 114
Lee (bb0455) 2008; 366
Chen (bb0155) 2023; 13
Liang (bb0290) 2020; 180
Roverato (bb0115) 2021; 34
Riboldi (bb0405) 2021; 12
Tsui (bb0340) 2023; 15
Hwang (bb0020) 2019; 146
Zhou (bb0480) 2021; 14
Wang (bb0075) 2022; 38
Asher (bb0520) 2002; 99
Liu (bb0285) 2020; 22
Ishimura (bb0295) 2023; 9
McGrail (bb0080) 2020; 37
Tanaka (bb0055) 2003; 278
Namuduri (bb0385) 2020; 34
Yiu (bb0300) 2023; 83
Nayak (bb0395) 2019; 27
Fielitz (bb0355) 2007; 117
Brockmann (10.1016/j.molmed.2024.05.005_bb0205) 2023; 6
Luo (10.1016/j.molmed.2024.05.005_bb0260) 2014; 111
Liang (10.1016/j.molmed.2024.05.005_bb0290) 2020; 180
Makaros (10.1016/j.molmed.2024.05.005_bb0025) 2023; 83
Heras (10.1016/j.molmed.2024.05.005_bb0400) 2019; 11
Tecalco-Cruz (10.1016/j.molmed.2024.05.005_bb0510) 2022; 621
Zhu (10.1016/j.molmed.2024.05.005_bb0500) 2024; 15
Rott (10.1016/j.molmed.2024.05.005_bb0270) 2017; 114
Gu (10.1016/j.molmed.2024.05.005_bb0030) 2023; 381
Tanaka (10.1016/j.molmed.2024.05.005_bb0055) 2003; 278
Huang (10.1016/j.molmed.2024.05.005_bb0015) 2021; 184
Tanji (10.1016/j.molmed.2024.05.005_bb0440) 2006; 169
Furukawa (10.1016/j.molmed.2024.05.005_bb0165) 2000; 275
Cong (10.1016/j.molmed.2024.05.005_bb0370) 2011; 22
Son (10.1016/j.molmed.2024.05.005_bb0135) 2023; 9
Hipp (10.1016/j.molmed.2024.05.005_bb0085) 2005; 25
Chen (10.1016/j.molmed.2024.05.005_bb0155) 2023; 13
Kito (10.1016/j.molmed.2024.05.005_bb0050) 2001; 276
McGrail (10.1016/j.molmed.2024.05.005_bb0080) 2020; 37
Riboldi (10.1016/j.molmed.2024.05.005_bb0405) 2021; 12
Le Guerroué (10.1016/j.molmed.2024.05.005_bb0415) 2021; 28
Hwang (10.1016/j.molmed.2024.05.005_bb0020) 2019; 146
Békés (10.1016/j.molmed.2024.05.005_bb0490) 2022; 21
Mueller (10.1016/j.molmed.2024.05.005_bb0120) 2023; 18
Li (10.1016/j.molmed.2024.05.005_bb0280) 2015; 290
Kudriaeva (10.1016/j.molmed.2024.05.005_bb0220) 2019; 33
Mori (10.1016/j.molmed.2024.05.005_bb0435) 2005; 31
Asher (10.1016/j.molmed.2024.05.005_bb0520) 2002; 99
Wang (10.1016/j.molmed.2024.05.005_bb0185) 2020; 211
Chang (10.1016/j.molmed.2024.05.005_bb0125) 2020; 100
Lu (10.1016/j.molmed.2024.05.005_bb0465) 2013; 16
Wang (10.1016/j.molmed.2024.05.005_bb0075) 2022; 38
Aichem (10.1016/j.molmed.2024.05.005_bb0095) 2010; 1
Anjum (10.1016/j.molmed.2024.05.005_bb0175) 2015; 6
Zhou (10.1016/j.molmed.2024.05.005_bb0480) 2021; 14
Garg (10.1016/j.molmed.2024.05.005_bb0345) 2014; 124
Dorval (10.1016/j.molmed.2024.05.005_bb0450) 2006; 281
Yoo (10.1016/j.molmed.2024.05.005_bb0475) 2018; 9
Kamitani (10.1016/j.molmed.2024.05.005_bb0375) 1997; 272
Perng (10.1016/j.molmed.2024.05.005_bb0140) 2018; 16
Liu (10.1016/j.molmed.2024.05.005_bb0285) 2020; 22
Hua (10.1016/j.molmed.2024.05.005_bb0505) 2015; 17
Rodriguez-Muela (10.1016/j.molmed.2024.05.005_bb0410) 2017; 18
Hou (10.1016/j.molmed.2024.05.005_bb0380) 2021; 73
Lee (10.1016/j.molmed.2024.05.005_bb0250) 2018; 37
Ishimura (10.1016/j.molmed.2024.05.005_bb0295) 2023; 9
Tintignac (10.1016/j.molmed.2024.05.005_bb0310) 2005; 280
Liu (10.1016/j.molmed.2024.05.005_bb0275) 2017; 91
Polge (10.1016/j.molmed.2024.05.005_bb0325) 2011; 25
Tsui (10.1016/j.molmed.2024.05.005_bb0340) 2023; 15
Bialas (10.1016/j.molmed.2024.05.005_bb0240) 2019; 294
Hu (10.1016/j.molmed.2024.05.005_bb0265) 2016; 45
Durfee (10.1016/j.molmed.2024.05.005_bb0160) 2010; 38
Humbard (10.1016/j.molmed.2024.05.005_bb0170) 2010; 463
Ju (10.1016/j.molmed.2024.05.005_bb0035) 2023; 120
Aichem (10.1016/j.molmed.2024.05.005_bb0090) 2018; 9
Roverato (10.1016/j.molmed.2024.05.005_bb0115) 2021; 34
Aichem (10.1016/j.molmed.2024.05.005_bb0110) 2012; 125
Sinam (10.1016/j.molmed.2024.05.005_bb0305) 2022; 13
Nagashima (10.1016/j.molmed.2024.05.005_bb0470) 2011; 286
Erales (10.1016/j.molmed.2024.05.005_bb0005) 2014; 1843
Namuduri (10.1016/j.molmed.2024.05.005_bb0385) 2020; 34
Lightcap (10.1016/j.molmed.2024.05.005_bb0485) 2021; 13
Holmberg (10.1016/j.molmed.2024.05.005_bb0425) 2004; 23
Lee (10.1016/j.molmed.2024.05.005_bb0455) 2008; 366
Nayak (10.1016/j.molmed.2024.05.005_bb0395) 2019; 27
Groll (10.1016/j.molmed.2024.05.005_bb0040) 2000; 7
Tao (10.1016/j.molmed.2024.05.005_bb0230) 2013; 23
Yiu (10.1016/j.molmed.2024.05.005_bb0300) 2023; 83
Collins (10.1016/j.molmed.2024.05.005_bb0190) 2017; 169
Lu (10.1016/j.molmed.2024.05.005_bb0245) 2023; 35
Clarke (10.1016/j.molmed.2024.05.005_bb0315) 2007; 6
Jumper (10.1016/j.molmed.2024.05.005_bb0525) 2021; 596
Polge (10.1016/j.molmed.2024.05.005_bb0335) 2018; 9
Hyer (10.1016/j.molmed.2024.05.005_bb0070) 2018; 24
Aichem (10.1016/j.molmed.2024.05.005_bb0100) 2014; 281
Stadtmueller (10.1016/j.molmed.2024.05.005_bb0180) 2011; 41
Huang (10.1016/j.molmed.2024.05.005_bb0145) 2014; 13
Vaughan (10.1016/j.molmed.2024.05.005_bb0045) 2021; 46
Salajegheh (10.1016/j.molmed.2024.05.005_bb0390) 2010; 67
Hipp (10.1016/j.molmed.2024.05.005_bb0200) 2004; 279
Cohen (10.1016/j.molmed.2024.05.005_bb0330) 2012; 198
Vertegaal (10.1016/j.molmed.2024.05.005_bb0130) 2022; 23
Kedar (10.1016/j.molmed.2024.05.005_bb0360) 2004; 101
Sartori (10.1016/j.molmed.2024.05.005_bb0365) 2013; 45
Kassouf (10.1016/j.molmed.2024.05.005_bb0460) 2023; 9
Zhang (10.1016/j.molmed.2024.05.005_bb0495) 2020; 22
Choo (10.1016/j.molmed.2024.05.005_bb0445) 2012; 21
Li (10.1016/j.molmed.2024.05.005_bb0010) 2020; 6
Wu (10.1016/j.molmed.2024.05.005_bb0225) 2011; 21
Cohen (10.1016/j.molmed.2024.05.005_bb0320) 2009; 185
Kamitani (10.1016/j.molmed.2024.05.005_bb0060) 2001; 276
Bialas (10.1016/j.molmed.2024.05.005_bb0235) 2015; 10
Sriramachandran (10.1016/j.molmed.2024.05.005_bb0255) 2019; 10
Dil Kuazi (10.1016/j.molmed.2024.05.005_bb0430) 2003; 199
Fielitz (10.1016/j.molmed.2024.05.005_bb0355) 2007; 117
Bard (10.1016/j.molmed.2024.05.005_bb0195) 2018; 87
Liu (10.1016/j.molmed.2024.05.005_bb0215) 2013; 288
van den Boom (10.1016/j.molmed.2024.05.005_bb0210) 2018; 69
Du (10.1016/j.molmed.2024.05.005_bb0150) 2023; 16
Li (10.1016/j.molmed.2024.05.005_bb0350) 2004; 114
Thibaudeau (10.1016/j.molmed.2024.05.005_bb0420) 2018; 9
Rani (10.1016/j.molmed.2024.05.005_bb0105) 2012; 3
Kumar (10.1016/j.molmed.2024.05.005_bb0065) 2019; 129
Yang (10.1016/j.molmed.2024.05.005_bb0515) 2019; 17
References_xml – volume: 146
  year: 2019
  ident: bb0020
  article-title: Novel functions of the ubiquitin-independent proteasome system in regulating Xenopus germline development
  publication-title: Development
– volume: 16
  year: 2023
  ident: bb0150
  article-title: The E3 ligase HERC5 promotes antimycobacterial responses in macrophages by ISGylating the phosphatase PTEN
  publication-title: Sci. Signal.
– volume: 124
  start-page: 3529
  year: 2014
  end-page: 3539
  ident: bb0345
  article-title: KLHL40 deficiency destabilizes thin filament proteins and promotes nemaline myopathy
  publication-title: J. Clin. Invest.
– volume: 7
  start-page: 1062
  year: 2000
  end-page: 1067
  ident: bb0040
  article-title: A gated channel into the proteasome core particle
  publication-title: Nat. Struct. Biol.
– volume: 14
  start-page: 1069
  year: 2021
  end-page: 1081
  ident: bb0480
  article-title: Asia-inclusive global development of pevonedistat: Clinical pharmacology and translational research enabling a phase 3 multiregional clinical trial
  publication-title: Clin. Transl. Sci.
– volume: 117
  start-page: 2486
  year: 2007
  end-page: 2495
  ident: bb0355
  article-title: Myosin accumulation and striated muscle myopathy result from the loss of muscle RING finger 1 and 3
  publication-title: J. Clin. Invest.
– volume: 83
  start-page: 1921
  year: 2023
  end-page: 1935.e1927
  ident: bb0025
  article-title: Ubiquitin-independent proteasomal degradation driven by C-degron pathways
  publication-title: Mol. Cell
– volume: 25
  start-page: 3790
  year: 2011
  end-page: 3802
  ident: bb0325
  article-title: Muscle actin is polyubiquitinylated in vitro and in vivo and targeted for breakdown by the E3 ligase MuRF1
  publication-title: FASEB J.
– volume: 13
  year: 2021
  ident: bb0485
  article-title: A small-molecule SUMOylation inhibitor activates antitumor immune responses and potentiates immune therapies in preclinical models
  publication-title: Sci. Transl. Med.
– volume: 276
  start-page: 20603
  year: 2001
  end-page: 20609
  ident: bb0050
  article-title: NUB1, a NEDD8-interacting protein, is induced by interferon and down-regulates the NEDD8 expression
  publication-title: J. Biol. Chem.
– volume: 129
  start-page: 4477
  year: 2019
  end-page: 4491
  ident: bb0065
  article-title: Degradation of splicing factor SRSF3 contributes to progressive liver disease
  publication-title: J. Clin. Invest.
– volume: 11
  start-page: 356
  year: 2019
  end-page: 370
  ident: bb0400
  article-title: Muscle RING-finger protein-1 (MuRF1) functions and cellular localization are regulated by SUMO1 post-translational modification
  publication-title: J. Mol. Cell Biol.
– volume: 9
  start-page: 129
  year: 2018
  end-page: 145
  ident: bb0335
  article-title: A muscle-specific MuRF1-E2 network requires stabilization of MuRF1-E2 complexes by telethonin, a newly identified substrate
  publication-title: J. Cachexia. Sarcopenia Muscle
– volume: 275
  start-page: 7462
  year: 2000
  end-page: 7465
  ident: bb0165
  article-title: A protein conjugation system in yeast with homology to biosynthetic enzyme reaction of prokaryotes
  publication-title: J. Biol. Chem.
– volume: 23
  start-page: 715
  year: 2022
  end-page: 731
  ident: bb0130
  article-title: Signalling mechanisms and cellular functions of SUMO
  publication-title: Nat. Rev. Mol. Cell Biol.
– volume: 37
  start-page: 5552
  year: 2018
  end-page: 5568
  ident: bb0250
  article-title: The E3 ligase C-CBL inhibits cancer cell migration by neddylating the proto-oncogene c-Src
  publication-title: Oncogene
– volume: 185
  start-page: 1083
  year: 2009
  end-page: 1095
  ident: bb0320
  article-title: During muscle atrophy, thick, but not thin, filament components are degraded by MuRF1-dependent ubiquitylation
  publication-title: J. Cell Biol.
– volume: 13
  start-page: 2200
  year: 2014
  end-page: 2210
  ident: bb0145
  article-title: Isg15 controls p53 stability and functions
  publication-title: Cell Cycle
– volume: 87
  start-page: 697
  year: 2018
  end-page: 724
  ident: bb0195
  article-title: Structure and function of the 26S proteasome
  publication-title: Annu. Rev. Biochem.
– volume: 366
  start-page: 976
  year: 2008
  end-page: 981
  ident: bb0455
  article-title: Inhibition of APP intracellular domain (AICD) transcriptional activity via covalent conjugation with Nedd8
  publication-title: Biochem. Biophys. Res. Commun.
– volume: 279
  start-page: 16503
  year: 2004
  end-page: 16510
  ident: bb0200
  article-title: NEDD8 ultimate buster-1L interacts with the ubiquitin-like protein FAT10 and accelerates its degradation
  publication-title: J. Biol. Chem.
– volume: 294
  start-page: 4315
  year: 2019
  end-page: 4330
  ident: bb0240
  article-title: The ubiquitin-like modifier FAT10 stimulates the activity of deubiquitylating enzyme OTUB1
  publication-title: J. Biol. Chem.
– volume: 114
  start-page: 1058
  year: 2004
  end-page: 1071
  ident: bb0350
  article-title: Atrogin-1/muscle atrophy F-box inhibits calcineurin-dependent cardiac hypertrophy by participating in an SCF ubiquitin ligase complex
  publication-title: J. Clin. Invest.
– volume: 31
  start-page: 53
  year: 2005
  end-page: 61
  ident: bb0435
  article-title: Accumulation of NEDD8 in neuronal and glial inclusions of neurodegenerative disorders
  publication-title: Neuropathol. Appl. Neurobiol.
– volume: 101
  start-page: 18135
  year: 2004
  end-page: 18140
  ident: bb0360
  article-title: Muscle-specific RING finger 1 is a bona fide ubiquitin ligase that degrades cardiac troponin I
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
– volume: 45
  start-page: 1309
  year: 2013
  end-page: 1318
  ident: bb0365
  article-title: BMP signaling controls muscle mass
  publication-title: Nat. Genet.
– volume: 99
  start-page: 3099
  year: 2002
  end-page: 3104
  ident: bb0520
  article-title: NQO1 stabilizes p53 through a distinct pathway
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
– volume: 34
  year: 2021
  ident: bb0115
  article-title: Parkin is an E3 ligase for the ubiquitin-like modifier FAT10, which inhibits Parkin activation and mitophagy
  publication-title: Cell Rep.
– volume: 23
  start-page: 4307
  year: 2004
  end-page: 4318
  ident: bb0425
  article-title: Inefficient degradation of truncated polyglutamine proteins by the proteasome
  publication-title: EMBO J.
– volume: 22
  start-page: 1056
  year: 2020
  end-page: 1063
  ident: bb0285
  article-title: UFMylation maintains tumour suppressor p53 stability by antagonizing its ubiquitination
  publication-title: Nat. Cell Biol.
– volume: 17
  start-page: 82
  year: 2019
  ident: bb0515
  article-title: SAE1 promotes human glioma progression through activating AKT SUMOylation-mediated signaling pathways
  publication-title: Cell Commun. Signal.
– volume: 67
  start-page: 53
  year: 2010
  end-page: 63
  ident: bb0390
  article-title: Interferon-stimulated gene 15 (ISG15) conjugates proteins in dermatomyositis muscle with perifascicular atrophy
  publication-title: Ann. Neurol.
– volume: 198
  start-page: 575
  year: 2012
  end-page: 589
  ident: bb0330
  article-title: Ubiquitylation by Trim32 causes coupled loss of desmin, Z-bands, and thin filaments in muscle atrophy
  publication-title: J. Cell Biol.
– volume: 21
  start-page: 2514
  year: 2012
  end-page: 2523
  ident: bb0445
  article-title: Regulation of parkin and PINK1 by neddylation
  publication-title: Hum. Mol. Genet.
– volume: 169
  start-page: 553
  year: 2006
  end-page: 565
  ident: bb0440
  article-title: NUB1 suppresses the formation of Lewy body-like inclusions by proteasomal degradation of synphilin-1
  publication-title: Am. J. Pathol.
– volume: 6
  start-page: 376
  year: 2007
  end-page: 385
  ident: bb0315
  article-title: The E3 Ligase MuRF1 degrades myosin heavy chain protein in dexamethasone-treated skeletal muscle
  publication-title: Cell Metab.
– volume: 211
  year: 2020
  ident: bb0185
  article-title: Exploring the proteasome system: A novel concept of proteasome inhibition and regulation
  publication-title: Pharmacol. Ther.
– volume: 280
  start-page: 2847
  year: 2005
  end-page: 2856
  ident: bb0310
  article-title: Degradation of MyoD mediated by the SCF (MAFbx) ubiquitin ligase
  publication-title: J. Biol. Chem.
– volume: 91
  year: 2017
  ident: bb0275
  article-title: HDM2 promotes NEDDylation of hepatitis B virus HBx to enhance its stability and function
  publication-title: J. Virol.
– volume: 18
  start-page: 1484
  year: 2017
  end-page: 1498
  ident: bb0410
  article-title: Single-cell analysis of SMN reveals its broader role in neuromuscular disease
  publication-title: Cell Rep.
– volume: 1
  start-page: 13
  year: 2010
  ident: bb0095
  article-title: USE1 is a bispecific conjugating enzyme for ubiquitin and FAT10, which FAT10ylates itself in cis
  publication-title: Nat. Commun.
– volume: 41
  start-page: 8
  year: 2011
  end-page: 19
  ident: bb0180
  article-title: Proteasome activators
  publication-title: Mol. Cell
– volume: 9
  year: 2023
  ident: bb0295
  article-title: Mechanistic insights into the roles of the UFM1 E3 ligase complex in ufmylation and ribosome-associated protein quality control
  publication-title: Sci. Adv.
– volume: 69
  start-page: 182
  year: 2018
  end-page: 194
  ident: bb0210
  article-title: VCP/p97-mediated unfolding as a principle in protein homeostasis and signaling
  publication-title: Mol. Cell
– volume: 16
  start-page: 423
  year: 2018
  end-page: 439
  ident: bb0140
  article-title: ISG15 in antiviral immunity and beyond
  publication-title: Nat. Rev. Microbiol.
– volume: 272
  start-page: 28557
  year: 1997
  end-page: 28562
  ident: bb0375
  article-title: Characterization of NEDD8, a developmentally down-regulated ubiquitin-like protein
  publication-title: J. Biol. Chem.
– volume: 463
  start-page: 54
  year: 2010
  end-page: 60
  ident: bb0170
  article-title: Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii
  publication-title: Nature
– volume: 596
  start-page: 583
  year: 2021
  end-page: 589
  ident: bb0525
  article-title: Highly accurate protein structure prediction with AlphaFold
  publication-title: Nature
– volume: 25
  start-page: 3483
  year: 2005
  end-page: 3491
  ident: bb0085
  article-title: FAT10, a ubiquitin-independent signal for proteasomal degradation
  publication-title: Mol. Cell. Biol.
– volume: 34
  start-page: 2269
  year: 2020
  end-page: 2286
  ident: bb0385
  article-title: Expression of SUMO enzymes is fiber type dependent in skeletal muscles and is dysregulated in muscle disuse
  publication-title: FASEB J.
– volume: 9
  year: 2023
  ident: bb0135
  article-title: SUMOylation-mediated PSME3-20S proteasomal degradation of transcription factor CP2c is crucial for cell cycle progression
  publication-title: Sci. Adv.
– volume: 199
  start-page: 259
  year: 2003
  end-page: 266
  ident: bb0430
  article-title: NEDD8 protein is involved in ubiquitinated inclusion bodies
  publication-title: J. Pathol.
– volume: 21
  start-page: 807
  year: 2011
  end-page: 816
  ident: bb0225
  article-title: Regulation of REGγ cellular distribution and function by SUMO modification
  publication-title: Cell Res.
– volume: 114
  start-page: 13176
  year: 2017
  end-page: 13181
  ident: bb0270
  article-title: SUMOylation and ubiquitination reciprocally regulate α-synuclein degradation and pathological aggregation
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
– volume: 184
  start-page: 5201
  year: 2021
  end-page: 5214.e5212
  ident: bb0015
  article-title: Parasitic modulation of host development by ubiquitin-independent protein degradation
  publication-title: Cell
– volume: 276
  start-page: 46655
  year: 2001
  end-page: 46660
  ident: bb0060
  article-title: Targeting of NEDD8 and its conjugates for proteasomal degradation by NUB1
  publication-title: J. Biol. Chem.
– volume: 381
  year: 2023
  ident: bb0030
  article-title: The midnolin-proteasome pathway catches proteins for ubiquitination-independent degradation
  publication-title: Science
– volume: 37
  start-page: 371
  year: 2020
  end-page: 386.e312
  ident: bb0080
  article-title: Proteome instability is a therapeutic vulnerability in mismatch repair-deficient cancer
  publication-title: Cancer Cell
– volume: 9
  start-page: 1097
  year: 2018
  ident: bb0420
  article-title: A common mechanism of proteasome impairment by neurodegenerative disease-associated oligomers
  publication-title: Nat. Commun.
– volume: 100
  start-page: 1599
  year: 2020
  end-page: 1619
  ident: bb0125
  article-title: SUMO: From Bench to Bedside
  publication-title: Physiol. Rev.
– volume: 27
  year: 2019
  ident: bb0395
  article-title: Regulation of SETD7 Methyltransferase by SENP3 Is Crucial for Sarcomere Organization and Cachexia
  publication-title: Cell Rep.
– volume: 286
  start-page: 29594
  year: 2011
  end-page: 29600
  ident: bb0470
  article-title: FAT10 protein binds to polyglutamine proteins and modulates their solubility
  publication-title: J. Biol. Chem.
– volume: 9
  start-page: 97
  year: 2018
  ident: bb0475
  article-title: Covalent ISG15 conjugation to CHIP promotes its ubiquitin E3 ligase activity and inhibits lung cancer cell growth in response to type I interferon
  publication-title: Cell Death Dis.
– volume: 83
  start-page: 2367
  year: 2023
  end-page: 2386.e2315
  ident: bb0300
  article-title: An Epstein-Barr virus protein interaction map reveals NLRP3 inflammasome evasion via MAVS UFMylation
  publication-title: Mol. Cell
– volume: 281
  start-page: 9919
  year: 2006
  end-page: 9924
  ident: bb0450
  article-title: Small ubiquitin-like modifier (SUMO) modification of natively unfolded proteins tau and alpha-synuclein
  publication-title: J. Biol. Chem.
– volume: 18
  year: 2023
  ident: bb0120
  article-title: The ubiquitin-like modifier FAT10 covalently modifies HUWE1 and strengthens the interaction of AMBRA1 and HUWE1
  publication-title: PLoS One
– volume: 38
  start-page: 722
  year: 2010
  end-page: 732
  ident: bb0160
  article-title: The ISG15 conjugation system broadly targets newly synthesized proteins: implications for the antiviral function of ISG15
  publication-title: Mol. Cell
– volume: 9
  year: 2023
  ident: bb0460
  article-title: Targeting the NEDP1 enzyme to ameliorate ALS phenotypes through stress granule disassembly
  publication-title: Sci. Adv.
– volume: 9
  start-page: 3321
  year: 2018
  ident: bb0090
  article-title: The structure of the ubiquitin-like modifier FAT10 reveals an alternative targeting mechanism for proteasomal degradation
  publication-title: Nat. Commun.
– volume: 23
  start-page: 620
  year: 2013
  end-page: 634
  ident: bb0230
  article-title: Def defines a conserved nucleolar pathway that leads p53 to proteasome-independent degradation
  publication-title: Cell Res.
– volume: 621
  start-page: 144
  year: 2022
  end-page: 150
  ident: bb0510
  article-title: Interferon-stimulated gene 15 and ISGylation are upregulated in glioblastoma
  publication-title: Biochem. Biophys. Res. Commun.
– volume: 13
  start-page: 84
  year: 2023
  ident: bb0155
  article-title: ISG15 suppresses ovulation and female fertility by ISGylating ADAMTS1
  publication-title: Cell Biosci.
– volume: 169
  start-page: 792
  year: 2017
  end-page: 806
  ident: bb0190
  article-title: The logic of the 26S proteasome
  publication-title: Cell
– volume: 24
  start-page: 186
  year: 2018
  end-page: 193
  ident: bb0070
  article-title: A small-molecule inhibitor of the ubiquitin activating enzyme for cancer treatment
  publication-title: Nat. Med.
– volume: 22
  start-page: 1809
  year: 2020
  end-page: 1821
  ident: bb0495
  article-title: Protein sumoylation with SUMO1 promoted by Pin1 in glioma stem cells augments glioblastoma malignancy
  publication-title: Neuro-Oncology
– volume: 6
  year: 2023
  ident: bb0205
  article-title: FAT10 and NUB1L cooperate to activate the 26S proteasome
  publication-title: Life Sci. Alliance
– volume: 180
  start-page: 1160
  year: 2020
  end-page: 1177.e1120
  ident: bb0290
  article-title: A genome-wide ER-phagy screen highlights key roles of mitochondrial metabolism and ER-resident UFMylation
  publication-title: Cell
– volume: 35
  start-page: 1390
  year: 2023
  end-page: 1405.e1398
  ident: bb0245
  article-title: UBE2M-mediated neddylation of TRIM21 regulates obesity-induced inflammation and metabolic disorders
  publication-title: Cell Metab.
– volume: 10
  year: 2015
  ident: bb0235
  article-title: Conjugation of the ubiquitin activating enzyme UBE1 with the ubiquitin-like modifier FAT10 targets it for proteasomal degradation
  publication-title: PLoS One
– volume: 6
  start-page: 970
  year: 2020
  end-page: 982
  ident: bb0010
  article-title: Degradation of SERRATE via ubiquitin-independent 20S proteasome to survey RNA metabolism
  publication-title: Nat. Plants
– volume: 38
  year: 2022
  ident: bb0075
  article-title: Neddylation is essential for β-catenin degradation in Wnt signaling pathway
  publication-title: Cell Rep.
– volume: 17
  start-page: 1333
  year: 2015
  end-page: 1343
  ident: bb0505
  article-title: Suppression of glioblastoma by targeting the overactivated protein neddylation pathway
  publication-title: Neuro-Oncology
– volume: 16
  start-page: 562
  year: 2013
  end-page: 570
  ident: bb0465
  article-title: Identification of NUB1 as a suppressor of mutant Huntington toxicity via enhanced protein clearance
  publication-title: Nat. Neurosci.
– volume: 12
  start-page: 5040
  year: 2021
  ident: bb0405
  article-title: Sumoylation regulates the assembly and activity of the SMN complex
  publication-title: Nat. Commun.
– volume: 111
  start-page: 16586
  year: 2014
  end-page: 16591
  ident: bb0260
  article-title: SUMOylation at K340 inhibits tau degradation through deregulating its phosphorylation and ubiquitination
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
– volume: 288
  start-page: 31339
  year: 2013
  end-page: 31349
  ident: bb0215
  article-title: NEDD8 ultimate buster-1 long (NUB1L) protein promotes transfer of NEDD8 to proteasome for degradation through the P97UFD1/NPL4 complex
  publication-title: J. Biol. Chem.
– volume: 1843
  start-page: 216
  year: 2014
  end-page: 221
  ident: bb0005
  article-title: Ubiquitin-independent proteasomal degradation
  publication-title: Biochim. Biophys. Acta
– volume: 125
  start-page: 4576
  year: 2012
  end-page: 4585
  ident: bb0110
  article-title: The proteomic analysis of endogenous FAT10 substrates identifies p62/SQSTM1 as a substrate of FAT10ylation
  publication-title: J. Cell Sci.
– volume: 13
  start-page: 3122
  year: 2022
  end-page: 3136
  ident: bb0305
  article-title: Pyruvate dehydrogenase kinase 4 promotes ubiquitin-proteasome system-dependent muscle atrophy
  publication-title: J. Cachexia. Sarcopenia Muscle
– volume: 22
  start-page: 313
  year: 2011
  end-page: 324
  ident: bb0370
  article-title: Inhibition of atrogin-1/MAFbx expression by adenovirus-delivered small hairpin RNAs attenuates muscle atrophy in fasting mice
  publication-title: Hum. Gene Ther.
– volume: 15
  year: 2023
  ident: bb0340
  article-title: Desmosomal protein degradation as an underlying cause of arrhythmogenic cardiomyopathy
  publication-title: Sci. Transl. Med.
– volume: 120
  year: 2023
  ident: bb0035
  article-title: Homeostatic regulation of ribosomal proteins by ubiquitin-independent cotranslational degradation
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
– volume: 6
  start-page: 8163
  year: 2015
  ident: bb0175
  article-title: Involvement of a eukaryotic-like ubiquitin-related modifier in the proteasome pathway of the archaeon Sulfolobus acidocaldarius
  publication-title: Nat. Commun.
– volume: 15
  start-page: 40
  year: 2024
  ident: bb0500
  article-title: Stabilization of Pin1 by USP34 promotes Ubc9 isomerization and protein sumoylation in glioma stem cells
  publication-title: Nat. Commun.
– volume: 33
  start-page: 6852
  year: 2019
  end-page: 6866
  ident: bb0220
  article-title: Charge-mediated proteasome targeting
  publication-title: FASEB J.
– volume: 290
  start-page: 23850
  year: 2015
  end-page: 23862
  ident: bb0280
  article-title: NEDD8 Ultimate buster 1 long (NUB1L) protein suppresses atypical neddylation and promotes the proteasomal degradation of misfolded proteins
  publication-title: J. Biol. Chem.
– volume: 46
  start-page: 258
  year: 2021
  end-page: 269
  ident: bb0045
  article-title: Chromatin Regulation through Ubiquitin and Ubiquitin-like Histone Modifications
  publication-title: Trends Biochem. Sci.
– volume: 73
  start-page: 1044
  year: 2021
  end-page: 1052
  ident: bb0380
  article-title: From Diagnosis to Prognosis: Revisiting the Meaning of Muscle ISG15 Overexpression in Juvenile Inflammatory Myopathies
  publication-title: Arthritis Rheumatol.
– volume: 21
  start-page: 181
  year: 2022
  end-page: 200
  ident: bb0490
  article-title: PROTAC targeted protein degraders: the past is prologue
  publication-title: Nat. Rev. Drug Discov.
– volume: 3
  start-page: 749
  year: 2012
  ident: bb0105
  article-title: FAT10 and NUB1L bind to the VWA domain of Rpn10 and Rpn1 to enable proteasome-mediated proteolysis
  publication-title: Nat. Commun.
– volume: 45
  start-page: 555
  year: 2016
  end-page: 569
  ident: bb0265
  article-title: Sumoylation promotes the stability of the DNA sensor cGAS and the adaptor STING to regulate the kinetics of response to DNA virus
  publication-title: Immunity
– volume: 278
  start-page: 32905
  year: 2003
  end-page: 32913
  ident: bb0055
  article-title: Regulation of the NEDD8 conjugation system by a splicing variant, NUB1L
  publication-title: J. Biol. Chem.
– volume: 281
  start-page: 1848
  year: 2014
  end-page: 1859
  ident: bb0100
  article-title: Investigations into the auto-FAT10ylation of the bispecific E2 conjugating enzyme UBA6-specific E2 enzyme 1
  publication-title: FEBS J.
– volume: 28
  start-page: 439
  year: 2021
  end-page: 454
  ident: bb0415
  article-title: Ubiquitin signaling in neurodegenerative diseases: an autophagy and proteasome perspective
  publication-title: Cell Death Differ.
– volume: 10
  start-page: 3678
  year: 2019
  ident: bb0255
  article-title: Arkadia/RNF111 is a SUMO-targeted ubiquitin ligase with preference for substrates marked with SUMO1-capped SUMO2/3 chain
  publication-title: Nat. Commun.
– volume: 35
  start-page: 1390
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0245
  article-title: UBE2M-mediated neddylation of TRIM21 regulates obesity-induced inflammation and metabolic disorders
  publication-title: Cell Metab.
  doi: 10.1016/j.cmet.2023.05.011
– volume: 16
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0150
  article-title: The E3 ligase HERC5 promotes antimycobacterial responses in macrophages by ISGylating the phosphatase PTEN
  publication-title: Sci. Signal.
  doi: 10.1126/scisignal.abm1756
– volume: 22
  start-page: 313
  year: 2011
  ident: 10.1016/j.molmed.2024.05.005_bb0370
  article-title: Inhibition of atrogin-1/MAFbx expression by adenovirus-delivered small hairpin RNAs attenuates muscle atrophy in fasting mice
  publication-title: Hum. Gene Ther.
  doi: 10.1089/hum.2010.057
– volume: 73
  start-page: 1044
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0380
  article-title: From Diagnosis to Prognosis: Revisiting the Meaning of Muscle ISG15 Overexpression in Juvenile Inflammatory Myopathies
  publication-title: Arthritis Rheumatol.
  doi: 10.1002/art.41625
– volume: 34
  start-page: 2269
  year: 2020
  ident: 10.1016/j.molmed.2024.05.005_bb0385
  article-title: Expression of SUMO enzymes is fiber type dependent in skeletal muscles and is dysregulated in muscle disuse
  publication-title: FASEB J.
  doi: 10.1096/fj.201901913R
– volume: 28
  start-page: 439
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0415
  article-title: Ubiquitin signaling in neurodegenerative diseases: an autophagy and proteasome perspective
  publication-title: Cell Death Differ.
  doi: 10.1038/s41418-020-00667-x
– volume: 21
  start-page: 807
  year: 2011
  ident: 10.1016/j.molmed.2024.05.005_bb0225
  article-title: Regulation of REGγ cellular distribution and function by SUMO modification
  publication-title: Cell Res.
  doi: 10.1038/cr.2011.57
– volume: 621
  start-page: 144
  year: 2022
  ident: 10.1016/j.molmed.2024.05.005_bb0510
  article-title: Interferon-stimulated gene 15 and ISGylation are upregulated in glioblastoma
  publication-title: Biochem. Biophys. Res. Commun.
  doi: 10.1016/j.bbrc.2022.07.011
– volume: 15
  start-page: 40
  year: 2024
  ident: 10.1016/j.molmed.2024.05.005_bb0500
  article-title: Stabilization of Pin1 by USP34 promotes Ubc9 isomerization and protein sumoylation in glioma stem cells
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-023-44349-x
– volume: 22
  start-page: 1809
  year: 2020
  ident: 10.1016/j.molmed.2024.05.005_bb0495
  article-title: Protein sumoylation with SUMO1 promoted by Pin1 in glioma stem cells augments glioblastoma malignancy
  publication-title: Neuro-Oncology
  doi: 10.1093/neuonc/noaa150
– volume: 24
  start-page: 186
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0070
  article-title: A small-molecule inhibitor of the ubiquitin activating enzyme for cancer treatment
  publication-title: Nat. Med.
  doi: 10.1038/nm.4474
– volume: 381
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0030
  article-title: The midnolin-proteasome pathway catches proteins for ubiquitination-independent degradation
  publication-title: Science
  doi: 10.1126/science.adh5021
– volume: 100
  start-page: 1599
  year: 2020
  ident: 10.1016/j.molmed.2024.05.005_bb0125
  article-title: SUMO: From Bench to Bedside
  publication-title: Physiol. Rev.
  doi: 10.1152/physrev.00025.2019
– volume: 33
  start-page: 6852
  year: 2019
  ident: 10.1016/j.molmed.2024.05.005_bb0220
  article-title: Charge-mediated proteasome targeting
  publication-title: FASEB J.
  doi: 10.1096/fj.201802237R
– volume: 596
  start-page: 583
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0525
  article-title: Highly accurate protein structure prediction with AlphaFold
  publication-title: Nature
  doi: 10.1038/s41586-021-03819-2
– volume: 37
  start-page: 5552
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0250
  article-title: The E3 ligase C-CBL inhibits cancer cell migration by neddylating the proto-oncogene c-Src
  publication-title: Oncogene
  doi: 10.1038/s41388-018-0354-5
– volume: 17
  start-page: 82
  year: 2019
  ident: 10.1016/j.molmed.2024.05.005_bb0515
  article-title: SAE1 promotes human glioma progression through activating AKT SUMOylation-mediated signaling pathways
  publication-title: Cell Commun. Signal.
  doi: 10.1186/s12964-019-0392-9
– volume: 198
  start-page: 575
  year: 2012
  ident: 10.1016/j.molmed.2024.05.005_bb0330
  article-title: Ubiquitylation by Trim32 causes coupled loss of desmin, Z-bands, and thin filaments in muscle atrophy
  publication-title: J. Cell Biol.
  doi: 10.1083/jcb.201110067
– volume: 169
  start-page: 792
  year: 2017
  ident: 10.1016/j.molmed.2024.05.005_bb0190
  article-title: The logic of the 26S proteasome
  publication-title: Cell
  doi: 10.1016/j.cell.2017.04.023
– volume: 37
  start-page: 371
  year: 2020
  ident: 10.1016/j.molmed.2024.05.005_bb0080
  article-title: Proteome instability is a therapeutic vulnerability in mismatch repair-deficient cancer
  publication-title: Cancer Cell
  doi: 10.1016/j.ccell.2020.01.011
– volume: 87
  start-page: 697
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0195
  article-title: Structure and function of the 26S proteasome
  publication-title: Annu. Rev. Biochem.
  doi: 10.1146/annurev-biochem-062917-011931
– volume: 114
  start-page: 1058
  year: 2004
  ident: 10.1016/j.molmed.2024.05.005_bb0350
  article-title: Atrogin-1/muscle atrophy F-box inhibits calcineurin-dependent cardiac hypertrophy by participating in an SCF ubiquitin ligase complex
  publication-title: J. Clin. Invest.
  doi: 10.1172/JCI200422220
– volume: 21
  start-page: 2514
  year: 2012
  ident: 10.1016/j.molmed.2024.05.005_bb0445
  article-title: Regulation of parkin and PINK1 by neddylation
  publication-title: Hum. Mol. Genet.
  doi: 10.1093/hmg/dds070
– volume: 91
  year: 2017
  ident: 10.1016/j.molmed.2024.05.005_bb0275
  article-title: HDM2 promotes NEDDylation of hepatitis B virus HBx to enhance its stability and function
  publication-title: J. Virol.
  doi: 10.1128/JVI.00340-17
– volume: 13
  start-page: 2200
  year: 2014
  ident: 10.1016/j.molmed.2024.05.005_bb0145
  article-title: Isg15 controls p53 stability and functions
  publication-title: Cell Cycle
  doi: 10.4161/cc.29209
– volume: 38
  start-page: 722
  year: 2010
  ident: 10.1016/j.molmed.2024.05.005_bb0160
  article-title: The ISG15 conjugation system broadly targets newly synthesized proteins: implications for the antiviral function of ISG15
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2010.05.002
– volume: 117
  start-page: 2486
  year: 2007
  ident: 10.1016/j.molmed.2024.05.005_bb0355
  article-title: Myosin accumulation and striated muscle myopathy result from the loss of muscle RING finger 1 and 3
  publication-title: J. Clin. Invest.
  doi: 10.1172/JCI32827
– volume: 146
  year: 2019
  ident: 10.1016/j.molmed.2024.05.005_bb0020
  article-title: Novel functions of the ubiquitin-independent proteasome system in regulating Xenopus germline development
  publication-title: Development
– volume: 67
  start-page: 53
  year: 2010
  ident: 10.1016/j.molmed.2024.05.005_bb0390
  article-title: Interferon-stimulated gene 15 (ISG15) conjugates proteins in dermatomyositis muscle with perifascicular atrophy
  publication-title: Ann. Neurol.
  doi: 10.1002/ana.21805
– volume: 23
  start-page: 715
  year: 2022
  ident: 10.1016/j.molmed.2024.05.005_bb0130
  article-title: Signalling mechanisms and cellular functions of SUMO
  publication-title: Nat. Rev. Mol. Cell Biol.
  doi: 10.1038/s41580-022-00500-y
– volume: 13
  start-page: 3122
  year: 2022
  ident: 10.1016/j.molmed.2024.05.005_bb0305
  article-title: Pyruvate dehydrogenase kinase 4 promotes ubiquitin-proteasome system-dependent muscle atrophy
  publication-title: J. Cachexia. Sarcopenia Muscle
  doi: 10.1002/jcsm.13100
– volume: 38
  year: 2022
  ident: 10.1016/j.molmed.2024.05.005_bb0075
  article-title: Neddylation is essential for β-catenin degradation in Wnt signaling pathway
  publication-title: Cell Rep.
  doi: 10.1016/j.celrep.2022.110538
– volume: 114
  start-page: 13176
  year: 2017
  ident: 10.1016/j.molmed.2024.05.005_bb0270
  article-title: SUMOylation and ubiquitination reciprocally regulate α-synuclein degradation and pathological aggregation
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  doi: 10.1073/pnas.1704351114
– volume: 18
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0120
  article-title: The ubiquitin-like modifier FAT10 covalently modifies HUWE1 and strengthens the interaction of AMBRA1 and HUWE1
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0290002
– volume: 278
  start-page: 32905
  year: 2003
  ident: 10.1016/j.molmed.2024.05.005_bb0055
  article-title: Regulation of the NEDD8 conjugation system by a splicing variant, NUB1L
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M212057200
– volume: 211
  year: 2020
  ident: 10.1016/j.molmed.2024.05.005_bb0185
  article-title: Exploring the proteasome system: A novel concept of proteasome inhibition and regulation
  publication-title: Pharmacol. Ther.
  doi: 10.1016/j.pharmthera.2020.107526
– volume: 272
  start-page: 28557
  year: 1997
  ident: 10.1016/j.molmed.2024.05.005_bb0375
  article-title: Characterization of NEDD8, a developmentally down-regulated ubiquitin-like protein
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.272.45.28557
– volume: 34
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0115
  article-title: Parkin is an E3 ligase for the ubiquitin-like modifier FAT10, which inhibits Parkin activation and mitophagy
  publication-title: Cell Rep.
  doi: 10.1016/j.celrep.2021.108857
– volume: 1
  start-page: 13
  year: 2010
  ident: 10.1016/j.molmed.2024.05.005_bb0095
  article-title: USE1 is a bispecific conjugating enzyme for ubiquitin and FAT10, which FAT10ylates itself in cis
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms1012
– volume: 7
  start-page: 1062
  year: 2000
  ident: 10.1016/j.molmed.2024.05.005_bb0040
  article-title: A gated channel into the proteasome core particle
  publication-title: Nat. Struct. Biol.
  doi: 10.1038/80992
– volume: 288
  start-page: 31339
  year: 2013
  ident: 10.1016/j.molmed.2024.05.005_bb0215
  article-title: NEDD8 ultimate buster-1 long (NUB1L) protein promotes transfer of NEDD8 to proteasome for degradation through the P97UFD1/NPL4 complex
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M113.484816
– volume: 276
  start-page: 20603
  year: 2001
  ident: 10.1016/j.molmed.2024.05.005_bb0050
  article-title: NUB1, a NEDD8-interacting protein, is induced by interferon and down-regulates the NEDD8 expression
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M100920200
– volume: 290
  start-page: 23850
  year: 2015
  ident: 10.1016/j.molmed.2024.05.005_bb0280
  article-title: NEDD8 Ultimate buster 1 long (NUB1L) protein suppresses atypical neddylation and promotes the proteasomal degradation of misfolded proteins
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M115.664375
– volume: 199
  start-page: 259
  year: 2003
  ident: 10.1016/j.molmed.2024.05.005_bb0430
  article-title: NEDD8 protein is involved in ubiquitinated inclusion bodies
  publication-title: J. Pathol.
  doi: 10.1002/path.1283
– volume: 9
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0135
  article-title: SUMOylation-mediated PSME3-20S proteasomal degradation of transcription factor CP2c is crucial for cell cycle progression
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.add4969
– volume: 9
  start-page: 97
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0475
  article-title: Covalent ISG15 conjugation to CHIP promotes its ubiquitin E3 ligase activity and inhibits lung cancer cell growth in response to type I interferon
  publication-title: Cell Death Dis.
  doi: 10.1038/s41419-017-0138-9
– volume: 45
  start-page: 1309
  year: 2013
  ident: 10.1016/j.molmed.2024.05.005_bb0365
  article-title: BMP signaling controls muscle mass
  publication-title: Nat. Genet.
  doi: 10.1038/ng.2772
– volume: 17
  start-page: 1333
  year: 2015
  ident: 10.1016/j.molmed.2024.05.005_bb0505
  article-title: Suppression of glioblastoma by targeting the overactivated protein neddylation pathway
  publication-title: Neuro-Oncology
  doi: 10.1093/neuonc/nov066
– volume: 23
  start-page: 4307
  year: 2004
  ident: 10.1016/j.molmed.2024.05.005_bb0425
  article-title: Inefficient degradation of truncated polyglutamine proteins by the proteasome
  publication-title: EMBO J.
  doi: 10.1038/sj.emboj.7600426
– volume: 83
  start-page: 1921
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0025
  article-title: Ubiquitin-independent proteasomal degradation driven by C-degron pathways
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2023.04.023
– volume: 169
  start-page: 553
  year: 2006
  ident: 10.1016/j.molmed.2024.05.005_bb0440
  article-title: NUB1 suppresses the formation of Lewy body-like inclusions by proteasomal degradation of synphilin-1
  publication-title: Am. J. Pathol.
  doi: 10.2353/ajpath.2006.051067
– volume: 9
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0460
  article-title: Targeting the NEDP1 enzyme to ameliorate ALS phenotypes through stress granule disassembly
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.abq7585
– volume: 10
  year: 2015
  ident: 10.1016/j.molmed.2024.05.005_bb0235
  article-title: Conjugation of the ubiquitin activating enzyme UBE1 with the ubiquitin-like modifier FAT10 targets it for proteasomal degradation
  publication-title: PLoS One
  doi: 10.1371/journal.pone.0120329
– volume: 366
  start-page: 976
  year: 2008
  ident: 10.1016/j.molmed.2024.05.005_bb0455
  article-title: Inhibition of APP intracellular domain (AICD) transcriptional activity via covalent conjugation with Nedd8
  publication-title: Biochem. Biophys. Res. Commun.
  doi: 10.1016/j.bbrc.2007.12.066
– volume: 279
  start-page: 16503
  year: 2004
  ident: 10.1016/j.molmed.2024.05.005_bb0200
  article-title: NEDD8 ultimate buster-1L interacts with the ubiquitin-like protein FAT10 and accelerates its degradation
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M310114200
– volume: 9
  start-page: 1097
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0420
  article-title: A common mechanism of proteasome impairment by neurodegenerative disease-associated oligomers
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-03509-0
– volume: 286
  start-page: 29594
  year: 2011
  ident: 10.1016/j.molmed.2024.05.005_bb0470
  article-title: FAT10 protein binds to polyglutamine proteins and modulates their solubility
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M111.261032
– volume: 124
  start-page: 3529
  year: 2014
  ident: 10.1016/j.molmed.2024.05.005_bb0345
  article-title: KLHL40 deficiency destabilizes thin filament proteins and promotes nemaline myopathy
  publication-title: J. Clin. Invest.
  doi: 10.1172/JCI74994
– volume: 27
  year: 2019
  ident: 10.1016/j.molmed.2024.05.005_bb0395
  article-title: Regulation of SETD7 Methyltransferase by SENP3 Is Crucial for Sarcomere Organization and Cachexia
  publication-title: Cell Rep.
  doi: 10.1016/j.celrep.2019.04.107
– volume: 21
  start-page: 181
  year: 2022
  ident: 10.1016/j.molmed.2024.05.005_bb0490
  article-title: PROTAC targeted protein degraders: the past is prologue
  publication-title: Nat. Rev. Drug Discov.
  doi: 10.1038/s41573-021-00371-6
– volume: 6
  start-page: 376
  year: 2007
  ident: 10.1016/j.molmed.2024.05.005_bb0315
  article-title: The E3 Ligase MuRF1 degrades myosin heavy chain protein in dexamethasone-treated skeletal muscle
  publication-title: Cell Metab.
  doi: 10.1016/j.cmet.2007.09.009
– volume: 6
  start-page: 970
  year: 2020
  ident: 10.1016/j.molmed.2024.05.005_bb0010
  article-title: Degradation of SERRATE via ubiquitin-independent 20S proteasome to survey RNA metabolism
  publication-title: Nat. Plants
  doi: 10.1038/s41477-020-0721-4
– volume: 83
  start-page: 2367
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0300
  article-title: An Epstein-Barr virus protein interaction map reveals NLRP3 inflammasome evasion via MAVS UFMylation
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2023.05.018
– volume: 280
  start-page: 2847
  year: 2005
  ident: 10.1016/j.molmed.2024.05.005_bb0310
  article-title: Degradation of MyoD mediated by the SCF (MAFbx) ubiquitin ligase
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M411346200
– volume: 16
  start-page: 423
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0140
  article-title: ISG15 in antiviral immunity and beyond
  publication-title: Nat. Rev. Microbiol.
  doi: 10.1038/s41579-018-0020-5
– volume: 9
  start-page: 129
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0335
  article-title: A muscle-specific MuRF1-E2 network requires stabilization of MuRF1-E2 complexes by telethonin, a newly identified substrate
  publication-title: J. Cachexia. Sarcopenia Muscle
  doi: 10.1002/jcsm.12249
– volume: 15
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0340
  article-title: Desmosomal protein degradation as an underlying cause of arrhythmogenic cardiomyopathy
  publication-title: Sci. Transl. Med.
  doi: 10.1126/scitranslmed.add4248
– volume: 16
  start-page: 562
  year: 2013
  ident: 10.1016/j.molmed.2024.05.005_bb0465
  article-title: Identification of NUB1 as a suppressor of mutant Huntington toxicity via enhanced protein clearance
  publication-title: Nat. Neurosci.
  doi: 10.1038/nn.3367
– volume: 23
  start-page: 620
  year: 2013
  ident: 10.1016/j.molmed.2024.05.005_bb0230
  article-title: Def defines a conserved nucleolar pathway that leads p53 to proteasome-independent degradation
  publication-title: Cell Res.
  doi: 10.1038/cr.2013.16
– volume: 180
  start-page: 1160
  year: 2020
  ident: 10.1016/j.molmed.2024.05.005_bb0290
  article-title: A genome-wide ER-phagy screen highlights key roles of mitochondrial metabolism and ER-resident UFMylation
  publication-title: Cell
  doi: 10.1016/j.cell.2020.02.017
– volume: 22
  start-page: 1056
  year: 2020
  ident: 10.1016/j.molmed.2024.05.005_bb0285
  article-title: UFMylation maintains tumour suppressor p53 stability by antagonizing its ubiquitination
  publication-title: Nat. Cell Biol.
  doi: 10.1038/s41556-020-0559-z
– volume: 275
  start-page: 7462
  year: 2000
  ident: 10.1016/j.molmed.2024.05.005_bb0165
  article-title: A protein conjugation system in yeast with homology to biosynthetic enzyme reaction of prokaryotes
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.275.11.7462
– volume: 281
  start-page: 9919
  year: 2006
  ident: 10.1016/j.molmed.2024.05.005_bb0450
  article-title: Small ubiquitin-like modifier (SUMO) modification of natively unfolded proteins tau and alpha-synuclein
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M510127200
– volume: 12
  start-page: 5040
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0405
  article-title: Sumoylation regulates the assembly and activity of the SMN complex
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-021-25272-5
– volume: 13
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0485
  article-title: A small-molecule SUMOylation inhibitor activates antitumor immune responses and potentiates immune therapies in preclinical models
  publication-title: Sci. Transl. Med.
  doi: 10.1126/scitranslmed.aba7791
– volume: 184
  start-page: 5201
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0015
  article-title: Parasitic modulation of host development by ubiquitin-independent protein degradation
  publication-title: Cell
  doi: 10.1016/j.cell.2021.08.029
– volume: 6
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0205
  article-title: FAT10 and NUB1L cooperate to activate the 26S proteasome
  publication-title: Life Sci. Alliance
  doi: 10.26508/lsa.202201463
– volume: 13
  start-page: 84
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0155
  article-title: ISG15 suppresses ovulation and female fertility by ISGylating ADAMTS1
  publication-title: Cell Biosci.
  doi: 10.1186/s13578-023-01024-4
– volume: 99
  start-page: 3099
  year: 2002
  ident: 10.1016/j.molmed.2024.05.005_bb0520
  article-title: NQO1 stabilizes p53 through a distinct pathway
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  doi: 10.1073/pnas.052706799
– volume: 25
  start-page: 3483
  year: 2005
  ident: 10.1016/j.molmed.2024.05.005_bb0085
  article-title: FAT10, a ubiquitin-independent signal for proteasomal degradation
  publication-title: Mol. Cell. Biol.
  doi: 10.1128/MCB.25.9.3483-3491.2005
– volume: 294
  start-page: 4315
  year: 2019
  ident: 10.1016/j.molmed.2024.05.005_bb0240
  article-title: The ubiquitin-like modifier FAT10 stimulates the activity of deubiquitylating enzyme OTUB1
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.RA118.005406
– volume: 6
  start-page: 8163
  year: 2015
  ident: 10.1016/j.molmed.2024.05.005_bb0175
  article-title: Involvement of a eukaryotic-like ubiquitin-related modifier in the proteasome pathway of the archaeon Sulfolobus acidocaldarius
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms9163
– volume: 10
  start-page: 3678
  year: 2019
  ident: 10.1016/j.molmed.2024.05.005_bb0255
  article-title: Arkadia/RNF111 is a SUMO-targeted ubiquitin ligase with preference for substrates marked with SUMO1-capped SUMO2/3 chain
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-019-11549-3
– volume: 31
  start-page: 53
  year: 2005
  ident: 10.1016/j.molmed.2024.05.005_bb0435
  article-title: Accumulation of NEDD8 in neuronal and glial inclusions of neurodegenerative disorders
  publication-title: Neuropathol. Appl. Neurobiol.
  doi: 10.1111/j.1365-2990.2004.00603.x
– volume: 129
  start-page: 4477
  year: 2019
  ident: 10.1016/j.molmed.2024.05.005_bb0065
  article-title: Degradation of splicing factor SRSF3 contributes to progressive liver disease
  publication-title: J. Clin. Invest.
  doi: 10.1172/JCI127374
– volume: 3
  start-page: 749
  year: 2012
  ident: 10.1016/j.molmed.2024.05.005_bb0105
  article-title: FAT10 and NUB1L bind to the VWA domain of Rpn10 and Rpn1 to enable proteasome-mediated proteolysis
  publication-title: Nat. Commun.
  doi: 10.1038/ncomms1752
– volume: 69
  start-page: 182
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0210
  article-title: VCP/p97-mediated unfolding as a principle in protein homeostasis and signaling
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2017.10.028
– volume: 111
  start-page: 16586
  year: 2014
  ident: 10.1016/j.molmed.2024.05.005_bb0260
  article-title: SUMOylation at K340 inhibits tau degradation through deregulating its phosphorylation and ubiquitination
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  doi: 10.1073/pnas.1417548111
– volume: 281
  start-page: 1848
  year: 2014
  ident: 10.1016/j.molmed.2024.05.005_bb0100
  article-title: Investigations into the auto-FAT10ylation of the bispecific E2 conjugating enzyme UBA6-specific E2 enzyme 1
  publication-title: FEBS J.
  doi: 10.1111/febs.12745
– volume: 185
  start-page: 1083
  year: 2009
  ident: 10.1016/j.molmed.2024.05.005_bb0320
  article-title: During muscle atrophy, thick, but not thin, filament components are degraded by MuRF1-dependent ubiquitylation
  publication-title: J. Cell Biol.
  doi: 10.1083/jcb.200901052
– volume: 9
  start-page: 3321
  year: 2018
  ident: 10.1016/j.molmed.2024.05.005_bb0090
  article-title: The structure of the ubiquitin-like modifier FAT10 reveals an alternative targeting mechanism for proteasomal degradation
  publication-title: Nat. Commun.
  doi: 10.1038/s41467-018-05776-3
– volume: 18
  start-page: 1484
  year: 2017
  ident: 10.1016/j.molmed.2024.05.005_bb0410
  article-title: Single-cell analysis of SMN reveals its broader role in neuromuscular disease
  publication-title: Cell Rep.
  doi: 10.1016/j.celrep.2017.01.035
– volume: 1843
  start-page: 216
  year: 2014
  ident: 10.1016/j.molmed.2024.05.005_bb0005
  article-title: Ubiquitin-independent proteasomal degradation
  publication-title: Biochim. Biophys. Acta
  doi: 10.1016/j.bbamcr.2013.05.008
– volume: 25
  start-page: 3790
  year: 2011
  ident: 10.1016/j.molmed.2024.05.005_bb0325
  article-title: Muscle actin is polyubiquitinylated in vitro and in vivo and targeted for breakdown by the E3 ligase MuRF1
  publication-title: FASEB J.
  doi: 10.1096/fj.11-180968
– volume: 276
  start-page: 46655
  year: 2001
  ident: 10.1016/j.molmed.2024.05.005_bb0060
  article-title: Targeting of NEDD8 and its conjugates for proteasomal degradation by NUB1
  publication-title: J. Biol. Chem.
  doi: 10.1074/jbc.M108636200
– volume: 41
  start-page: 8
  year: 2011
  ident: 10.1016/j.molmed.2024.05.005_bb0180
  article-title: Proteasome activators
  publication-title: Mol. Cell
  doi: 10.1016/j.molcel.2010.12.020
– volume: 120
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0035
  article-title: Homeostatic regulation of ribosomal proteins by ubiquitin-independent cotranslational degradation
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  doi: 10.1073/pnas.2306152120
– volume: 463
  start-page: 54
  year: 2010
  ident: 10.1016/j.molmed.2024.05.005_bb0170
  article-title: Ubiquitin-like small archaeal modifier proteins (SAMPs) in Haloferax volcanii
  publication-title: Nature
  doi: 10.1038/nature08659
– volume: 46
  start-page: 258
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0045
  article-title: Chromatin Regulation through Ubiquitin and Ubiquitin-like Histone Modifications
  publication-title: Trends Biochem. Sci.
  doi: 10.1016/j.tibs.2020.11.005
– volume: 125
  start-page: 4576
  year: 2012
  ident: 10.1016/j.molmed.2024.05.005_bb0110
  article-title: The proteomic analysis of endogenous FAT10 substrates identifies p62/SQSTM1 as a substrate of FAT10ylation
  publication-title: J. Cell Sci.
– volume: 11
  start-page: 356
  year: 2019
  ident: 10.1016/j.molmed.2024.05.005_bb0400
  article-title: Muscle RING-finger protein-1 (MuRF1) functions and cellular localization are regulated by SUMO1 post-translational modification
  publication-title: J. Mol. Cell Biol.
  doi: 10.1093/jmcb/mjy036
– volume: 9
  year: 2023
  ident: 10.1016/j.molmed.2024.05.005_bb0295
  article-title: Mechanistic insights into the roles of the UFM1 E3 ligase complex in ufmylation and ribosome-associated protein quality control
  publication-title: Sci. Adv.
  doi: 10.1126/sciadv.adh3635
– volume: 101
  start-page: 18135
  year: 2004
  ident: 10.1016/j.molmed.2024.05.005_bb0360
  article-title: Muscle-specific RING finger 1 is a bona fide ubiquitin ligase that degrades cardiac troponin I
  publication-title: Proc. Natl. Acad. Sci. U. S. A.
  doi: 10.1073/pnas.0404341102
– volume: 14
  start-page: 1069
  year: 2021
  ident: 10.1016/j.molmed.2024.05.005_bb0480
  article-title: Asia-inclusive global development of pevonedistat: Clinical pharmacology and translational research enabling a phase 3 multiregional clinical trial
  publication-title: Clin. Transl. Sci.
  doi: 10.1111/cts.12972
– volume: 45
  start-page: 555
  year: 2016
  ident: 10.1016/j.molmed.2024.05.005_bb0265
  article-title: Sumoylation promotes the stability of the DNA sensor cGAS and the adaptor STING to regulate the kinetics of response to DNA virus
  publication-title: Immunity
  doi: 10.1016/j.immuni.2016.08.014
SSID ssj0015778
Score 2.5038795
SecondaryResourceType review_article
Snippet Many proteins have been identified subject to ubiquitin (Ub)-independent proteasome degradation (UbIPD), a process mediated by Ub-like (UBL)...
Although it is believed that ubiquitin (Ub) modification is required for protein degradation in the proteasome system (UPS), several proteins are subject to...
SourceID proquest
pubmed
crossref
elsevier
SourceType Aggregation Database
Index Database
Enrichment Source
Publisher
StartPage 1061
SubjectTerms Animals
Humans
muscle wasting diseases
neurodegenerative diseases
Neurodegenerative Diseases - drug therapy
Neurodegenerative Diseases - metabolism
proteasomal degradation
Proteasome Endopeptidase Complex - metabolism
proteasome regulators
Protein Processing, Post-Translational
Proteolysis - drug effects
ubiquitin-like modification
ubiquitin-like proteasome system
Ubiquitination - drug effects
Ubiquitins - metabolism
Title Ubiquitin-like modification dependent proteasomal degradation and disease therapy
URI https://www.clinicalkey.com/#!/content/1-s2.0-S1471491424001278
https://dx.doi.org/10.1016/j.molmed.2024.05.005
https://www.ncbi.nlm.nih.gov/pubmed/38851992
https://www.proquest.com/docview/3065982346
Volume 30
WOSCitedRecordID wos001357304900001&url=https%3A%2F%2Fcvtisr.summon.serialssolutions.com%2F%23%21%2Fsearch%3Fho%3Df%26include.ft.matches%3Dt%26l%3Dnull%26q%3D
hasFullText 1
inHoldings 1
isFullTextHit
isPrint
journalDatabaseRights – providerCode: PRVESC
  databaseName: Elsevier SD Freedom Collection Journals 2021
  customDbUrl:
  eissn: 1471-499X
  dateEnd: 99991231
  omitProxy: false
  ssIdentifier: ssj0015778
  issn: 1471-4914
  databaseCode: AIEXJ
  dateStart: 20010101
  isFulltext: true
  titleUrlDefault: https://www.sciencedirect.com
  providerName: Elsevier
link http://cvtisr.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1bb9MwFLZYB9NeJhi3sjEFibcpKPEldh4nNMQqmEDqRN6sxLWnlDUta4rGv8fXLGxUGw-8RJUvqerv6_Gxzw2At4IkMBdMxjKDKsZU4LiCEsVYJIJCUhIsbMr8T_T0lBVF_sVb8Je2nABtGnZ1lS_-K9S6TYNtQmf_Ae7upbpBf9ag66eGXT_vBfxZVf9Y1W3dxBf1d2lK3RhvIIdzKHnbHtr8DOVyPjNGGpMwwtVWsrYEb7Q5bHsZB6btDRfaWaire8s8_81fQY8189oe-0a17xjV3djuvrpYyWvZbxuMm9N5_1ICYh-dZ_cUJ0j1phfr01TRl7TeAuMZlfbkpjmY_lWgu7uF6buZCdAwmV0htplWbax224NzMbN4IqZVyNyV17uRSDt0bYBNSEnOBmDz6OS4GHVGJ0IpC9GV1gXw9pdug63wmnWKzLqDilVYxo_Bjj9pREeOIU_AA9nsgkeu9uivXbD12cP2FHz9kzJRnzJRR5moR5moR5lIUybylIk8ZZ6Bsw_H4_cfY19qIxZag2tjjHM1oSa3IVKizNMJlLialHlFVIJUJSmhqVKMKpwoQfQIIUukcpWVKklFhtBzMGjmjXwJIpFJKqESk4wgLDPMypTIKpepJKjCkA4BCuvGhc9Db8qhXPDgcDjlbuG5WXieEK4XfgjibtbC5WG5YzwJkPAQY6x3Ra55dcc82s3zOqjTLe8x801AnmsRbexuZSPnqyVHxneBQYSzIXjhKNH9hsCmV2t79sD29T9sHwzay5V8DR6Kn229vDwAG7RgB57JvwGEdbqY
linkProvider Elsevier
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Ubiquitin-like+modification+dependent+proteasomal+degradation+and+disease+therapy&rft.jtitle=Trends+in+molecular+medicine&rft.au=Wang%2C+Tiantian&rft.au=Jiang%2C+Jie&rft.au=Zhang%2C+Xue&rft.au=Ke%2C+Xisong&rft.date=2024-11-01&rft.eissn=1471-499X&rft.volume=30&rft.issue=11&rft.spage=1061&rft_id=info:doi/10.1016%2Fj.molmed.2024.05.005&rft_id=info%3Apmid%2F38851992&rft.externalDocID=38851992
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1471-4914&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1471-4914&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1471-4914&client=summon