Evolutionary dynamics of Ceratonova species (Cnidaria: Myxozoa) reveal different host adaptation strategies

The myxozoan parasite Ceratonova shasta is an important pathogen that infects multiple species of Pacific salmonids. Ongoing genetic surveillance has revealed stable host-parasite relationships throughout the parasite's endemic range. We applied Bayesian phylogenetics to test specific hypothese...

Celý popis

Uloženo v:

Podrobná bibliografie
Vydáno v:	Infection, genetics and evolution Ročník 78; s. 104081
Hlavní autoři:	Breyta, Rachel, Atkinson, Stephen D., Bartholomew, Jerri L.
Médium:	Journal Article
Jazyk:	angličtina
Vydáno:	Netherlands Elsevier B.V 01.03.2020
Témata:	Adaptation, Physiological ancestry Animals basins Bayes Theorem Bayesian phylogenetics California Ceratomyxa shasta Ceratonova shasta Gasterosteus aculeatus Genotype Host Specificity Host-Parasite Interactions hosts infection ITS-1 Klamath River monitoring Myxozoa - classification Myxozoa - genetics Myxozoa - physiology Oncorhynchus kisutch Oncorhynchus mykiss Oncorhynchus tshawytscha Oregon Pacific salmon parasites pathogens Phylogeny Rhinichthys osculus rivers rRNA Salmonidae - genetics Salmonidae - parasitology Sequence Analysis, DNA - methods watersheds Oregon California Ceratonova shasta ITS-1 Pacific salmon Bayesian phylogenetics Klamath River rRNA
ISSN:	1567-1348, 1567-7257, 1567-7257
On-line přístup:	Získat plný text
Tagy:	Přidat tag Žádné tagy, Buďte první, kdo vytvoří štítek k tomuto záznamu!

Abstract	The myxozoan parasite Ceratonova shasta is an important pathogen that infects multiple species of Pacific salmonids. Ongoing genetic surveillance has revealed stable host-parasite relationships throughout the parasite's endemic range. We applied Bayesian phylogenetics to test specific hypotheses about the evolution of these host-parasite relationships within the well-studied Klamath River watershed in Oregon and California, USA. The results provide statistical support that different genotypes of C. shasta are distinct lineages of one species, which is related to two other Ceratonova species in the same ecosystems; Ceratonova X in speckled dace and C. gasterostea in threespine stickleback. Furthermore, we found strong support for the hypothesis that C. shasta type 0 in native steelhead trout and type I in Chinook salmon each evolved with a specialist host adaptation strategy, while C. shasta type II in coho salmon resulted from a generalist host adaptation strategy. Inferred date and host species of the most recent common ancestor of extant Klamath basin types indicate that it occurred between 14,000 and 21,000 years ago, and most likely infected a native steelhead or rainbow trout host. •Field-observed differences are revealed to be two distinct evolutionary adaptation strategies that are supported by statistically significant population genetic analyses.•The most recent common ancestor of extant types occurred between 14,000–21,000 years ago, infecting a native steelhead or rainbow trout host.
AbstractList	The myxozoan parasite Ceratonova shasta is an important pathogen that infects multiple species of Pacific salmonids. Ongoing genetic surveillance has revealed stable host-parasite relationships throughout the parasite's endemic range. We applied Bayesian phylogenetics to test specific hypotheses about the evolution of these host-parasite relationships within the well-studied Klamath River watershed in Oregon and California, USA. The results provide statistical support that different genotypes of C. shasta are distinct lineages of one species, which is related to two other Ceratonova species in the same ecosystems; Ceratonova X in speckled dace and C. gasterostea in threespine stickleback. Furthermore, we found strong support for the hypothesis that C. shasta type 0 in native steelhead trout and type I in Chinook salmon each evolved with a specialist host adaptation strategy, while C. shasta type II in coho salmon resulted from a generalist host adaptation strategy. Inferred date and host species of the most recent common ancestor of extant Klamath basin types indicate that it occurred between 14,000 and 21,000 years ago, and most likely infected a native steelhead or rainbow trout host. The myxozoan parasite Ceratonova shasta is an important pathogen that infects multiple species of Pacific salmonids. Ongoing genetic surveillance has revealed stable host-parasite relationships throughout the parasite's endemic range. We applied Bayesian phylogenetics to test specific hypotheses about the evolution of these host-parasite relationships within the well-studied Klamath River watershed in Oregon and California, USA. The results provide statistical support that different genotypes of C. shasta are distinct lineages of one species, which is related to two other Ceratonova species in the same ecosystems; Ceratonova X in speckled dace and C. gasterostea in threespine stickleback. Furthermore, we found strong support for the hypothesis that C. shasta type 0 in native steelhead trout and type I in Chinook salmon each evolved with a specialist host adaptation strategy, while C. shasta type II in coho salmon resulted from a generalist host adaptation strategy. Inferred date and host species of the most recent common ancestor of extant Klamath basin types indicate that it occurred between 14,000 and 21,000 years ago, and most likely infected a native steelhead or rainbow trout host. •Field-observed differences are revealed to be two distinct evolutionary adaptation strategies that are supported by statistically significant population genetic analyses.•The most recent common ancestor of extant types occurred between 14,000–21,000 years ago, infecting a native steelhead or rainbow trout host. The myxozoan parasite Ceratonova shasta is an important pathogen that infects multiple species of Pacific salmonids. Ongoing genetic surveillance has revealed stable host-parasite relationships throughout the parasite's endemic range. We applied Bayesian phylogenetics to test specific hypotheses about the evolution of these host-parasite relationships within the well-studied Klamath River watershed in Oregon and California, USA. The results provide statistical support that different genotypes of C. shasta are distinct lineages of one species, which is related to two other Ceratonova species in the same ecosystems; Ceratonova X in speckled dace and C. gasterostea in threespine stickleback. Furthermore, we found strong support for the hypothesis that C. shasta type 0 in native steelhead trout and type I in Chinook salmon each evolved with a specialist host adaptation strategy, while C. shasta type II in coho salmon resulted from a generalist host adaptation strategy. Inferred date and host species of the most recent common ancestor of extant Klamath basin types indicate that it occurred between 14,000 and 21,000 years ago, and most likely infected a native steelhead or rainbow trout host.The myxozoan parasite Ceratonova shasta is an important pathogen that infects multiple species of Pacific salmonids. Ongoing genetic surveillance has revealed stable host-parasite relationships throughout the parasite's endemic range. We applied Bayesian phylogenetics to test specific hypotheses about the evolution of these host-parasite relationships within the well-studied Klamath River watershed in Oregon and California, USA. The results provide statistical support that different genotypes of C. shasta are distinct lineages of one species, which is related to two other Ceratonova species in the same ecosystems; Ceratonova X in speckled dace and C. gasterostea in threespine stickleback. Furthermore, we found strong support for the hypothesis that C. shasta type 0 in native steelhead trout and type I in Chinook salmon each evolved with a specialist host adaptation strategy, while C. shasta type II in coho salmon resulted from a generalist host adaptation strategy. Inferred date and host species of the most recent common ancestor of extant Klamath basin types indicate that it occurred between 14,000 and 21,000 years ago, and most likely infected a native steelhead or rainbow trout host.
ArticleNumber	104081
Author	Breyta, Rachel Bartholomew, Jerri L. Atkinson, Stephen D.
Author_xml	– sequence: 1 givenname: Rachel surname: Breyta fullname: Breyta, Rachel email: rbjmax@uw.edu organization: Department of Microbiology, Oregon State University, Corvallis, OR, USA – sequence: 2 givenname: Stephen D. surname: Atkinson fullname: Atkinson, Stephen D. organization: Department of Microbiology, Oregon State University, Corvallis, OR, USA – sequence: 3 givenname: Jerri L. surname: Bartholomew fullname: Bartholomew, Jerri L. organization: Department of Microbiology, Oregon State University, Corvallis, OR, USA
BackLink	https://www.ncbi.nlm.nih.gov/pubmed/31676446$$D View this record in MEDLINE/PubMed
BookMark	eNqFkU9v1DAQxS1URP9-A4R8bA-7xHbsJD0goVVpkYq4wNma2GPwksSL7V2x_fR4le2FAz15ZL33NPN75-RkChMS8pZVS1Yx9X69HBF_eLvkFevKV1217BU5Y1I1i4bL5uQ4M1G3p-Q8pXVVsabi7RtyKphqVF2rM_LrbheGbfZhgrindj_B6E2iwdEVRshhCjugaYPGY6LXq8lbiB5u6Zf9n_AU4IZG3CEM1HrnMOKU6c-QMgULmwyHWJpyySmLYrokrx0MCa-O7wX5_unu2-ph8fj1_vPq4-PCiE7mBdbKOqksNK1AkB2qtpGuNbbq-qYF19bWOid5b2wNYHtU0EshAMu5ViopLsj1nLuJ4fcWU9ajTwaHASYM26S5lKyTnHfsZalgTEnOBC_Sd0fpth_R6k30Y2Gmn1kWwe0sMDGkFNFp42cGhYAfNKv0oTi91nNx-lCcnosr5vof83P-C7YPsw0Lz53HqFNpajJofUSTtQ3-_wF_ATBhtcM
CitedBy_id	crossref_primary_10_3389_fcimb_2021_804864 crossref_primary_10_1099_ijsem_0_005662 crossref_primary_10_7717_peerj_13183 crossref_primary_10_1017_S0031182022001275
Cites_doi	10.1038/nmeth.2109 10.1645/18-79 10.1534/g3.116.038497 10.3354/dao02092 10.1128/AEM.07801-11 10.1016/j.gene.2014.05.065 10.1111/j.1752-4571.2008.00023.x 10.2307/3284281 10.1007/978-1-60327-429-6_1 10.1016/j.tree.2013.09.004 10.1093/molbev/msi103 10.1016/j.meegid.2010.06.013 10.1111/mec.14558 10.1007/BF02101694 10.1111/j.1365-2761.2012.01407.x 10.1089/fpd.2012.1294 10.1261/rna.2144205 10.1093/oxfordjournals.molbev.a003872 10.1080/02755947.2012.655843 10.1080/08997659.2014.970716 10.1093/bioinformatics/bti320 10.1093/molbev/mss075 10.1016/j.ympev.2015.03.004 10.1645/13-434.1 10.1016/0304-4149(82)90011-4 10.1038/s41598-018-29046-w 10.1371/journal.pone.0091928 10.7883/yoken.JJID.2014.027 10.1017/S0031182018000422 10.1128/JCM.00680-08 10.1016/j.tig.2015.01.002 10.1016/j.ijpara.2009.10.010 10.1186/1471-2148-7-214 10.1534/genetics.104.026666 10.1093/nar/gku283 10.1645/13-482.1
ContentType	Journal Article
Copyright	2019 Elsevier B.V. Copyright © 2019 Elsevier B.V. All rights reserved.
Copyright_xml	– notice: 2019 Elsevier B.V. – notice: Copyright © 2019 Elsevier B.V. All rights reserved.
DBID	AAYXX CITATION CGR CUY CVF ECM EIF NPM 7X8 7S9 L.6
DOI	10.1016/j.meegid.2019.104081
DatabaseName	CrossRef Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed MEDLINE - Academic AGRICOLA AGRICOLA - Academic
DatabaseTitle	CrossRef MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) MEDLINE - Academic AGRICOLA AGRICOLA - Academic
DatabaseTitleList	AGRICOLA MEDLINE MEDLINE - Academic
Database_xml	– sequence: 1 dbid: NPM name: PubMed url: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: 7X8 name: MEDLINE - Academic url: https://search.proquest.com/medline sourceTypes: Aggregation Database
DeliveryMethod	fulltext_linktorsrc
Discipline	Public Health
EISSN	1567-7257
ExternalDocumentID	31676446 10_1016_j_meegid_2019_104081 S1567134819303077
Genre	Research Support, U.S. Gov't, Non-P.H.S Journal Article
GeographicLocations	Oregon California
GeographicLocations_xml	– name: California – name: Oregon
GroupedDBID	--- --K --M .~1 0R~ 1B1 1RT 1~. 1~5 29I 4.4 457 4G. 53G 5GY 5VS 7-5 71M 8P~ AAAJQ AABVA AACTN AAEDT AAEDW AAFWJ AAIAV AAIKJ AAKOC AALCJ AALRI AAOAW AAQFI AAQXK AARKO AATLK AAXUO ABBQC ABFNM ABFRF ABGRD ABGSF ABLVK ABMAC ABMZM ABUDA ABXDB ABYKQ ACDAQ ACGFO ACGFS ACIUM ACRLP ADBBV ADEZE ADMUD ADQTV ADUVX AEBSH AEFWE AEHWI AEKER AENEX AEQOU AFKWA AFPKN AFTJW AFXIZ AGEKW AGHFR AGRDE AGUBO AGYEJ AIEXJ AIKHN AITUG AJBFU AJOXV AJRQY ALMA_UNASSIGNED_HOLDINGS AMFUW AMRAJ ANZVX ASPBG AVWKF AXJTR AZFZN BKOJK BLXMC BNPGV CBWCG CJTIS CS3 DOVZS DU5 EBS EFJIC EFLBG EJD EO8 EO9 EP2 EP3 F5P FDB FEDTE FGOYB FIRID FNPLU FYGXN G-Q GBLVA GROUPED_DOAJ HVGLF HZ~ IHE J1W KOM LCYCR LUGTX M41 MO0 N9A O-L O9- OAUVE OK1 OZT P-8 P-9 P2P PC. Q38 R2- RIG ROL RPZ SDF SDG SDP SES SEW SPCBC SSA SSH SSI SSU SSZ T5K UHS UNMZH ~G- 9DU AAHBH AATTM AAXKI AAYWO AAYXX ABWVN ACIEU ACLOT ACRPL ACVFH ADCNI ADNMO ADVLN AEIPS AEUPX AFJKZ AFPUW AGQPQ AIGII AIIUN AKBMS AKRWK AKYEP ANKPU APXCP CITATION EFKBS ~HD CGR CUY CVF ECM EIF NPM 7X8 7S9 L.6
ID	FETCH-LOGICAL-c395t-e46df56da783ea59e6875f8cd09b78af84ddff52bcd4aadbe6ab533ae156d5653
ISICitedReferencesCount	5
ISICitedReferencesURI	http://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=Summon&SrcAuth=ProQuest&DestLinkType=CitingArticles&DestApp=WOS_CPL&KeyUT=000510876600014&url=https%3A%2F%2Fcvtisr.summon.serialssolutions.com%2F%23%21%2Fsearch%3Fho%3Df%26include.ft.matches%3Dt%26l%3Dnull%26q%3D
ISSN	1567-1348 1567-7257
IngestDate	Mon Sep 29 06:10:11 EDT 2025 Wed Oct 01 13:33:56 EDT 2025 Wed Feb 19 02:30:34 EST 2025 Tue Nov 18 21:56:41 EST 2025 Sat Nov 29 07:01:50 EST 2025 Fri Feb 23 02:48:32 EST 2024
IsPeerReviewed	true
IsScholarly	true
Keywords	Ceratonova shasta ITS-1 Pacific salmon Bayesian phylogenetics Klamath River rRNA
Language	English
License	Copyright © 2019 Elsevier B.V. All rights reserved.
LinkModel	OpenURL
MergedId	FETCHMERGED-LOGICAL-c395t-e46df56da783ea59e6875f8cd09b78af84ddff52bcd4aadbe6ab533ae156d5653
Notes	ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23
PMID	31676446
PQID	2311652132
PQPubID	23479
ParticipantIDs	proquest_miscellaneous_2551952291 proquest_miscellaneous_2311652132 pubmed_primary_31676446 crossref_citationtrail_10_1016_j_meegid_2019_104081 crossref_primary_10_1016_j_meegid_2019_104081 elsevier_sciencedirect_doi_10_1016_j_meegid_2019_104081
PublicationCentury	2000
PublicationDate	March 2020 2020-03-00 20200301
PublicationDateYYYYMMDD	2020-03-01
PublicationDate_xml	– month: 03 year: 2020 text: March 2020
PublicationDecade	2020
PublicationPlace	Netherlands
PublicationPlace_xml	– name: Netherlands
PublicationTitle	Infection, genetics and evolution
PublicationTitleAlternate	Infect Genet Evol
PublicationYear	2020
Publisher	Elsevier B.V
Publisher_xml	– name: Elsevier B.V
References	Bjork, Bartholomew (bb0040) 2009; 86 Jukes, Cantor (bb0115) 1969; 3 Badotti (bb0025) 2018; 41 Bartholomew, Whipple, Stevens, Fryer (bb0035) 1997; 83 Hurst, Bartholomew (bb0100) 2015; 27 Hurst, Holt, Bartholomew (bb0105) 2012; 32 Suchard, Weiss, Sinsheimer (bb0180) 2001; 18 Drummond, Rambaut, Shapiro, Pybus (bb0060) May 2005; 22 Hurst, Wong, Hallett, Ray, Bartholomew (bb0110) 2014; 100 Mowna Sundari, Alwin Prem Anand, Jenifer, Shenbagarathai (bb0155) 2018; 8 Atkinson, Foott, Bartholomew (bb0015) 2014; 100 Drummond, Rambaut (bb0055) 2007; 7 Hudson, Boos, Kaplan (bb0090) 1992; 9 Drummond, Suchard, Xie, Rambaut (bb0065) 2012; 29 Pond, Frost (bb0170) 2005; 21 Wolf, Koetschan, Muller (bb0195) 2014; 546 Yahata, Sugita-Konishi, Ohnishi, Toyokawa, Nakamura, Taniguchi, Okabe (bb0200) 2015; 68 Atkinson, Bartholomew (bb0005) 2010; 40 Hallett, Ray, Hurst, Holt, Buckles, Atkinson, Bartholomew (bb0075) 2012; 78 Mattei, Ausiello, Ferre, Helmer-Citterich (bb0145) 2014; 42 Stinson, Atkinson, Bartholomew (bb0175) 2018; 104 Fiala, Hlavnickova, Kodadkova, Freeman, Bartosova-Sojkova, Atkinson (bb0070) 2015; 86 Atkinson, Bartholomew (bb0010) 2010; 10 Leitwein, Guinand, Pouzadoux, Desmarais, Berrebi, Gagnaire (bb0130) 2017; 7 Atkinson, Hallett, Bartholomew (bb0020) 2018; 145 Lemey, Pybus, Rambaut, Drummond, Robertson, Roques, Worobey, Vandamme (bb0135) 2004; 167 Wolf, Achtziger, Schultz, Dandekar, Muller (bb0190) 2005; 11 Hurst, Bartholomew (bb0095) 2012; 35 Kingman (bb0120) 1982; 13 Coleman (bb0045) 2015; 31 Koetschan, Kittelmann, Lu, Al-Halbouni, Jarvis, Muller, Wolf, Janssen (bb0125) 2014; 9 Nakhleh (bb0160) 2013; 28 Bart, van der Heijden, Greve, Speijer, Landman, van Gool (bb0030) 2008; 46 Markham, Zuker (bb0140) 2008; 453 Waples, Pess, Beechie (bb0185) 2008; 1 Ohnishi, Kikuchi, Furusawa, Kamata, Sugita-Konishi (bb0165) 2013; 10 Miller, Pfeiffer, Schwartz (bb0150) 2010 Darriba, Taboada, Doallo, Posada (bb0050) 2012; 9 Hasegawa, Kishino, Yano (bb0080) 1985; 22 Holzer, Bartosova-Sojkova, Born-Torrijos, Lovy, Hartigan, Fiala (bb0085) 2018; 27 Atkinson (10.1016/j.meegid.2019.104081_bb0015) 2014; 100 Hurst (10.1016/j.meegid.2019.104081_bb0105) 2012; 32 Bjork (10.1016/j.meegid.2019.104081_bb0040) 2009; 86 Hudson (10.1016/j.meegid.2019.104081_bb0090) 1992; 9 Hasegawa (10.1016/j.meegid.2019.104081_bb0080) 1985; 22 Drummond (10.1016/j.meegid.2019.104081_bb0055) 2007; 7 Atkinson (10.1016/j.meegid.2019.104081_bb0010) 2010; 10 Fiala (10.1016/j.meegid.2019.104081_bb0070) 2015; 86 Waples (10.1016/j.meegid.2019.104081_bb0185) 2008; 1 Ohnishi (10.1016/j.meegid.2019.104081_bb0165) 2013; 10 Jukes (10.1016/j.meegid.2019.104081_bb0115) 1969; 3 Nakhleh (10.1016/j.meegid.2019.104081_bb0160) 2013; 28 Atkinson (10.1016/j.meegid.2019.104081_bb0005) 2010; 40 Suchard (10.1016/j.meegid.2019.104081_bb0180) 2001; 18 Wolf (10.1016/j.meegid.2019.104081_bb0195) 2014; 546 Mattei (10.1016/j.meegid.2019.104081_bb0145) 2014; 42 Yahata (10.1016/j.meegid.2019.104081_bb0200) 2015; 68 Lemey (10.1016/j.meegid.2019.104081_bb0135) 2004; 167 Markham (10.1016/j.meegid.2019.104081_bb0140) 2008; 453 Atkinson (10.1016/j.meegid.2019.104081_bb0020) 2018; 145 Coleman (10.1016/j.meegid.2019.104081_bb0045) 2015; 31 Drummond (10.1016/j.meegid.2019.104081_bb0065) 2012; 29 Hallett (10.1016/j.meegid.2019.104081_bb0075) 2012; 78 Hurst (10.1016/j.meegid.2019.104081_bb0110) 2014; 100 Kingman (10.1016/j.meegid.2019.104081_bb0120) 1982; 13 Bartholomew (10.1016/j.meegid.2019.104081_bb0035) 1997; 83 Miller (10.1016/j.meegid.2019.104081_bb0150) 2010 Wolf (10.1016/j.meegid.2019.104081_bb0190) 2005; 11 Darriba (10.1016/j.meegid.2019.104081_bb0050) 2012; 9 Drummond (10.1016/j.meegid.2019.104081_bb0060) 2005; 22 Bart (10.1016/j.meegid.2019.104081_bb0030) 2008; 46 Holzer (10.1016/j.meegid.2019.104081_bb0085) 2018; 27 Hurst (10.1016/j.meegid.2019.104081_bb0095) 2012; 35 Stinson (10.1016/j.meegid.2019.104081_bb0175) 2018; 104 Hurst (10.1016/j.meegid.2019.104081_bb0100) 2015; 27 Mowna Sundari (10.1016/j.meegid.2019.104081_bb0155) 2018; 8 Leitwein (10.1016/j.meegid.2019.104081_bb0130) 2017; 7 Koetschan (10.1016/j.meegid.2019.104081_bb0125) 2014; 9 Badotti (10.1016/j.meegid.2019.104081_bb0025) 2018; 41 Pond (10.1016/j.meegid.2019.104081_bb0170) 2005; 21
References_xml	– volume: 86 start-page: 29 year: 2009 end-page: 37 ident: bb0040 article-title: Effects of Ceratomyxa shasta dose on a susceptible strain of rainbow trout and comparatively resistant Chinook and coho salmon publication-title: Dis. Aquat. Org. – volume: 29 start-page: 1969 year: 2012 end-page: 1973 ident: bb0065 article-title: Bayesian phylogenetics with BEAUti and the BEAST 1.7 publication-title: Mol. Biol. Evol. – volume: 27 start-page: 20 year: 2015 end-page: 24 ident: bb0100 article-title: Lack of protection following re-exposure of Chinook Salmon to Ceratonova shasta (Myxozoa) publication-title: J. Aquat. Anim. Health – volume: 27 start-page: 1651 year: 2018 end-page: 1666 ident: bb0085 article-title: The joint evolution of the Myxozoa and their alternate hosts: a cnidarian recipe for success and vast biodiversity publication-title: Mol. Ecol. – volume: 3 start-page: 132 year: 1969 ident: bb0115 article-title: Evolution of protein molecules publication-title: Mamm. Protein Metab. – volume: 83 start-page: 859 year: 1997 end-page: 868 ident: bb0035 article-title: The life cycle of Ceratomyxa shasta, a myxosporean parasite of salmonids, requires a freshwater polychaete as an alternate host publication-title: J. Parasitol. – volume: 453 start-page: 3 year: 2008 end-page: 31 ident: bb0140 article-title: UNAFold: software for nucleic acid folding and hybridization publication-title: Methods Mol. Biol. – volume: 22 start-page: 160 year: 1985 end-page: 174 ident: bb0080 article-title: Dating the human-ape splitting by a molecular clock of mitochondrial DNA publication-title: J. Mol. Evol. – volume: 32 start-page: 14 year: 2012 end-page: 23 ident: bb0105 article-title: Dam removal and implications for fish health: ceratomyxa shasta in the Williamson River, Oregon, USA publication-title: N. Am. J. Fish Manag. – volume: 7 start-page: 1365 year: 2017 end-page: 1376 ident: bb0130 article-title: A dense Brown Trout (Salmo trutta) linkage map reveals recent chromosomal rearrangements in the Salmo Genus and the impact of selection on linked neutral diversity publication-title: G3 (Bethesda) – volume: 42 start-page: 6146 year: 2014 end-page: 6157 ident: bb0145 article-title: A novel approach to represent and compare RNA secondary structures publication-title: Nucleic Acids Res. – volume: 40 start-page: 599 year: 2010 end-page: 604 ident: bb0005 article-title: Disparate infection patterns of Ceratomyxa shasta (Myxozoa) in rainbow trout (Oncorhynchus mykiss) and Chinook salmon (Oncorhynchus tshawytscha) correlate with internal transcribed spacer-1 sequence variation in the parasite publication-title: Int. J. Parasitol. – volume: 13 start-page: 235 year: 1982 end-page: 248 ident: bb0120 article-title: The coalescent publication-title: Stoch. Process. Appl. – volume: 167 start-page: 1059 year: 2004 end-page: 1068 ident: bb0135 article-title: The molecular population genetics of HIV-1 group O publication-title: Genetics – volume: 31 start-page: 157 year: 2015 end-page: 163 ident: bb0045 article-title: Nuclear rRNA transcript processing versus internal transcribed spacer secondary structure publication-title: Trends Genet. – volume: 86 start-page: 75 year: 2015 end-page: 89 ident: bb0070 article-title: Evolutionary origin of Ceratonova shasta and phylogeny of the marine myxosporean lineage publication-title: Mol. Phylogenet. Evol. – volume: 7 start-page: 214 year: 2007 ident: bb0055 article-title: BEAST: Bayesian evolutionary analysis by sampling trees publication-title: BMC Evol. Biol. – start-page: 1 year: 2010 end-page: 8 ident: bb0150 article-title: Creating the CIPRES Science Gateway for inference of large phylogenetic trees. 2010 publication-title: Gateway Computing Environments Workshop (GCE) – volume: 22 start-page: 1185 year: May 2005 end-page: 1192 ident: bb0060 article-title: Bayesian coalescent inference of past population dynamics from molecular sequences publication-title: Mol. Biol. Evol. – volume: 546 start-page: 145 year: 2014 end-page: 149 ident: bb0195 article-title: ITS2, 18S, 16S or any other RNA - simply aligning sequences and their individual secondary structures simultaneously by an automatic approach publication-title: Gene – volume: 18 start-page: 1001 year: 2001 end-page: 1013 ident: bb0180 article-title: Bayesian selection of continuous-time Markov chain evolutionary models publication-title: Mol. Biol. Evol. – volume: 11 start-page: 1616 year: 2005 end-page: 1623 ident: bb0190 article-title: Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures publication-title: RNA – volume: 104 start-page: 645 year: 2018 end-page: 650 ident: bb0175 article-title: Widespread distribution of Ceratonova Shasta (Cnidaria:myxosporea) genotypes indicates both evolutionary adaptation to its Salmonid Fish Hosts publication-title: J. Parasitol. – volume: 10 start-page: 137 year: 2013 end-page: 142 ident: bb0165 article-title: Kudoa septempunctata invasion increases the permeability of human intestinal epithelial monolayer publication-title: Foodborne Pathog. Dis. – volume: 100 start-page: 773 year: 2014 end-page: 777 ident: bb0110 article-title: Transmission and persistence of Ceratonova shasta genotypes in Chinook salmon publication-title: J. Parasitol. – volume: 46 start-page: 3270 year: 2008 end-page: 3275 ident: bb0030 article-title: Intragenomic variation in the internal transcribed spacer 1 region of Dientamoeba fragilis as a molecular epidemiological marker publication-title: J. Clin. Microbiol. – volume: 78 start-page: 3724 year: 2012 end-page: 3731 ident: bb0075 article-title: Density of the waterborne parasite Ceratomyxa shasta and its biological effects on salmon publication-title: Appl. Environ. Microbiol. – volume: 35 start-page: 725 year: 2012 end-page: 732 ident: bb0095 article-title: Ceratomyxa shasta genotypes cause differential mortality in their salmonid hosts publication-title: J. Fish Dis. – volume: 41 start-page: 9 year: 2018 end-page: 2018 ident: bb0025 article-title: ITS and secondary biomarkers in fungi: review on the evolution of their use based on scientific publications – volume: 28 start-page: 719 year: 2013 end-page: 728 ident: bb0160 article-title: Computational approaches to species phylogeny inference and gene tree reconciliation publication-title: Trends Ecol. Evol. – volume: 145 start-page: 1588 year: 2018 end-page: 1593 ident: bb0020 article-title: Genotyping of individual Ceratonova shasta (Cnidaria: Myxosporea) myxospores reveals intra-spore ITS-1 variation and invalidates the distinction of genotypes II and III publication-title: Parasitology – volume: 100 start-page: 640 year: 2014 end-page: 645 ident: bb0015 article-title: Erection of Ceratonova n. gen. (Myxosporea: Ceratomyxidae) to encompass freshwater species C. gasterostea n. sp. from threespine stickleback (Gasterosteus aculeatus) and C. shasta n. comb. from salmonid fishes publication-title: J. Parasitol. – volume: 9 start-page: 138 year: 1992 end-page: 151 ident: bb0090 article-title: A statistical test for detecting geographic subdivision publication-title: Mol. Biol. Evol. – volume: 21 start-page: 2531 year: 2005 end-page: 2533 ident: bb0170 article-title: Datamonkey: rapid detection of selective pressure on individual sites of codon alignments publication-title: Bioinformatics – volume: 9 start-page: 772 year: 2012 ident: bb0050 article-title: jModelTest 2: more models, new heuristics and parallel computing publication-title: Nat. Methods – volume: 8 year: 2018 ident: bb0155 article-title: Bioprospection of Basidiomycetes and molecular phylogenetic analysis using internal transcribed spacer (ITS) and 5.8S rRNA gene sequence publication-title: Sci. Rep. – volume: 68 start-page: 119 year: 2015 end-page: 123 ident: bb0200 article-title: Kudoa septempunctata-induced gastroenteritis in humans after flounder consumption in Japan: a case-controlled study publication-title: Jpn. J. Infect. Dis. – volume: 9 year: 2014 ident: bb0125 article-title: Internal transcribed spacer 1 secondary structure analysis reveals a common core throughout the anaerobic fungi (Neocallimastigomycota) publication-title: PLoS One – volume: 1 start-page: 189 year: 2008 end-page: 206 ident: bb0185 article-title: Evolutionary history of Pacific salmon in dynamic environments publication-title: Evol. Appl. – volume: 10 start-page: 1019 year: 2010 end-page: 1026 ident: bb0010 article-title: Spatial, temporal and host factors structure the Ceratomyxa shasta (Myxozoa) population in the Klamath River basin publication-title: Infect. Genet. Evol. – volume: 9 start-page: 772 year: 2012 ident: 10.1016/j.meegid.2019.104081_bb0050 article-title: jModelTest 2: more models, new heuristics and parallel computing publication-title: Nat. Methods doi: 10.1038/nmeth.2109 – volume: 104 start-page: 645 issue: 6 year: 2018 ident: 10.1016/j.meegid.2019.104081_bb0175 article-title: Widespread distribution of Ceratonova Shasta (Cnidaria:myxosporea) genotypes indicates both evolutionary adaptation to its Salmonid Fish Hosts publication-title: J. Parasitol. doi: 10.1645/18-79 – volume: 7 start-page: 1365 year: 2017 ident: 10.1016/j.meegid.2019.104081_bb0130 article-title: A dense Brown Trout (Salmo trutta) linkage map reveals recent chromosomal rearrangements in the Salmo Genus and the impact of selection on linked neutral diversity publication-title: G3 (Bethesda) doi: 10.1534/g3.116.038497 – volume: 86 start-page: 29 year: 2009 ident: 10.1016/j.meegid.2019.104081_bb0040 article-title: Effects of Ceratomyxa shasta dose on a susceptible strain of rainbow trout and comparatively resistant Chinook and coho salmon publication-title: Dis. Aquat. Org. doi: 10.3354/dao02092 – volume: 78 start-page: 3724 year: 2012 ident: 10.1016/j.meegid.2019.104081_bb0075 article-title: Density of the waterborne parasite Ceratomyxa shasta and its biological effects on salmon publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.07801-11 – volume: 546 start-page: 145 year: 2014 ident: 10.1016/j.meegid.2019.104081_bb0195 article-title: ITS2, 18S, 16S or any other RNA - simply aligning sequences and their individual secondary structures simultaneously by an automatic approach publication-title: Gene doi: 10.1016/j.gene.2014.05.065 – volume: 1 start-page: 189 year: 2008 ident: 10.1016/j.meegid.2019.104081_bb0185 article-title: Evolutionary history of Pacific salmon in dynamic environments publication-title: Evol. Appl. doi: 10.1111/j.1752-4571.2008.00023.x – volume: 83 start-page: 859 year: 1997 ident: 10.1016/j.meegid.2019.104081_bb0035 article-title: The life cycle of Ceratomyxa shasta, a myxosporean parasite of salmonids, requires a freshwater polychaete as an alternate host publication-title: J. Parasitol. doi: 10.2307/3284281 – volume: 453 start-page: 3 year: 2008 ident: 10.1016/j.meegid.2019.104081_bb0140 article-title: UNAFold: software for nucleic acid folding and hybridization publication-title: Methods Mol. Biol. doi: 10.1007/978-1-60327-429-6_1 – volume: 28 start-page: 719 year: 2013 ident: 10.1016/j.meegid.2019.104081_bb0160 article-title: Computational approaches to species phylogeny inference and gene tree reconciliation publication-title: Trends Ecol. Evol. doi: 10.1016/j.tree.2013.09.004 – volume: 22 start-page: 1185 year: 2005 ident: 10.1016/j.meegid.2019.104081_bb0060 article-title: Bayesian coalescent inference of past population dynamics from molecular sequences publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/msi103 – volume: 10 start-page: 1019 year: 2010 ident: 10.1016/j.meegid.2019.104081_bb0010 article-title: Spatial, temporal and host factors structure the Ceratomyxa shasta (Myxozoa) population in the Klamath River basin publication-title: Infect. Genet. Evol. doi: 10.1016/j.meegid.2010.06.013 – start-page: 1 year: 2010 ident: 10.1016/j.meegid.2019.104081_bb0150 article-title: Creating the CIPRES Science Gateway for inference of large phylogenetic trees. 2010 – volume: 41 start-page: 9 issue: 2 year: 2018 ident: 10.1016/j.meegid.2019.104081_bb0025 article-title: ITS and secondary biomarkers in fungi: review on the evolution of their use based on scientific publications – volume: 27 start-page: 1651 year: 2018 ident: 10.1016/j.meegid.2019.104081_bb0085 article-title: The joint evolution of the Myxozoa and their alternate hosts: a cnidarian recipe for success and vast biodiversity publication-title: Mol. Ecol. doi: 10.1111/mec.14558 – volume: 22 start-page: 160 year: 1985 ident: 10.1016/j.meegid.2019.104081_bb0080 article-title: Dating the human-ape splitting by a molecular clock of mitochondrial DNA publication-title: J. Mol. Evol. doi: 10.1007/BF02101694 – volume: 35 start-page: 725 year: 2012 ident: 10.1016/j.meegid.2019.104081_bb0095 article-title: Ceratomyxa shasta genotypes cause differential mortality in their salmonid hosts publication-title: J. Fish Dis. doi: 10.1111/j.1365-2761.2012.01407.x – volume: 10 start-page: 137 year: 2013 ident: 10.1016/j.meegid.2019.104081_bb0165 article-title: Kudoa septempunctata invasion increases the permeability of human intestinal epithelial monolayer publication-title: Foodborne Pathog. Dis. doi: 10.1089/fpd.2012.1294 – volume: 11 start-page: 1616 year: 2005 ident: 10.1016/j.meegid.2019.104081_bb0190 article-title: Homology modeling revealed more than 20,000 rRNA internal transcribed spacer 2 (ITS2) secondary structures publication-title: RNA doi: 10.1261/rna.2144205 – volume: 18 start-page: 1001 year: 2001 ident: 10.1016/j.meegid.2019.104081_bb0180 article-title: Bayesian selection of continuous-time Markov chain evolutionary models publication-title: Mol. Biol. Evol. doi: 10.1093/oxfordjournals.molbev.a003872 – volume: 3 start-page: 132 year: 1969 ident: 10.1016/j.meegid.2019.104081_bb0115 article-title: Evolution of protein molecules publication-title: Mamm. Protein Metab. – volume: 32 start-page: 14 year: 2012 ident: 10.1016/j.meegid.2019.104081_bb0105 article-title: Dam removal and implications for fish health: ceratomyxa shasta in the Williamson River, Oregon, USA publication-title: N. Am. J. Fish Manag. doi: 10.1080/02755947.2012.655843 – volume: 27 start-page: 20 year: 2015 ident: 10.1016/j.meegid.2019.104081_bb0100 article-title: Lack of protection following re-exposure of Chinook Salmon to Ceratonova shasta (Myxozoa) publication-title: J. Aquat. Anim. Health doi: 10.1080/08997659.2014.970716 – volume: 21 start-page: 2531 year: 2005 ident: 10.1016/j.meegid.2019.104081_bb0170 article-title: Datamonkey: rapid detection of selective pressure on individual sites of codon alignments publication-title: Bioinformatics doi: 10.1093/bioinformatics/bti320 – volume: 29 start-page: 1969 year: 2012 ident: 10.1016/j.meegid.2019.104081_bb0065 article-title: Bayesian phylogenetics with BEAUti and the BEAST 1.7 publication-title: Mol. Biol. Evol. doi: 10.1093/molbev/mss075 – volume: 86 start-page: 75 year: 2015 ident: 10.1016/j.meegid.2019.104081_bb0070 article-title: Evolutionary origin of Ceratonova shasta and phylogeny of the marine myxosporean lineage publication-title: Mol. Phylogenet. Evol. doi: 10.1016/j.ympev.2015.03.004 – volume: 9 start-page: 138 year: 1992 ident: 10.1016/j.meegid.2019.104081_bb0090 article-title: A statistical test for detecting geographic subdivision publication-title: Mol. Biol. Evol. – volume: 100 start-page: 640 year: 2014 ident: 10.1016/j.meegid.2019.104081_bb0015 article-title: Erection of Ceratonova n. gen. (Myxosporea: Ceratomyxidae) to encompass freshwater species C. gasterostea n. sp. from threespine stickleback (Gasterosteus aculeatus) and C. shasta n. comb. from salmonid fishes publication-title: J. Parasitol. doi: 10.1645/13-434.1 – volume: 13 start-page: 235 year: 1982 ident: 10.1016/j.meegid.2019.104081_bb0120 article-title: The coalescent publication-title: Stoch. Process. Appl. doi: 10.1016/0304-4149(82)90011-4 – volume: 8 year: 2018 ident: 10.1016/j.meegid.2019.104081_bb0155 article-title: Bioprospection of Basidiomycetes and molecular phylogenetic analysis using internal transcribed spacer (ITS) and 5.8S rRNA gene sequence publication-title: Sci. Rep. doi: 10.1038/s41598-018-29046-w – volume: 9 year: 2014 ident: 10.1016/j.meegid.2019.104081_bb0125 article-title: Internal transcribed spacer 1 secondary structure analysis reveals a common core throughout the anaerobic fungi (Neocallimastigomycota) publication-title: PLoS One doi: 10.1371/journal.pone.0091928 – volume: 68 start-page: 119 year: 2015 ident: 10.1016/j.meegid.2019.104081_bb0200 article-title: Kudoa septempunctata-induced gastroenteritis in humans after flounder consumption in Japan: a case-controlled study publication-title: Jpn. J. Infect. Dis. doi: 10.7883/yoken.JJID.2014.027 – volume: 145 start-page: 1588 year: 2018 ident: 10.1016/j.meegid.2019.104081_bb0020 article-title: Genotyping of individual Ceratonova shasta (Cnidaria: Myxosporea) myxospores reveals intra-spore ITS-1 variation and invalidates the distinction of genotypes II and III publication-title: Parasitology doi: 10.1017/S0031182018000422 – volume: 46 start-page: 3270 year: 2008 ident: 10.1016/j.meegid.2019.104081_bb0030 article-title: Intragenomic variation in the internal transcribed spacer 1 region of Dientamoeba fragilis as a molecular epidemiological marker publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.00680-08 – volume: 31 start-page: 157 year: 2015 ident: 10.1016/j.meegid.2019.104081_bb0045 article-title: Nuclear rRNA transcript processing versus internal transcribed spacer secondary structure publication-title: Trends Genet. doi: 10.1016/j.tig.2015.01.002 – volume: 40 start-page: 599 year: 2010 ident: 10.1016/j.meegid.2019.104081_bb0005 article-title: Disparate infection patterns of Ceratomyxa shasta (Myxozoa) in rainbow trout (Oncorhynchus mykiss) and Chinook salmon (Oncorhynchus tshawytscha) correlate with internal transcribed spacer-1 sequence variation in the parasite publication-title: Int. J. Parasitol. doi: 10.1016/j.ijpara.2009.10.010 – volume: 7 start-page: 214 year: 2007 ident: 10.1016/j.meegid.2019.104081_bb0055 article-title: BEAST: Bayesian evolutionary analysis by sampling trees publication-title: BMC Evol. Biol. doi: 10.1186/1471-2148-7-214 – volume: 167 start-page: 1059 year: 2004 ident: 10.1016/j.meegid.2019.104081_bb0135 article-title: The molecular population genetics of HIV-1 group O publication-title: Genetics doi: 10.1534/genetics.104.026666 – volume: 42 start-page: 6146 year: 2014 ident: 10.1016/j.meegid.2019.104081_bb0145 article-title: A novel approach to represent and compare RNA secondary structures publication-title: Nucleic Acids Res. doi: 10.1093/nar/gku283 – volume: 100 start-page: 773 year: 2014 ident: 10.1016/j.meegid.2019.104081_bb0110 article-title: Transmission and persistence of Ceratonova shasta genotypes in Chinook salmon publication-title: J. Parasitol. doi: 10.1645/13-482.1
SSID	ssj0017028
Score	2.2711134
Snippet	The myxozoan parasite Ceratonova shasta is an important pathogen that infects multiple species of Pacific salmonids. Ongoing genetic surveillance has revealed...
SourceID	proquest pubmed crossref elsevier
SourceType	Aggregation Database Index Database Enrichment Source Publisher
StartPage	104081
SubjectTerms	Adaptation, Physiological ancestry Animals basins Bayes Theorem Bayesian phylogenetics California Ceratomyxa shasta Ceratonova shasta Gasterosteus aculeatus Genotype Host Specificity Host-Parasite Interactions hosts infection ITS-1 Klamath River monitoring Myxozoa - classification Myxozoa - genetics Myxozoa - physiology Oncorhynchus kisutch Oncorhynchus mykiss Oncorhynchus tshawytscha Oregon Pacific salmon parasites pathogens Phylogeny Rhinichthys osculus rivers rRNA Salmonidae - genetics Salmonidae - parasitology Sequence Analysis, DNA - methods watersheds
Title	Evolutionary dynamics of Ceratonova species (Cnidaria: Myxozoa) reveal different host adaptation strategies
URI	https://dx.doi.org/10.1016/j.meegid.2019.104081 https://www.ncbi.nlm.nih.gov/pubmed/31676446 https://www.proquest.com/docview/2311652132 https://www.proquest.com/docview/2551952291
Volume	78
WOSCitedRecordID	wos000510876600014&url=https%3A%2F%2Fcvtisr.summon.serialssolutions.com%2F%23%21%2Fsearch%3Fho%3Df%26include.ft.matches%3Dt%26l%3Dnull%26q%3D
hasFullText	1
inHoldings	1
isFullTextHit
isPrint
journalDatabaseRights	– providerCode: PRVESC databaseName: ScienceDirect database customDbUrl: eissn: 1567-7257 dateEnd: 99991231 omitProxy: false ssIdentifier: ssj0017028 issn: 1567-1348 databaseCode: AIEXJ dateStart: 20010701 isFulltext: true titleUrlDefault: https://www.sciencedirect.com providerName: Elsevier
link	http://cvtisr.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV3Nb9MwFLfYxgFpQnwzPiYjIQSqglqniRNuperEplI4dFJvlhPbUjeWZGs2dfz1vBfbySQYGwcuUWTZrpP3y-v7foS8ZYoNMmWigGmJbkY2DFLNVMAiFfe5UTnPm5L5Uz6bJYtF-t25C1ZNOwFeFMl6nVb_ldQwBsTG1Nl_IHe7KQzAPRAdrkB2uN6K8JMLtz3GwynbcL6J1xhj_eQSm6D2ML9yaQ2u42KpQF9uWvR8vVyXP0uJlgKs7NT4b2z_lLqH2SA9qWTlwhNXtS8ycVW-3XexXQ0vgyPqtgq09sfqDAD60omuWFS6jfQY1cdtRpqLQevCkj_DAyO_PtGNS-rAJU04swXoqG3clue0wKEHoS2z6VkxT3oVep1BTgn-yN-tqeHo44mGB8RCr4PUze_-z7wPf_ZN7B1Op2I-WczfVacBdhpDj7xru7JBthiPUuCEW6P9yeKg9T3xftORtz2gT7hsogJ__-HrBJrrFJZGcJk_IPedxkFHFikPyR1dPCLb1lxLbRbaY3J8FTXUo4aWhnaooQ419L3HzCfqEPOBWrzQFi8U8UI7vNAOL0_I4d5kPv4SuD4cQR6mUR3oYQxfc6wkT0Ito1THoOSaJFf9NOOJNMlQKWMiluVqKKXKdCwz0CKkhleoQGEIn5LNoiz0c0Jz0Hb7JoFREw4j2C0HWSFmKjYGJO8o2yGhf5kid0XqsVfKD-GjEY-EJYFAEghLgh0StKsqW6Tlhvnc00k4QdMKkAJwdsPKN56sAvgwOtdkocvzlQA9aRCDLByyv8yJsJYTYyns88xioj0vVqQA3SR-cYvVL8m97pN6RTbrs3P9mtzNL-rl6myXbPBFsutQ_QtklsPx
linkProvider	Elsevier
openUrl	ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Evolutionary+dynamics+of+Ceratonova+species+%28Cnidaria%3A+Myxozoa%29+reveal+different+host+adaptation+strategies&rft.jtitle=Infection%2C+genetics+and+evolution&rft.au=Breyta%2C+Rachel&rft.au=Atkinson%2C+Stephen+D&rft.au=Bartholomew%2C+J+L&rft.date=2020-03-01&rft.issn=1567-1348&rft.volume=78+p.104081-&rft_id=info:doi/10.1016%2Fj.meegid.2019.104081&rft.externalDBID=NO_FULL_TEXT
thumbnail_l	http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1567-1348&client=summon
thumbnail_m	http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1567-1348&client=summon
thumbnail_s	http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1567-1348&client=summon