GTDB-Tk v2: memory friendly classification with the genome taxonomy database

The Genome Taxonomy Database (GTDB) and associated taxonomic classification toolkit (GTDB-Tk) have been widely adopted by the microbiology community. However, the growing size of the GTDB bacterial reference tree has resulted in GTDB-Tk requiring substantial amounts of memory (∼320 GB) which limits...

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Bibliographic Details

Published in:	Bioinformatics (Oxford, England) Vol. 38; no. 23; pp. 5315 - 5316
Main Authors:	Chaumeil, Pierre-Alain, Mussig, Aaron J, Hugenholtz, Philip, Parks, Donovan H
Format:	Journal Article
Language:	English
Published:	England Oxford University Press 30.11.2022
Subjects:	Applications Note Documentation Software
ISSN:	1367-4803, 1367-4811, 1367-4811
Online Access:	Get full text
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