Earth Biogenome Project: present status and future plans

Earth Biogenome Project (EBP) is an ambitious project targeted to provide high-quality reference genome sequences for all 1.8 million named extant (living) eukaryote species. The project was launched on 1 November 2018 with an initial 2 years’ pilot phase (2018–2020) followed by Phase I (2020–2023),...

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Published in:	Trends in genetics Vol. 38; no. 8; pp. 811 - 820
Main Author:	Gupta, Pushpendra Kumar
Format:	Journal Article
Language:	English
Published:	England Elsevier Ltd 01.08.2022
Subjects:	biodiversity DNA sequencing genome network of networks genome network of networks biodiversity DNA sequencing
ISSN:	0168-9525
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Abstract	Earth Biogenome Project (EBP) is an ambitious project targeted to provide high-quality reference genome sequences for all 1.8 million named extant (living) eukaryote species. The project was launched on 1 November 2018 with an initial 2 years’ pilot phase (2018–2020) followed by Phase I (2020–2023), during which genomes of 9400 species will be sequenced. The genomes of the remaining ~1.7 million species will be sequenced in a planned manner during Phase II (2024–2027) and Phase III (2028–2030). In view of the excitement generated and the progress already made, the subject was covered in a Special Feature of a recent issue of PNAS (25 January 2022). The present status and future plans of EBP along with challenges faced are briefly discussed in this article. Earth Biogenome Project (EBP) has a target of developing reference genomes of 1.8 million named species by the year 2030 in three phases. It is a network of ~50 networks.The project will make use of emerging next generation sequencing technologies, including both short and long reads.Different aspects of EBP have been covered in nine articles included in a Special Feature of Proceedings of the National Academy of Sciences (PNAS) (25 November 2022).The Office of EBP is located in the Genome Center of the University of California, Davis (UCD); HA Lewin is the Chair with John Kress and Gene Robinson as Co-Chairs. There are eight technical subcommittees to monitor progress of EBP.The output of EBP will facilitate development of methods for conservation, phylogeny and for maintenance of ecological systems.
AbstractList	Earth Biogenome Project (EBP) is an ambitious project targeted to provide high-quality reference genome sequences for all 1.8 million named extant (living) eukaryote species. The project was launched on 1 November 2018 with an initial 2 years' pilot phase (2018-2020) followed by Phase I (2020-2023), during which genomes of 9400 species will be sequenced. The genomes of the remaining ~1.7 million species will be sequenced in a planned manner during Phase II (2024-2027) and Phase III (2028-2030). In view of the excitement generated and the progress already made, the subject was covered in a Special Feature of a recent issue of PNAS (25 January 2022). The present status and future plans of EBP along with challenges faced are briefly discussed in this article.Earth Biogenome Project (EBP) is an ambitious project targeted to provide high-quality reference genome sequences for all 1.8 million named extant (living) eukaryote species. The project was launched on 1 November 2018 with an initial 2 years' pilot phase (2018-2020) followed by Phase I (2020-2023), during which genomes of 9400 species will be sequenced. The genomes of the remaining ~1.7 million species will be sequenced in a planned manner during Phase II (2024-2027) and Phase III (2028-2030). In view of the excitement generated and the progress already made, the subject was covered in a Special Feature of a recent issue of PNAS (25 January 2022). The present status and future plans of EBP along with challenges faced are briefly discussed in this article. Earth Biogenome Project (EBP) is an ambitious project targeted to provide high-quality reference genome sequences for all 1.8 million named extant (living) eukaryote species. The project was launched on 1 November 2018 with an initial 2 years’ pilot phase (2018–2020) followed by Phase I (2020–2023), during which genomes of 9400 species will be sequenced. The genomes of the remaining ~1.7 million species will be sequenced in a planned manner during Phase II (2024–2027) and Phase III (2028–2030). In view of the excitement generated and the progress already made, the subject was covered in a Special Feature of a recent issue of PNAS (25 January 2022). The present status and future plans of EBP along with challenges faced are briefly discussed in this article. Earth Biogenome Project (EBP) has a target of developing reference genomes of 1.8 million named species by the year 2030 in three phases. It is a network of ~50 networks.The project will make use of emerging next generation sequencing technologies, including both short and long reads.Different aspects of EBP have been covered in nine articles included in a Special Feature of Proceedings of the National Academy of Sciences (PNAS) (25 November 2022).The Office of EBP is located in the Genome Center of the University of California, Davis (UCD); HA Lewin is the Chair with John Kress and Gene Robinson as Co-Chairs. There are eight technical subcommittees to monitor progress of EBP.The output of EBP will facilitate development of methods for conservation, phylogeny and for maintenance of ecological systems. Earth Biogenome Project (EBP) is an ambitious project targeted to provide high-quality reference genome sequences for all 1.8 million named extant (living) eukaryote species. The project was launched on 1 November 2018 with an initial 2 years' pilot phase (2018-2020) followed by Phase I (2020-2023), during which genomes of 9400 species will be sequenced. The genomes of the remaining ~1.7 million species will be sequenced in a planned manner during Phase II (2024-2027) and Phase III (2028-2030). In view of the excitement generated and the progress already made, the subject was covered in a Special Feature of a recent issue of PNAS (25 January 2022). The present status and future plans of EBP along with challenges faced are briefly discussed in this article.
Author	Gupta, Pushpendra Kumar
Author_xml	– sequence: 1 givenname: Pushpendra Kumar surname: Gupta fullname: Gupta, Pushpendra Kumar email: pkgupta36@gmail.com organization: Department of Genetics and Plant Breeding, Ch. Charan Singh University, Meerut, India 250004, India
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