Genome-wide association mapping reveals key genomic regions for physiological and yield-related traits under salinity stress in wheat (Triticum aestivum L.)

A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying reproductive stage salinity tolerance. Marker-trait association analysis was performed for salt tolerance indices (STI) of 11 morpho-physiologica...

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Published in:	Genomics (San Diego, Calif.) Vol. 113; no. 5; pp. 3198 - 3215
Main Authors:	Chaurasia, Shiksha, Singh, Amit Kumar, Kumar, Arvind, Songachan, L.S., Yadav, Mahesh C., Kumar, Sundeep, Kumari, Jyoti, Bansal, Ruchi, Sharma, Parbodh Chander, Singh, Kuldeep
Format:	Journal Article
Language:	English
Published:	United States Elsevier Inc 01.09.2021
Subjects:	Association mapping biomass Bread wheat Genome-Wide Association Study Genomics grain yield leaves Multi-locus GWAS nucleotides Phenotype plant height Polymorphism, Single Nucleotide Quantitative Trait Loci quantitative traits Salinity Salt Stress salt tolerance single nucleotide polymorphism arrays Triticum - genetics Triticum aestivum wheat Association mapping Bread wheat Multi-locus GWAS Salinity
ISSN:	0888-7543, 1089-8646, 1089-8646
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Abstract	A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying reproductive stage salinity tolerance. Marker-trait association analysis was performed for salt tolerance indices (STI) of 11 morpho-physiological traits, and the actual concentrations of Na+ and K+, and the Na+/K+ ratio in flag leaf. A total of 293 significantly associated quantitative trait nucleotides (QTNs) for 14 morpho-physiological traits were identified. Of these 293 QTNs, 12 major QTNs with R2 ≥ 10.0% were detected in three or more GWAS models. Novel major QTNs were identified for plant height, number of effective tillers, biomass, grain yield, thousand grain weight, Na+ and K+ content, and the Na+/K+ ratio in flag leaf. Moreover, 48 candidate genes were identified from the associated genomic regions. The QTNs identified in this study could potentially be targeted for improving salinity tolerance in wheat. •Fifty consistent genomic regions were demarcated for 13 morpho-physiological traits using six multi-locus GWAS models.•Four highly consistent QTNs/genomic regions, one each for flag leaf Na+ content (Q.Na-6AL), flag leaf K+ content (Q.K-1AS), above ground biomass (Q.STI-BM-1BL) and Na+/K+ Ratio (Q.NaK-1BS) were identified.•Wheat chromosome 5B harbored the maximum number of genomic regions for yield contributing traits.•The identified QTN regions contained some important stress responsive candidate genes encoding for cytochrome 450 (CYP) family protein, detoxification protein, auxin responsive protein, MYB family transcription factor and peptidylprolyl isomerase (PPI).•ISIS EM-BLASSO is the most efficient model for multi-trait mapping of reproductive stage salinity tolerance.
AbstractList	A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying reproductive stage salinity tolerance. Marker-trait association analysis was performed for salt tolerance indices (STI) of 11 morpho-physiological traits, and the actual concentrations of Na+ and K+, and the Na+/K+ ratio in flag leaf. A total of 293 significantly associated quantitative trait nucleotides (QTNs) for 14 morpho-physiological traits were identified. Of these 293 QTNs, 12 major QTNs with R2 ≥ 10.0% were detected in three or more GWAS models. Novel major QTNs were identified for plant height, number of effective tillers, biomass, grain yield, thousand grain weight, Na+ and K+ content, and the Na+/K+ ratio in flag leaf. Moreover, 48 candidate genes were identified from the associated genomic regions. The QTNs identified in this study could potentially be targeted for improving salinity tolerance in wheat.A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying reproductive stage salinity tolerance. Marker-trait association analysis was performed for salt tolerance indices (STI) of 11 morpho-physiological traits, and the actual concentrations of Na+ and K+, and the Na+/K+ ratio in flag leaf. A total of 293 significantly associated quantitative trait nucleotides (QTNs) for 14 morpho-physiological traits were identified. Of these 293 QTNs, 12 major QTNs with R2 ≥ 10.0% were detected in three or more GWAS models. Novel major QTNs were identified for plant height, number of effective tillers, biomass, grain yield, thousand grain weight, Na+ and K+ content, and the Na+/K+ ratio in flag leaf. Moreover, 48 candidate genes were identified from the associated genomic regions. The QTNs identified in this study could potentially be targeted for improving salinity tolerance in wheat. A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying reproductive stage salinity tolerance. Marker-trait association analysis was performed for salt tolerance indices (STI) of 11 morpho-physiological traits, and the actual concentrations of Na and K , and the Na /K ratio in flag leaf. A total of 293 significantly associated quantitative trait nucleotides (QTNs) for 14 morpho-physiological traits were identified. Of these 293 QTNs, 12 major QTNs with R ≥ 10.0% were detected in three or more GWAS models. Novel major QTNs were identified for plant height, number of effective tillers, biomass, grain yield, thousand grain weight, Na and K content, and the Na /K ratio in flag leaf. Moreover, 48 candidate genes were identified from the associated genomic regions. The QTNs identified in this study could potentially be targeted for improving salinity tolerance in wheat. A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying reproductive stage salinity tolerance. Marker-trait association analysis was performed for salt tolerance indices (STI) of 11 morpho-physiological traits, and the actual concentrations of Na+ and K+, and the Na+/K+ ratio in flag leaf. A total of 293 significantly associated quantitative trait nucleotides (QTNs) for 14 morpho-physiological traits were identified. Of these 293 QTNs, 12 major QTNs with R2 ≥ 10.0% were detected in three or more GWAS models. Novel major QTNs were identified for plant height, number of effective tillers, biomass, grain yield, thousand grain weight, Na+ and K+ content, and the Na+/K+ ratio in flag leaf. Moreover, 48 candidate genes were identified from the associated genomic regions. The QTNs identified in this study could potentially be targeted for improving salinity tolerance in wheat. •Fifty consistent genomic regions were demarcated for 13 morpho-physiological traits using six multi-locus GWAS models.•Four highly consistent QTNs/genomic regions, one each for flag leaf Na+ content (Q.Na-6AL), flag leaf K+ content (Q.K-1AS), above ground biomass (Q.STI-BM-1BL) and Na+/K+ Ratio (Q.NaK-1BS) were identified.•Wheat chromosome 5B harbored the maximum number of genomic regions for yield contributing traits.•The identified QTN regions contained some important stress responsive candidate genes encoding for cytochrome 450 (CYP) family protein, detoxification protein, auxin responsive protein, MYB family transcription factor and peptidylprolyl isomerase (PPI).•ISIS EM-BLASSO is the most efficient model for multi-trait mapping of reproductive stage salinity tolerance. A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying reproductive stage salinity tolerance. Marker-trait association analysis was performed for salt tolerance indices (STI) of 11 morpho-physiological traits, and the actual concentrations of Na⁺ and K⁺, and the Na⁺/K⁺ ratio in flag leaf. A total of 293 significantly associated quantitative trait nucleotides (QTNs) for 14 morpho-physiological traits were identified. Of these 293 QTNs, 12 major QTNs with R² ≥ 10.0% were detected in three or more GWAS models. Novel major QTNs were identified for plant height, number of effective tillers, biomass, grain yield, thousand grain weight, Na⁺ and K⁺ content, and the Na⁺/K⁺ ratio in flag leaf. Moreover, 48 candidate genes were identified from the associated genomic regions. The QTNs identified in this study could potentially be targeted for improving salinity tolerance in wheat.
Author	Bansal, Ruchi Songachan, L.S. Singh, Amit Kumar Kumar, Arvind Sharma, Parbodh Chander Kumari, Jyoti Singh, Kuldeep Chaurasia, Shiksha Yadav, Mahesh C. Kumar, Sundeep
Author_xml	– sequence: 1 givenname: Shiksha surname: Chaurasia fullname: Chaurasia, Shiksha organization: Division of Genomic Resources, ICAR-National Bureau of Plant Genetic Resources, Pusa Campus, New Delhi 110012, India – sequence: 2 givenname: Amit Kumar surname: Singh fullname: Singh, Amit Kumar email: amit.singh5@icar.gov.in organization: Division of Genomic Resources, ICAR-National Bureau of Plant Genetic Resources, Pusa Campus, New Delhi 110012, India – sequence: 3 givenname: Arvind surname: Kumar fullname: Kumar, Arvind organization: ICAR-Central Soil Salinity Research Institute, Karnal, Haryana, India – sequence: 4 givenname: L.S. surname: Songachan fullname: Songachan, L.S. organization: Department of Botany, Institute of Science, Banaras Hindu University, Varanasi 221005, India – sequence: 5 givenname: Mahesh C. surname: Yadav fullname: Yadav, Mahesh C. organization: Division of Genomic Resources, ICAR-National Bureau of Plant Genetic Resources, Pusa Campus, New Delhi 110012, India – sequence: 6 givenname: Sundeep surname: Kumar fullname: Kumar, Sundeep organization: Division of Genomic Resources, ICAR-National Bureau of Plant Genetic Resources, Pusa Campus, New Delhi 110012, India – sequence: 7 givenname: Jyoti surname: Kumari fullname: Kumari, Jyoti organization: Division of Germplasm Evaluation, ICAR-National Bureau of Plant Genetic Resources, Pusa Campus, New Delhi 110012, India – sequence: 8 givenname: Ruchi surname: Bansal fullname: Bansal, Ruchi organization: Division of Germplasm Evaluation, ICAR-National Bureau of Plant Genetic Resources, Pusa Campus, New Delhi 110012, India – sequence: 9 givenname: Parbodh Chander surname: Sharma fullname: Sharma, Parbodh Chander organization: ICAR-Central Soil Salinity Research Institute, Karnal, Haryana, India – sequence: 10 givenname: Kuldeep surname: Singh fullname: Singh, Kuldeep organization: ICAR-National Bureau of Plant Genetic Resources, Pusa Campus, New Delhi 110012, India
BackLink	https://www.ncbi.nlm.nih.gov/pubmed/34293475$$D View this record in MEDLINE/PubMed
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Cites_doi	10.1007/s40502-017-0319-7 10.1104/pp.106.086538 10.1111/pbi.12635 10.1007/s00122-018-3146-y 10.1038/sj.emboj.7600121 10.1046/j.1365-294X.2003.01833.x 10.1007/s10681-019-2533-z 10.1007/s00122-013-2139-0 10.1007/s00122-004-1902-7 10.1038/s41598-017-15726-6 10.1146/annurev.arplant.59.032607.092911 10.1038/hdy.2017.8 10.1111/pce.12898 10.1093/bioinformatics/bti610 10.1007/s10681-006-9247-8 10.1371/journal.pone.0205452 10.1155/2014/701596 10.1007/s00122-010-1357-y 10.1007/s13258-017-0523-x 10.4161/psb.25377 10.1093/bioinformatics/btv428 10.1071/CP09093 10.1104/pp.108.118117 10.1016/j.tplants.2015.06.008 10.1186/s12870-020-2270-4 10.1186/s12870-018-1476-1 10.1111/j.1365-294X.2005.02553.x 10.3389/fpls.2018.00734 10.3390/ijms19030647 10.1038/s41437-017-0007-4 10.3389/fphys.2017.00509 10.1007/s12284-010-9053-8 10.3389/fgene.2020.572975 10.1038/srep19444 10.1038/nbt.2120 10.1086/302959 10.3835/plantgenome2015.03.0013 10.1111/pbi.12690 10.3389/fpls.2015.00797 10.1186/s12870-020-02799-1 10.1111/nph.13519 10.1007/s11105-014-0726-0 10.3389/fpls.2020.549743 10.1007/s11032-013-9851-y 10.1007/BF00223692 10.1093/jhered/esi060 10.1016/j.plantsci.2020.110624 10.1093/bib/bbw145 10.3389/fpls.2018.01464 10.1016/j.ygeno.2020.08.006 10.1104/pp.104.057307 10.1016/j.cj.2016.06.003 10.1016/j.sjbs.2019.10.003 10.1038/35072085 10.3390/ijms21093156 10.1186/s12284-019-0349-z 10.1242/dev.01955 10.1556/0806.44.2016.009 10.1039/C1EE01029H 10.1111/jac.12178 10.1093/aob/mcg058 10.1093/jxb/err431 10.1007/BF02539518 10.1093/jxb/erj100 10.1038/s41588-019-0496-6 10.1371/journal.pcbi.1005357 10.1080/07352689.2014.875291 10.1016/j.jare.2019.10.013 10.1038/s41598-020-69442-9 10.1007/s12892-015-0064-2 10.1007/s10681-011-0463-5 10.1371/journal.pone.0213407 10.1111/ppa.13191 10.1071/EA01111 10.1186/s12870-019-1781-3 10.2307/2529707 10.18637/jss.v025.i01 10.3389/fpls.2019.01280 10.56093/ijas.v88i10.84255 10.1186/1471-2229-11-34 10.1371/journal.pone.0200669 10.1016/bs.adgen.2018.12.001 10.1016/j.bbrc.2017.07.150 10.1186/s12864-019-5992-7 10.1371/journal.pone.0182857 10.1016/j.cj.2017.08.005 10.1111/j.1757-837X.2012.00138.x
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References	Ma, Zhou, Huo, Zhou, Wang, Jia (bb0290) 2007; 153 Singh, Singh, Kumar, Chaurasia, Yadav, Kumar, Wankhede (bb0445) 2018 Pritchard, Stephens, Rosenberg, Donnelly (bb0380) 2000; 67 Liu, Hu, Li, Liu, Wu, Wang, Huang (bb0285) 2020; 20 Kiani, Arzani, Mirmohammady Maibody (bib546) 2021; 144 Asif, Schilling, Tilbrook, Brien, Dowling, Rabie, Short, Trittermann, Garcia, Barrett-Lennard, Berger (bb0030) 2018; 131 Yu, Ni, Chen, Y. (bb0530) 2017; 491 Asaoka, Uemura, Nishida, Fujiwara, Ueda, Nakano (bb0020) 2013; 8 Munns, Gilliham (bb0325) 2015; 208 Rana, Ram, Nehra, Sharma (bb0405) 2016; 44 Oyiga, Sharma, Shen, Baum, Ogbonnaya, Léon, Ballvora (bb0350) 2016; 202 Vogel (bb0480) 1955 Rodríguez, Alvarado, Pacheco, Burgueño (bb0425) 2018 Doyle, Doyle (bb0100) 1990; 12 De León, Escoppinichi, Geraldo, Castellanos, Mujeeb-Kazi, Röder (bb0095) 2011; 181 Kumar, Sharma, Lata, Devi, Kulshrestha, Krishnamurthy, Singh, Yadav (bb0245) 2018; 88 Shewry, Lafiandra, Bedo (bb0435) 2012; 4 Mauricio (bb0295) 2001; 2 Wen, Zhang, Ni, Huang, Zhang, Feng, Wang, Dunwell, Zhang, Wu (bb0515) 2018; 19 Wei, Simko (bb0510) 2021 Bilgrami, Ramandi, Shariati, Razavi, Tavakol, Fakheri, Nezhad, Ghaderian (bb0050) 2020; 10 Genc, Oldach, Gogel, Wallwork, McDonald, Smith (bb0155) 2013; 32 Pitman, Läuchli (bb0370) 2002 Wang, Yuan, Qin, Shi, Xia, Liu (bb0495) 2020; 18 Galili (bb0145) 2015 Goel, Singh, Singh, Grewal, Dwivedi, Alqarawi, Abdallah, Ahmad, Singh (bb0165) 2019; 14 Azadi, Mardi, Hervan, Mohammadi, Moradi, Tabatabaee, Pirseyedi, Ebrahimi, Fayaz, Kazemi, Ashkani (bb0040) 2015; 33 Harrell (bb0185) 2014 Kaler, Purcell (bb0225) 2019; 20 Davenport, James, Zakrisson-Plogander, Tester, Munns (bb0085) 2005; 137 Sun, Zhang, Yan, Zhang, Dong, Cui, Chen (bb0460) 2017; 15 Chaurasia, Singh, Songachan, Sharma, Bhardwaj, Singh (bb0065) 2020; 112 Guo, Jiang, Hu, Sun, Fan, Zhang (bb0180) 2018; 6 Wang, Feng, Ren, Huang, Zhou, Wen, Zhang, Dunwell, Xu, Zhang (bb0505) 2016; 6 Munns, Tester (bb0320) 2008; 59 Cui, Zhang, Zhou (bb0080) 2018; 9 Ilyas, Amjid, Saleem, Khan, Wattoo, Rana, Maqsood, Zahid, Shah, Anwar, Ahmad, Shaheen, Riaz, Ansari (bib549) 2020; 27 Munns, James, Xu, Athman, Conn, Jordans, Byrt, Hare, Tyerman, Tester, Plett, Gilliham (bb0330) 2012; 30 Yadav, Yashveer, Solanki, Singh (bb0490) 2018; 23 Alqudah, Sallam, Baenziger, Börner (bb0015) 2020; 22 Abhinandan, Skori, Stanic, Hickerson, Jamshed, Samuel (bb0005) 2018; 9 Hu, Zheng, Luo, Teng, Li, Li, Li (bb0195) 2021; 21 Fernandez (bb0130) 1992; 28 Philipp, Weichert, Bohra, Weschke, Schulthess, Weber (bb0365) 2018; 13 Zhang, Tamba (bb0545) 2018 Ruan, Ma, Wang, Fu, Xin, Liu, Wang, Tong, Wang, Chen (bb0430) 2011; 11 Tamba, Ni, Zhang (bb0465) 2017; 13 Hasan, Hafiz, Siddiqui, Khatun, Islam, Mamun (bb0190) 2015; 18 Mckay, Richards, Mitchell-Olds (bb0305) 2003; 12 Raman, Stodart, Cavanagh, Mackay, Morell, Milgate, Martin (bb0400) 2010; 61 Edwards, Shavrukov, Ramsey, Tester, Langridge, Schnurbusch (bb0110) 2008 Quarrie, Steed, Calestani, Semikhodskii, Lebreton, Chinoy, Steele, Pljevljakusić, Waterman, Weyen, Schondelmaier (bb0385) 2005; 110 Liu, Chen, Zhao, Wang, Shen, Zhu, Dai, Qiu, Yang, Xing, Pang (bb0280) 2019; 12 Evanno, Regnaut, Goudet (bb0115) 2005; 14 Wicke, Smeets, Dornburg, Vashev, Gaiser, Turkenburg, Faaij (bb0520) 2011; 4 Oyiga, Sharma, Baum, Ogbonnaya, Léon, Ballvora (bb0355) 2018; 41 Gahlaut, Jaiswal, Tyagi, Singh, Sareen, Balyan, Gupta (bb0140) 2017; 12 Singh, Chaurasia, Kumar, Singh, Kumari, Yadav, Singh, Gaba, Jacob (bb0450) 2018; 18 Juliana, Poland, Huerta-Espino, Shrestha, Crossa, Crespo-Herrera, Toledo, Govindan, Mondal, Kumar, Bhavani (bb0215) 2019; 51 Assaha, Ueda, Saneoka, Al-Yahyai, Yaish (bb0035) 2017; 8 Kushiro, Okamoto, Nakabayashi, Yamagishi, Kitamura, Asami, Hirai, Koshiba, Kamiya, Nambara (bb0250) 2004; 23 Ren, Wen, Dunwell, Zhang (bb0415) 2018; 120 Shokat, Sehgal, Vikram, Liu, Singh (bb0440) 2020; 9 Gupta, Huang (bb0170) 2014 Devi, Ram, Rana, Malik, Pande, Singh (bb0090) 2019; 215 Julkowska, Testerink (bb0220) 2015; 20 Kumar, Kumari, Bhusal, Pradhan, Budhlakoti, Mishra, Chauhan, Kumar, Singh, Reynold, Singh, Singh, Sareen (bb0255) 2020; 11 Keisham, Mukherjee, Bhatla (bb0235) 2018; 19 Jafari-Shabestari, Corke, Qualset (bb0200) 1995; 42 Long, Dolstra, Malosetti (bib547) 2013; 126 Farooq, Hussain, Siddique (bb0120) 2014; 33 Zhang, Feng, Ni, Wen, Niu, Tamba, Yue, Song, Zhang (bb0540) 2017; 118 Thomson, de Ocampo, Egdane, Rahman, Sajise, Dante (bb0475) 2010; 3 Collins, Tardieu, Tuberosa (bb0075) 2008; 147 R Core Team: R (bb0410) 2016 PBTools, version 1.4 (bb0360) 2014 Ogbonnaya, Huang, Steadman, Emebiri, Dreccer, Lagudah, Munns (bb0345) 2008 Khan, Shirazi, Khan, Mujtaba, Islam, Mumtaz, Shereen, Ansari, Ashraf (bb0240) 2009; 41 Bainsla, Phuke, He, Gupta, Bishnoi, Sharma, Ataei, Dreisigacker, Juliana, Singh (bb0045) 2020 Rengasamy (bb0420) 2002; 42 Voss-Fels, Frisch, Qian, Kontowski, Friedt, Gottwald, Snowdon (bb0485) 2015; 8 Lee, Park, Jung, Lee, Yoon, You, Kim, Kim, Ahn, Cho (bb0270) 2015; 6 Qaseem, Qureshi, Shaheen, Shafqat (bb0390) 2019; 14 Tester, Davenport (bb0470) 2003; 91 Gupta, Kulwal, Jaiswal (bb0175) 2019; 104 Hussain, Lucas, Ozturk (bib548) 2017; 7 Yang, Dai, Zhang (bb0525) 2012; 63 Pradhan, Kumar, Singh, Budhlakoti, Mishra, Chauhan, Mittal, Grover, Kumar, Gangwar, Kumar (bb0375) 2020; 11 Narjesi, Mardi, Hervan, Azadi, Naghavi, Ebrahimi, Zali (bb0335) 2015; 33 Allen, Winfield, Burridge, Downie, Benbow, Barker, Wilkinson, Coghill, Waterfall, Davassi, Scopes (bb0010) 2017; 15 Munns, James, Läuchli (bb0315) 2006; 57 Songa, Yanga, Fana, Zhangb, Sui (bb0455) 2020; 300 Li, Wen, Liu, Zhang, Cao, He, Zhang (bb0275) 2019; 19 Wang, Ma, Li, Li, Yang (bb0500) 2017; 39 Borojevic, Borojevic (bb0055) 2005; 96 Genc, Oldach, Verbyla, Lott, Hassan, Tester, Wallwork, McDonald (bb0150) 2010; 121 Dubcovsky, Santa Maria, Epstein, Luo, Dvořák (bb0105) 1996; 92 Genc, Taylor, Lyons, Li, Cheong, Appelbee, Oldach, Sutton (bb0160) 2019; 10 Nagpal, Ellis, Weber, Ploense, Barkawi, Guilfoyle, Hagen, Alonso, Cohen, Farmer, Ecker (bb0340) 2005; 132 Xu, Li, Yang, Xu (bb0535) 2017; 5 Kassambara, Mundt (bb0230) 2016 Federer, Raghavarao (bb0125) 1975 Lê, Josse, Husson (bb0260) 2008; 25 James, Davenport, Munns (bb0210) 2006; 142 Conesa, Götz, García-Gómez, Terol, Talón, Robles (bb0070) 2005; 21 Oyiga (10.1016/j.ygeno.2021.07.014_bb0355) 2018; 41 Khan (10.1016/j.ygeno.2021.07.014_bb0240) 2009; 41 Abhinandan (10.1016/j.ygeno.2021.07.014_bb0005) 2018; 9 Nagpal (10.1016/j.ygeno.2021.07.014_bb0340) 2005; 132 Wang (10.1016/j.ygeno.2021.07.014_bb0500) 2017; 39 Farooq (10.1016/j.ygeno.2021.07.014_bb0120) 2014; 33 Rana (10.1016/j.ygeno.2021.07.014_bb0405) 2016; 44 Doyle (10.1016/j.ygeno.2021.07.014_bb0100) 1990; 12 Devi (10.1016/j.ygeno.2021.07.014_bb0090) 2019; 215 Wang (10.1016/j.ygeno.2021.07.014_bb0495) 2020; 18 Keisham (10.1016/j.ygeno.2021.07.014_bb0235) 2018; 19 Wang (10.1016/j.ygeno.2021.07.014_bb0505) 2016; 6 Asaoka (10.1016/j.ygeno.2021.07.014_bb0020) 2013; 8 Wei (10.1016/j.ygeno.2021.07.014_bb0510) Kiani (10.1016/j.ygeno.2021.07.014_bib546) 2021; 144 Galili (10.1016/j.ygeno.2021.07.014_bb0145) 2015 Asif (10.1016/j.ygeno.2021.07.014_bb0030) 2018; 131 Lee (10.1016/j.ygeno.2021.07.014_bb0270) 2015; 6 Gahlaut (10.1016/j.ygeno.2021.07.014_bb0140) 2017; 12 Raman (10.1016/j.ygeno.2021.07.014_bb0400) 2010; 61 Vogel (10.1016/j.ygeno.2021.07.014_bb0480) 1955 De León (10.1016/j.ygeno.2021.07.014_bb0095) 2011; 181 Liu (10.1016/j.ygeno.2021.07.014_bb0280) 2019; 12 Pitman (10.1016/j.ygeno.2021.07.014_bb0370) 2002 Hu (10.1016/j.ygeno.2021.07.014_bb0195) 2021; 21 Munns (10.1016/j.ygeno.2021.07.014_bb0315) 2006; 57 Juliana (10.1016/j.ygeno.2021.07.014_bb0215) 2019; 51 Julkowska (10.1016/j.ygeno.2021.07.014_bb0220) 2015; 20 Shokat (10.1016/j.ygeno.2021.07.014_bb0440) 2020; 9 Fernandez (10.1016/j.ygeno.2021.07.014_bb0130) 1992; 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12 Goel (10.1016/j.ygeno.2021.07.014_bb0165) 2019; 14 Hussain (10.1016/j.ygeno.2021.07.014_bib548) 2017; 7 Azadi (10.1016/j.ygeno.2021.07.014_bb0040) 2015; 33 Xu (10.1016/j.ygeno.2021.07.014_bb0535) 2017; 5 Jafari-Shabestari (10.1016/j.ygeno.2021.07.014_bb0200) 1995; 42 Wen (10.1016/j.ygeno.2021.07.014_bb0515) 2018; 19 Hasan (10.1016/j.ygeno.2021.07.014_bb0190) 2015; 18 Tester (10.1016/j.ygeno.2021.07.014_bb0470) 2003; 91 Guo (10.1016/j.ygeno.2021.07.014_bb0180) 2018; 6 James (10.1016/j.ygeno.2021.07.014_bb0210) 2006; 142 Rodríguez (10.1016/j.ygeno.2021.07.014_bb0425) 2018 Yadav (10.1016/j.ygeno.2021.07.014_bb0490) 2018; 23 Kaler (10.1016/j.ygeno.2021.07.014_bb0225) 2019; 20 Oyiga (10.1016/j.ygeno.2021.07.014_bb0350) 2016; 202 Ma (10.1016/j.ygeno.2021.07.014_bb0290) 2007; 153 Yu (10.1016/j.ygeno.2021.07.014_bb0530) 2017; 491 Kumar (10.1016/j.ygeno.2021.07.014_bb0245) 2018; 88 Yang (10.1016/j.ygeno.2021.07.014_bb0525) 2012; 63 Liu (10.1016/j.ygeno.2021.07.014_bb0285) 2020; 20 Narjesi (10.1016/j.ygeno.2021.07.014_bb0335) 2015; 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References_xml	– year: 2018 ident: bb0445 article-title: Genomics technologies for improving salt tolerance in wheat publication-title: Engineering Practices for Management of Soil Salinity Agricultural, Physiological, and Adaptive Approaches – volume: 126 start-page: 2335 year: 2013 end-page: 2351 ident: bib547 article-title: Association mapping of salt tolerance in barley (Hordeum vulgare L.) publication-title: Theor. Appl. Genet. – volume: 8 year: 2013 ident: bb0020 article-title: New insights into the role of publication-title: Plant Signal. Behav. – volume: 121 start-page: 877 year: 2010 end-page: 894 ident: bb0150 article-title: Sodium exclusion QTL associated with improved seedling growth in bread wheat under salinity stress publication-title: Theor. Appl. Genet. – volume: 300 start-page: 110624 year: 2020 ident: bb0455 article-title: TaMYB86B encodes a R2R3-type MYB transcription factor and enhances salt tolerance in wheat publication-title: Plant Sci. – volume: 104 start-page: 75 year: 2019 end-page: 154 ident: bb0175 article-title: Association mapping in plants in the post-GWAS genomics era publication-title: Adv. Genet. – volume: 14 year: 2019 ident: bb0165 article-title: Analysis of genetic control and QTL mapping of essential wheat grain quality traits in a recombinant inbred population publication-title: PLoS One – year: 2016 ident: bb0230 article-title: factoextra: Extract and Visualize the Results of Multivariate Data Analyses – year: 1955 ident: bb0480 article-title: A Text-Book of Quantitative Inorganic Analysis: Theory and Practice – volume: 27 start-page: 341 year: 2020 end-page: 351 ident: bib549 article-title: Quantitative trait loci (QTL) mapping for physiological and biochemical attributes in a Pasban90/Frontana recombinant inbred lines (RILs) population of wheat (Triticum aestivum) under salt stress condition publication-title: Saudi J. Biol. Sci. – volume: 14 year: 2019 ident: bb0390 article-title: Genome-wide association analyses for yield and yield-related traits in bread wheat ( publication-title: PLoS One – volume: 147 start-page: 469 year: 2008 end-page: 486 ident: bb0075 article-title: Quantitative trait loci and crop performance under abiotic stress: where do we stand? publication-title: Plant Physiol. – volume: 491 start-page: 642 year: 2017 end-page: 648 ident: bb0530 article-title: The wheat salinity-induced R2R3-MYB transcription factor TaSIM confers salt stress tolerance in Arabidopsis thaliana publication-title: Biochem. Biophys. Res. Commun. – volume: 22 start-page: 119 year: 2020 end-page: 135 ident: bb0015 article-title: GWAS: fast-forwarding gene identification and characterization in temperate cereals: lessons from barley–a review publication-title: J. Adv. Res. – year: 2008 ident: bb0110 article-title: Identification of a QTL on chromosome 7AS for sodium exclusion in bread wheat publication-title: 11th International Wheat Genetics Symposium Proceedings – volume: 12 year: 2017 ident: bb0140 article-title: QTL mapping for nine drought-responsive agronomic traits in bread wheat under irrigated and rain-fed environments publication-title: PLoS One – volume: 120 start-page: 208 year: 2018 end-page: 218 ident: bb0415 article-title: pKWmEB: integration of Kruskal–Wallis test with empirical Bayes under polygenic background control for multi-locus genome-wide association study publication-title: Heredity – year: 2020 ident: bb0045 article-title: Genome-wide association study for spot blotch resistance in afghan wheat germplasm publication-title: Plant Pathol. – volume: 11 start-page: 34 year: 2011 ident: bb0430 article-title: Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice ( publication-title: BMC Plant Biol. – volume: 41 start-page: 919 year: 2018 end-page: 935 ident: bb0355 article-title: Allelic variations and differential expressions detected at quantitative trait loci for salt stress tolerance in wheat publication-title: Plant Cell Environ. – volume: 28 start-page: 13 year: 1992 end-page: 16 ident: bb0130 article-title: Effective selection criteria for assessing plant stress tolerance publication-title: Crop Sci. – volume: 39 start-page: 581 year: 2017 end-page: 591 ident: bb0500 article-title: Transcriptome analysis reveals sunflower cytochrome P450 CYP93A1 responses to high salinity treatment at the seedling stage publication-title: Gene Genom. – volume: 112 start-page: 4608 year: 2020 end-page: 4621 ident: bb0065 article-title: Multi-locus genome-wide association studies reveal novel genomic regions associated with vegetative stage salt tolerance in bread wheat ( publication-title: Genomics – volume: 9 start-page: 1464 year: 2018 ident: bb0080 article-title: The application of multi-locus GWAS for the detection of salt-tolerance loci in rice publication-title: Front. Plant Sci. – volume: 61 start-page: 222 year: 2010 end-page: 229 ident: bb0400 article-title: Molecular diversity and genetic structure of modern and traditional landrace cultivars of wheat ( publication-title: Crop Pasture Sci. – volume: 23 start-page: 1647 year: 2004 end-page: 1656 ident: bb0250 article-title: The publication-title: EMBO J. – start-page: 3 year: 2002 end-page: 20 ident: bb0370 article-title: Global impact of salinity and agricultural ecosystems publication-title: Salinity: Environment – Plants – Molecules – volume: 91 start-page: 503 year: 2003 end-page: 527 ident: bb0470 article-title: Na publication-title: Ann. Bot. – volume: 20 start-page: 618 year: 2019 ident: bb0225 article-title: Estimation of a significance threshold for genome-wide association studies publication-title: BMC Genomics – year: 2021 ident: bb0510 article-title: R package "corrplot": Visualization of a Correlation Matrix – volume: 6 start-page: 797 year: 2015 ident: bb0270 article-title: OsCYP21-4, a novel Golgi-resident cyclophilin, increases oxidative stress tolerance in rice publication-title: Front. Plant Sci. – volume: 118 start-page: 517 year: 2017 end-page: 524 ident: bb0540 article-title: pLARmEB: integration of least angle regression with empirical Bayes for multilocus genome-wide association studies publication-title: Heredity – volume: 18 start-page: 333 year: 2015 end-page: 340 ident: bb0190 article-title: Evaluation of wheat genotypes for salt tolerance based on some physiological traits publication-title: J. Crop. Sci. Biotechnol. – volume: 30 start-page: 360 year: 2012 end-page: 364 ident: bb0330 article-title: Wheat grain yield on saline soils is improved by an ancestral Na+ transporter gene publication-title: Nat. Biotechnol. – volume: 12 start-page: 88 year: 2019 ident: bb0280 article-title: Identification of genes for salt tolerance and yield-related traits in rice plants grown hydroponically and under saline field conditions by genome-wide association study publication-title: Rice – volume: 63 start-page: 2541 year: 2012 end-page: 2556 ident: bb0525 article-title: A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice publication-title: J. Exp. Bot. – volume: 88 start-page: 1624 year: 2018 end-page: 1632 ident: bb0245 article-title: Impact of water deficit (salt and drought) stress on physiological, biochemical and yield attributes on wheat ( publication-title: Indian J. Agric. Sci. – volume: 215 start-page: 210 year: 2019 ident: bb0090 article-title: QTL mapping for salt tolerance associated traits in wheat ( publication-title: Euphytica – volume: 15 start-page: 953 year: 2017 end-page: 969 ident: bb0460 article-title: Genome-wide association study for 13 agronomic traits reveals distribution of superior alleles in bread wheat from the yellow and Huai Valley of China publication-title: Plant Biotechnol. J. – volume: 19 start-page: 647 year: 2018 ident: bb0235 article-title: Mechanisms of sodium transport in plants—progresses and challenges publication-title: Int. J. Mol. Sci. – volume: 41 start-page: 633 year: 2009 end-page: 638 ident: bb0240 article-title: Role of proline, K/Na ratio and chlorophyll content in salt tolerance of wheat ( publication-title: Pak. J. Bot. – volume: 13 year: 2018 ident: bb0365 article-title: Grain number and grain yield distribution along the spike remain stable despite breeding for high yield in winter wheat publication-title: PLoS One – year: 2014 ident: bb0185 article-title: Hmisc: A Package of Miscellaneous R Functions – volume: 3 start-page: 148 year: 2010 end-page: 160 ident: bb0475 article-title: Characterizing the Saltol quantitative trait locus for salinity tolerance in rice publication-title: Rice – volume: 18 start-page: 249 year: 2018 ident: bb0450 article-title: Identification, analysis and development of salt responsive candidate gene based SSR markers in wheat publication-title: BMC Plant Biol. – year: 2014 ident: bb0360 article-title: Biometrics and Breeding Informatics, PBGB Division – volume: 11 start-page: 572975 year: 2020 ident: bb0375 article-title: Identification of QTLs/defense genes effective at seedling stage against prevailing races of wheat stripe rust in India publication-title: Front. Genet. – year: 2016 ident: bb0410 article-title: A Language and Environment for Statistical Computing – volume: 92 start-page: 448 year: 1996 end-page: 454 ident: bb0105 article-title: Mapping of the K+/Na+ discrimination locus Kna1 in wheat publication-title: Theor. Appl. Genet. – volume: 33 start-page: 102 year: 2015 end-page: 120 ident: bb0040 article-title: QTL mapping of yield and yield components under normal and salt-stress conditions in bread wheat ( publication-title: Plant Mol. Biol. Report. – volume: 5 start-page: 175 year: 2017 end-page: 184 ident: bb0535 article-title: Genetic mapping of quantitative trait loci in crops publication-title: Crop J. – volume: 132 start-page: 4107 year: 2005 end-page: 4118 ident: bb0340 article-title: Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation publication-title: Development – volume: 12 start-page: 1137 year: 2003 end-page: 1151 ident: bb0305 article-title: Genetics of drought adaptation in publication-title: Mol. Ecol. – volume: 15 start-page: 390 year: 2017 end-page: 401 ident: bb0010 article-title: Characterization of a Wheat Breeders’ Array suitable for high throughput SNP genotyping of global accessions of hexaploid bread wheat ( publication-title: Plant Biotechnol. J. – volume: 131 start-page: 2179 year: 2018 end-page: 2196 ident: bb0030 article-title: Mapping of novel salt tolerance QTL in an Excalibur× Kukri doubled haploid wheat population publication-title: Theor. Appl. Genet. – volume: 8 start-page: 1 year: 2015 end-page: 3 ident: bb0485 article-title: Subgenomic diversity patterns caused by directional selection in bread wheat gene pools publication-title: Plant Genom. – volume: 2 start-page: 370 year: 2001 end-page: 381 ident: bb0295 article-title: Mapping quantitative trait loci in plants: uses and caveats for evolutionary biology publication-title: Nat. Rev. Genet. – volume: 25 start-page: 1 year: 2008 end-page: 18 ident: bb0260 article-title: FactoMineR: a package for multivariate analysis publication-title: J. Stat. Softw. – volume: 12 start-page: 13 year: 1990 end-page: 15 ident: bb0100 article-title: Isolation of plant DNA from fresh tissue publication-title: Focus – volume: 21 start-page: 27 year: 2021 ident: bb0195 article-title: Genome-wide association study of yield and related traits in common wheat under salt-stress conditions publication-title: BMC Plant Biol. – volume: 23 start-page: 57 year: 2018 end-page: 64 ident: bb0490 article-title: Phenotyping and microsatellite marker analysis of HD 2851 (salt sensitive) × Kharchia 65 (salt tolerant) F2 population for salinity tolerance publication-title: Indian J. Plant Physiol. – volume: 59 start-page: 651 year: 2008 end-page: 681 ident: bb0320 article-title: Mechanisms of salinity tolerance publication-title: Annu. Rev. Plant Biol. – volume: 9 start-page: 734 year: 2018 ident: bb0005 article-title: Abiotic stress signaling in wheat–an inclusive overview of hormonal interactions during abiotic stress responses in wheat publication-title: Front. Plant Sci. – volume: 11 start-page: 549743 year: 2020 ident: bb0255 article-title: Genome-wide association study reveals genomic regions associated with ten agronomical traits in wheat under late-sown conditions publication-title: Front. Plant Sci. – volume: 14 start-page: 2611 year: 2005 end-page: 2620 ident: bb0115 article-title: Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study publication-title: Mol. Ecol. – volume: 57 start-page: 1025 year: 2006 end-page: 1043 ident: bb0315 article-title: Approaches to increasing the salt tolerance of wheat and other cereals publication-title: J. Exp. Bot. – volume: 4 start-page: 2669 year: 2011 end-page: 2681 ident: bb0520 article-title: The global technical and economic potential of bioenergy from salt-affected soils publication-title: Energy Environ. Sc – start-page: 341784 year: 2018 ident: bb0545 article-title: A fast mrMLM algorithm for multi-locus genome-wide association studies publication-title: bioRxiv – volume: 153 start-page: 109 year: 2007 end-page: 117 ident: bb0290 article-title: Genetic analysis of salt tolerance in a recombinant inbred population of wheat ( publication-title: Euphytica – volume: 110 start-page: 865 year: 2005 end-page: 880 ident: bb0385 article-title: A high-density genetic map of hexaploid wheat ( publication-title: Theor. Appl. Genet. – volume: 142 start-page: 1537 year: 2006 end-page: 1547 ident: bb0210 article-title: Physiological characterization of two genes for Na+ exclusion in durum wheat, Nax1 and Nax2 publication-title: Plant Physiol. – year: 2008 ident: bb0345 article-title: Mapping Quantitative Trait Loci Associated with Salinity Tolerance in Synthetic Derived Backcrossed Bread Lines – volume: 4 start-page: 136 year: 2012 ident: bb0435 article-title: Improving the nutritional quality and health benefits of wheat publication-title: Qual. Assur. Saf. Crop. Foods – year: 2015 ident: bb0145 article-title: Dendextend: an R package for visualizing, adjusting, and comparing trees of hierarchical clustering publication-title: Bioinformatics – volume: 137 start-page: 807 year: 2005 end-page: 818 ident: bb0085 article-title: Control of sodium transport in durum wheat publication-title: Plant Physiol. – year: 2014 ident: bb0170 article-title: Mechanism of salinity tolerance in plants: physiological, biochemical, and molecular characterization publication-title: Int. J. Genom. – volume: 33 start-page: 331 year: 2014 end-page: 349 ident: bb0120 article-title: Drought stress in wheat during flowering and grain-filling periods publication-title: CRC Crit. Rev. Plant Sci. – volume: 20 start-page: 586 year: 2015 end-page: 594 ident: bb0220 article-title: Tuning plant signaling and growth to survive salt publication-title: Trends Plant Sci. – volume: 19 start-page: 168 year: 2019 ident: bb0275 article-title: Genetic architecture of grain yield in bread wheat based on genome-wide association studies publication-title: BMC Plant Biol. – volume: 144 start-page: 619 year: 2021 end-page: 639 ident: bib546 article-title: Morpho-physiological and gene expression responses of wheat by publication-title: Plant Cell Tiss. Organ. Cult. – volume: 33 start-page: 2030 year: 2015 end-page: 2040 ident: bb0335 article-title: Analysis of quantitative trait loci (QTL) for grain yield and agronomic traits in wheat ( publication-title: Biol. Reprod. – year: 2018 ident: bb0425 article-title: ACBD-R. Augmented Complete Block Design with R for Windows. CIMMYT; El Batan, Mexico, Version 4.0 – volume: 19 start-page: 700 year: 2018 end-page: 712 ident: bb0515 article-title: Methodological implementation of mixed linear models in multi-locus genome-wide association studies publication-title: Brief. Bioinform. – volume: 42 start-page: 147 year: 1995 end-page: 156 ident: bb0200 article-title: Field evaluation to salinity stress in Iranian hexaploid wheat landrace accessions publication-title: Genet. Resour. Crop. Evol. – volume: 7 start-page: 15662 year: 2017 ident: bib548 article-title: Mapping QTLs conferring salt tolerance and micronutrient concentrations at seedling stage in wheat publication-title: Sci. Rep. – volume: 10 start-page: 14034 year: 2020 ident: bb0050 article-title: Detection of genomic regions associated with tiller number in Iranian bread wheat under different water regimes using genome-wide association study publication-title: Sci. Rep. – volume: 9 start-page: 3156 year: 2020 ident: bb0440 article-title: Molecular markers associated with agro-physiological traits under terminal drought conditions in bread wheat publication-title: Int. J. Mol. Sci. – volume: 6 start-page: 181 year: 2018 end-page: 190 ident: bb0180 article-title: Function of the auxin-responsive gene TaSAUR75 under salt and drought stress publication-title: Crop J. – volume: 32 start-page: 39 year: 2013 end-page: 59 ident: bb0155 article-title: Quantitative trait loci for agronomic and physiological traits for a bread wheat population grown in environments with a range of salinity levels publication-title: Mol. Breed. – volume: 13 year: 2017 ident: bb0465 article-title: Iterative sure independence screening EM-Bayesian LASSO algorithm for multilocus genome-wide association studies publication-title: PLoS Comput. Biol. – volume: 202 start-page: 472 year: 2016 end-page: 485 ident: bb0350 article-title: Identification and characterization of salt tolerance of wheat germplasm using a multivariable screening approach publication-title: J. Agron. Crop Sci. – volume: 21 start-page: 3674 year: 2005 end-page: 3676 ident: bb0070 article-title: Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research publication-title: Bioinformatics – volume: 208 start-page: 668 year: 2015 end-page: 673 ident: bb0325 article-title: Salinity tolerance of crops – what is the cost? publication-title: New Phytol. – volume: 8 start-page: 509 year: 2017 ident: bb0035 article-title: The role of Na+ and K+ transporters in salt stress adaptation in glycophytes publication-title: Front. Physiol. – volume: 18 start-page: 791 year: 2020 end-page: 804 ident: bb0495 article-title: TaCYP 81D5, one member in a wheat cytochrome P450 gene cluster, confers salinity tolerance via reactive oxygen species scavenging publication-title: Plant Bioethanol. J. – volume: 67 start-page: 170 year: 2000 end-page: 181 ident: bb0380 article-title: Association mapping in structured populations publication-title: Am. J. Hum. Genet. – volume: 20 start-page: 196 year: 2020 ident: bb0285 article-title: Genetic mapping and genomic selection for maize stalk strength publication-title: BMC Plant Biol. – start-page: 29 year: 1975 end-page: 35 ident: bb0125 article-title: On augmented designs publication-title: Biometrics – volume: 42 start-page: 351 year: 2002 end-page: 361 ident: bb0420 article-title: Transient salinity and subsoil constraints to dryland farming in Australian sodic soils: an overview publication-title: Aust. J. Exp. Agr. – volume: 181 start-page: 371 year: 2011 end-page: 383 ident: bb0095 article-title: Quantitative trait loci associated with salinity tolerance in field grown bread wheat publication-title: Euphytica – volume: 10 start-page: 1280 year: 2019 ident: bb0160 article-title: Bread wheat with high salinity and sodicity tolerance publication-title: Front. Plant Sci. – volume: 51 start-page: 1530 year: 2019 end-page: 1539 ident: bb0215 article-title: Improving grain yield, stress resilience and quality of bread wheat using large-scale genomics publication-title: Nat. Genet. – volume: 96 start-page: 455 year: 2005 end-page: 4559 ident: bb0055 article-title: The transfer and history of “reduced height genes”(Rht) in wheat from Japan to Europe publication-title: J. Hered. – volume: 44 start-page: 404 year: 2016 end-page: 413 ident: bb0405 article-title: Expression of genes related to Na publication-title: Cereal Res. Commun. – volume: 6 start-page: 19444 year: 2016 ident: bb0505 article-title: Improving power and accuracy of genome-wide association studies via a multi-locus mixed linear model methodology publication-title: Sci. Rep. – volume: 23 start-page: 57 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0490 article-title: Phenotyping and microsatellite marker analysis of HD 2851 (salt sensitive) × Kharchia 65 (salt tolerant) F2 population for salinity tolerance publication-title: Indian J. Plant Physiol. doi: 10.1007/s40502-017-0319-7 – volume: 142 start-page: 1537 year: 2006 ident: 10.1016/j.ygeno.2021.07.014_bb0210 article-title: Physiological characterization of two genes for Na+ exclusion in durum wheat, Nax1 and Nax2 publication-title: Plant Physiol. doi: 10.1104/pp.106.086538 – volume: 15 start-page: 390 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0010 article-title: Characterization of a Wheat Breeders’ Array suitable for high throughput SNP genotyping of global accessions of hexaploid bread wheat (Triticum aestivum) publication-title: Plant Biotechnol. J. doi: 10.1111/pbi.12635 – volume: 131 start-page: 2179 issue: 10 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0030 article-title: Mapping of novel salt tolerance QTL in an Excalibur× Kukri doubled haploid wheat population publication-title: Theor. Appl. Genet. doi: 10.1007/s00122-018-3146-y – volume: 23 start-page: 1647 issue: 7 year: 2004 ident: 10.1016/j.ygeno.2021.07.014_bb0250 article-title: The Arabidopsis cytochrome P450 CYP707A encodes ABA 8′-hydroxylases: key enzymes in ABA catabolism publication-title: EMBO J. doi: 10.1038/sj.emboj.7600121 – volume: 28 start-page: 13 year: 1992 ident: 10.1016/j.ygeno.2021.07.014_bb0130 article-title: Effective selection criteria for assessing plant stress tolerance publication-title: Crop Sci. – volume: 12 start-page: 1137 issue: 5 year: 2003 ident: 10.1016/j.ygeno.2021.07.014_bb0305 article-title: Genetics of drought adaptation in Arabidopsis thaliana: I. Pleiotropy contributes to genetic correlations among ecological traits publication-title: Mol. Ecol. doi: 10.1046/j.1365-294X.2003.01833.x – volume: 215 start-page: 210 issue: 12 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0090 article-title: QTL mapping for salt tolerance associated traits in wheat (Triticum aestivum L.) publication-title: Euphytica doi: 10.1007/s10681-019-2533-z – volume: 126 start-page: 2335 year: 2013 ident: 10.1016/j.ygeno.2021.07.014_bib547 article-title: Association mapping of salt tolerance in barley (Hordeum vulgare L.) publication-title: Theor. Appl. Genet. doi: 10.1007/s00122-013-2139-0 – volume: 110 start-page: 865 year: 2005 ident: 10.1016/j.ygeno.2021.07.014_bb0385 article-title: A high-density genetic map of hexaploid wheat (Triticum aestivum L.) from the cross Chinese spring × SQ1 and its use to compare QTLs for grain yield across a range of environments publication-title: Theor. Appl. Genet. doi: 10.1007/s00122-004-1902-7 – volume: 7 start-page: 15662 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bib548 article-title: Mapping QTLs conferring salt tolerance and micronutrient concentrations at seedling stage in wheat publication-title: Sci. Rep. doi: 10.1038/s41598-017-15726-6 – volume: 59 start-page: 651 year: 2008 ident: 10.1016/j.ygeno.2021.07.014_bb0320 article-title: Mechanisms of salinity tolerance publication-title: Annu. Rev. Plant Biol. doi: 10.1146/annurev.arplant.59.032607.092911 – volume: 118 start-page: 517 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0540 article-title: pLARmEB: integration of least angle regression with empirical Bayes for multilocus genome-wide association studies publication-title: Heredity doi: 10.1038/hdy.2017.8 – volume: 18 start-page: 791 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0495 article-title: TaCYP 81D5, one member in a wheat cytochrome P450 gene cluster, confers salinity tolerance via reactive oxygen species scavenging publication-title: Plant Bioethanol. J. – volume: 41 start-page: 919 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0355 article-title: Allelic variations and differential expressions detected at quantitative trait loci for salt stress tolerance in wheat publication-title: Plant Cell Environ. doi: 10.1111/pce.12898 – volume: 21 start-page: 3674 year: 2005 ident: 10.1016/j.ygeno.2021.07.014_bb0070 article-title: Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research publication-title: Bioinformatics doi: 10.1093/bioinformatics/bti610 – volume: 153 start-page: 109 year: 2007 ident: 10.1016/j.ygeno.2021.07.014_bb0290 article-title: Genetic analysis of salt tolerance in a recombinant inbred population of wheat (Triticum aestivum L.) publication-title: Euphytica doi: 10.1007/s10681-006-9247-8 – volume: 13 issue: 10 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0365 article-title: Grain number and grain yield distribution along the spike remain stable despite breeding for high yield in winter wheat publication-title: PLoS One doi: 10.1371/journal.pone.0205452 – year: 2014 ident: 10.1016/j.ygeno.2021.07.014_bb0170 article-title: Mechanism of salinity tolerance in plants: physiological, biochemical, and molecular characterization publication-title: Int. J. Genom. doi: 10.1155/2014/701596 – volume: 121 start-page: 877 year: 2010 ident: 10.1016/j.ygeno.2021.07.014_bb0150 article-title: Sodium exclusion QTL associated with improved seedling growth in bread wheat under salinity stress publication-title: Theor. Appl. Genet. doi: 10.1007/s00122-010-1357-y – year: 2014 ident: 10.1016/j.ygeno.2021.07.014_bb0360 – volume: 39 start-page: 581 issue: 6 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0500 article-title: Transcriptome analysis reveals sunflower cytochrome P450 CYP93A1 responses to high salinity treatment at the seedling stage publication-title: Gene Genom. doi: 10.1007/s13258-017-0523-x – volume: 8 issue: 9 year: 2013 ident: 10.1016/j.ygeno.2021.07.014_bb0020 article-title: New insights into the role of Arabidopsis RABA1 GTPases in salinity stress tolerance publication-title: Plant Signal. Behav. doi: 10.4161/psb.25377 – year: 2015 ident: 10.1016/j.ygeno.2021.07.014_bb0145 article-title: Dendextend: an R package for visualizing, adjusting, and comparing trees of hierarchical clustering publication-title: Bioinformatics doi: 10.1093/bioinformatics/btv428 – volume: 61 start-page: 222 year: 2010 ident: 10.1016/j.ygeno.2021.07.014_bb0400 article-title: Molecular diversity and genetic structure of modern and traditional landrace cultivars of wheat (Triticum aestivum L.) publication-title: Crop Pasture Sci. doi: 10.1071/CP09093 – volume: 147 start-page: 469 issue: 2 year: 2008 ident: 10.1016/j.ygeno.2021.07.014_bb0075 article-title: Quantitative trait loci and crop performance under abiotic stress: where do we stand? publication-title: Plant Physiol. doi: 10.1104/pp.108.118117 – volume: 20 start-page: 586 year: 2015 ident: 10.1016/j.ygeno.2021.07.014_bb0220 article-title: Tuning plant signaling and growth to survive salt publication-title: Trends Plant Sci. doi: 10.1016/j.tplants.2015.06.008 – year: 1955 ident: 10.1016/j.ygeno.2021.07.014_bb0480 – volume: 20 start-page: 196 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0285 article-title: Genetic mapping and genomic selection for maize stalk strength publication-title: BMC Plant Biol. doi: 10.1186/s12870-020-2270-4 – volume: 18 start-page: 249 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0450 article-title: Identification, analysis and development of salt responsive candidate gene based SSR markers in wheat publication-title: BMC Plant Biol. doi: 10.1186/s12870-018-1476-1 – volume: 14 start-page: 2611 year: 2005 ident: 10.1016/j.ygeno.2021.07.014_bb0115 article-title: Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study publication-title: Mol. Ecol. doi: 10.1111/j.1365-294X.2005.02553.x – volume: 9 start-page: 734 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0005 article-title: Abiotic stress signaling in wheat–an inclusive overview of hormonal interactions during abiotic stress responses in wheat publication-title: Front. Plant Sci. doi: 10.3389/fpls.2018.00734 – volume: 19 start-page: 647 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0235 article-title: Mechanisms of sodium transport in plants—progresses and challenges publication-title: Int. J. Mol. Sci. doi: 10.3390/ijms19030647 – volume: 120 start-page: 208 issue: 3 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0415 article-title: pKWmEB: integration of Kruskal–Wallis test with empirical Bayes under polygenic background control for multi-locus genome-wide association study publication-title: Heredity doi: 10.1038/s41437-017-0007-4 – ident: 10.1016/j.ygeno.2021.07.014_bb0510 – volume: 8 start-page: 509 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0035 article-title: The role of Na+ and K+ transporters in salt stress adaptation in glycophytes publication-title: Front. Physiol. doi: 10.3389/fphys.2017.00509 – volume: 3 start-page: 148 year: 2010 ident: 10.1016/j.ygeno.2021.07.014_bb0475 article-title: Characterizing the Saltol quantitative trait locus for salinity tolerance in rice publication-title: Rice doi: 10.1007/s12284-010-9053-8 – volume: 11 start-page: 572975 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0375 article-title: Identification of QTLs/defense genes effective at seedling stage against prevailing races of wheat stripe rust in India publication-title: Front. Genet. doi: 10.3389/fgene.2020.572975 – year: 2016 ident: 10.1016/j.ygeno.2021.07.014_bb0410 – volume: 6 start-page: 19444 year: 2016 ident: 10.1016/j.ygeno.2021.07.014_bb0505 article-title: Improving power and accuracy of genome-wide association studies via a multi-locus mixed linear model methodology publication-title: Sci. Rep. doi: 10.1038/srep19444 – volume: 30 start-page: 360 issue: 4 year: 2012 ident: 10.1016/j.ygeno.2021.07.014_bb0330 article-title: Wheat grain yield on saline soils is improved by an ancestral Na+ transporter gene publication-title: Nat. Biotechnol. doi: 10.1038/nbt.2120 – volume: 67 start-page: 170 year: 2000 ident: 10.1016/j.ygeno.2021.07.014_bb0380 article-title: Association mapping in structured populations publication-title: Am. J. Hum. Genet. doi: 10.1086/302959 – volume: 8 start-page: 1 issue: 2 year: 2015 ident: 10.1016/j.ygeno.2021.07.014_bb0485 article-title: Subgenomic diversity patterns caused by directional selection in bread wheat gene pools publication-title: Plant Genom. doi: 10.3835/plantgenome2015.03.0013 – volume: 15 start-page: 953 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0460 article-title: Genome-wide association study for 13 agronomic traits reveals distribution of superior alleles in bread wheat from the yellow and Huai Valley of China publication-title: Plant Biotechnol. J. doi: 10.1111/pbi.12690 – volume: 6 start-page: 797 year: 2015 ident: 10.1016/j.ygeno.2021.07.014_bb0270 article-title: OsCYP21-4, a novel Golgi-resident cyclophilin, increases oxidative stress tolerance in rice publication-title: Front. Plant Sci. doi: 10.3389/fpls.2015.00797 – volume: 41 start-page: 633 issue: 2 year: 2009 ident: 10.1016/j.ygeno.2021.07.014_bb0240 article-title: Role of proline, K/Na ratio and chlorophyll content in salt tolerance of wheat (Triticum aestivum L.) publication-title: Pak. J. Bot. – volume: 21 start-page: 27 year: 2021 ident: 10.1016/j.ygeno.2021.07.014_bb0195 article-title: Genome-wide association study of yield and related traits in common wheat under salt-stress conditions publication-title: BMC Plant Biol. doi: 10.1186/s12870-020-02799-1 – volume: 208 start-page: 668 year: 2015 ident: 10.1016/j.ygeno.2021.07.014_bb0325 article-title: Salinity tolerance of crops – what is the cost? publication-title: New Phytol. doi: 10.1111/nph.13519 – volume: 33 start-page: 102 issue: 1 year: 2015 ident: 10.1016/j.ygeno.2021.07.014_bb0040 article-title: QTL mapping of yield and yield components under normal and salt-stress conditions in bread wheat (Triticum aestivum L.) publication-title: Plant Mol. Biol. Report. doi: 10.1007/s11105-014-0726-0 – volume: 11 start-page: 549743 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0255 article-title: Genome-wide association study reveals genomic regions associated with ten agronomical traits in wheat under late-sown conditions publication-title: Front. Plant Sci. doi: 10.3389/fpls.2020.549743 – volume: 32 start-page: 39 year: 2013 ident: 10.1016/j.ygeno.2021.07.014_bb0155 article-title: Quantitative trait loci for agronomic and physiological traits for a bread wheat population grown in environments with a range of salinity levels publication-title: Mol. Breed. doi: 10.1007/s11032-013-9851-y – volume: 92 start-page: 448 year: 1996 ident: 10.1016/j.ygeno.2021.07.014_bb0105 article-title: Mapping of the K+/Na+ discrimination locus Kna1 in wheat publication-title: Theor. Appl. Genet. doi: 10.1007/BF00223692 – volume: 96 start-page: 455 issue: 4 year: 2005 ident: 10.1016/j.ygeno.2021.07.014_bb0055 article-title: The transfer and history of “reduced height genes”(Rht) in wheat from Japan to Europe publication-title: J. Hered. doi: 10.1093/jhered/esi060 – start-page: 3 year: 2002 ident: 10.1016/j.ygeno.2021.07.014_bb0370 article-title: Global impact of salinity and agricultural ecosystems – volume: 300 start-page: 110624 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0455 article-title: TaMYB86B encodes a R2R3-type MYB transcription factor and enhances salt tolerance in wheat publication-title: Plant Sci. doi: 10.1016/j.plantsci.2020.110624 – ident: 10.1016/j.ygeno.2021.07.014_bb0185 – year: 2008 ident: 10.1016/j.ygeno.2021.07.014_bb0345 – volume: 19 start-page: 700 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0515 article-title: Methodological implementation of mixed linear models in multi-locus genome-wide association studies publication-title: Brief. Bioinform. doi: 10.1093/bib/bbw145 – volume: 9 start-page: 1464 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0080 article-title: The application of multi-locus GWAS for the detection of salt-tolerance loci in rice publication-title: Front. Plant Sci. doi: 10.3389/fpls.2018.01464 – year: 2008 ident: 10.1016/j.ygeno.2021.07.014_bb0110 article-title: Identification of a QTL on chromosome 7AS for sodium exclusion in bread wheat – volume: 112 start-page: 4608 issue: 6 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0065 article-title: Multi-locus genome-wide association studies reveal novel genomic regions associated with vegetative stage salt tolerance in bread wheat (Triticum aestivum L.) publication-title: Genomics doi: 10.1016/j.ygeno.2020.08.006 – volume: 137 start-page: 807 year: 2005 ident: 10.1016/j.ygeno.2021.07.014_bb0085 article-title: Control of sodium transport in durum wheat publication-title: Plant Physiol. doi: 10.1104/pp.104.057307 – volume: 5 start-page: 175 issue: 2 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0535 article-title: Genetic mapping of quantitative trait loci in crops publication-title: Crop J. doi: 10.1016/j.cj.2016.06.003 – volume: 27 start-page: 341 issue: 1 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bib549 article-title: Quantitative trait loci (QTL) mapping for physiological and biochemical attributes in a Pasban90/Frontana recombinant inbred lines (RILs) population of wheat (Triticum aestivum) under salt stress condition publication-title: Saudi J. Biol. Sci. doi: 10.1016/j.sjbs.2019.10.003 – volume: 2 start-page: 370 issue: 5 year: 2001 ident: 10.1016/j.ygeno.2021.07.014_bb0295 article-title: Mapping quantitative trait loci in plants: uses and caveats for evolutionary biology publication-title: Nat. Rev. Genet. doi: 10.1038/35072085 – volume: 12 start-page: 13 year: 1990 ident: 10.1016/j.ygeno.2021.07.014_bb0100 article-title: Isolation of plant DNA from fresh tissue publication-title: Focus – volume: 9 start-page: 3156 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0440 article-title: Molecular markers associated with agro-physiological traits under terminal drought conditions in bread wheat publication-title: Int. J. Mol. Sci. doi: 10.3390/ijms21093156 – volume: 12 start-page: 88 issue: 1 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0280 article-title: Identification of genes for salt tolerance and yield-related traits in rice plants grown hydroponically and under saline field conditions by genome-wide association study publication-title: Rice doi: 10.1186/s12284-019-0349-z – volume: 132 start-page: 4107 issue: 18 year: 2005 ident: 10.1016/j.ygeno.2021.07.014_bb0340 article-title: Auxin response factors ARF6 and ARF8 promote jasmonic acid production and flower maturation publication-title: Development doi: 10.1242/dev.01955 – volume: 44 start-page: 404 year: 2016 ident: 10.1016/j.ygeno.2021.07.014_bb0405 article-title: Expression of genes related to Na+ exclusion and proline accumulation in tolerant and susceptible wheat genotypes under salt stress publication-title: Cereal Res. Commun. doi: 10.1556/0806.44.2016.009 – volume: 4 start-page: 2669 year: 2011 ident: 10.1016/j.ygeno.2021.07.014_bb0520 article-title: The global technical and economic potential of bioenergy from salt-affected soils publication-title: Energy Environ. Sci. doi: 10.1039/C1EE01029H – year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0425 – volume: 202 start-page: 472 year: 2016 ident: 10.1016/j.ygeno.2021.07.014_bb0350 article-title: Identification and characterization of salt tolerance of wheat germplasm using a multivariable screening approach publication-title: J. Agron. Crop Sci. doi: 10.1111/jac.12178 – volume: 91 start-page: 503 year: 2003 ident: 10.1016/j.ygeno.2021.07.014_bb0470 article-title: Na+ tolerance and Na+ transport in higher plants publication-title: Ann. Bot. doi: 10.1093/aob/mcg058 – volume: 63 start-page: 2541 issue: 7 year: 2012 ident: 10.1016/j.ygeno.2021.07.014_bb0525 article-title: A R2R3-type MYB gene, OsMYB2, is involved in salt, cold, and dehydration tolerance in rice publication-title: J. Exp. Bot. doi: 10.1093/jxb/err431 – year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0445 article-title: Genomics technologies for improving salt tolerance in wheat – volume: 42 start-page: 147 year: 1995 ident: 10.1016/j.ygeno.2021.07.014_bb0200 article-title: Field evaluation to salinity stress in Iranian hexaploid wheat landrace accessions publication-title: Genet. Resour. Crop. Evol. doi: 10.1007/BF02539518 – volume: 57 start-page: 1025 issue: 5 year: 2006 ident: 10.1016/j.ygeno.2021.07.014_bb0315 article-title: Approaches to increasing the salt tolerance of wheat and other cereals publication-title: J. Exp. Bot. doi: 10.1093/jxb/erj100 – volume: 144 start-page: 619 year: 2021 ident: 10.1016/j.ygeno.2021.07.014_bib546 article-title: Morpho-physiological and gene expression responses of wheat by Aegilops cylindrica amphidiploids to salt stress publication-title: Plant Cell Tiss. Organ. Cult. – volume: 51 start-page: 1530 issue: 10 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0215 article-title: Improving grain yield, stress resilience and quality of bread wheat using large-scale genomics publication-title: Nat. Genet. doi: 10.1038/s41588-019-0496-6 – volume: 13 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0465 article-title: Iterative sure independence screening EM-Bayesian LASSO algorithm for multilocus genome-wide association studies publication-title: PLoS Comput. Biol. doi: 10.1371/journal.pcbi.1005357 – volume: 33 start-page: 331 year: 2014 ident: 10.1016/j.ygeno.2021.07.014_bb0120 article-title: Drought stress in wheat during flowering and grain-filling periods publication-title: CRC Crit. Rev. Plant Sci. doi: 10.1080/07352689.2014.875291 – volume: 22 start-page: 119 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0015 article-title: GWAS: fast-forwarding gene identification and characterization in temperate cereals: lessons from barley–a review publication-title: J. Adv. Res. doi: 10.1016/j.jare.2019.10.013 – volume: 10 start-page: 14034 year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0050 article-title: Detection of genomic regions associated with tiller number in Iranian bread wheat under different water regimes using genome-wide association study publication-title: Sci. Rep. doi: 10.1038/s41598-020-69442-9 – volume: 18 start-page: 333 issue: 5 year: 2015 ident: 10.1016/j.ygeno.2021.07.014_bb0190 article-title: Evaluation of wheat genotypes for salt tolerance based on some physiological traits publication-title: J. Crop. Sci. Biotechnol. doi: 10.1007/s12892-015-0064-2 – volume: 181 start-page: 371 year: 2011 ident: 10.1016/j.ygeno.2021.07.014_bb0095 article-title: Quantitative trait loci associated with salinity tolerance in field grown bread wheat publication-title: Euphytica doi: 10.1007/s10681-011-0463-5 – volume: 14 issue: 3 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0390 article-title: Genome-wide association analyses for yield and yield-related traits in bread wheat (Triticum aestivum L.) under pre-anthesis combined heat and drought stress in field conditions publication-title: PLoS One doi: 10.1371/journal.pone.0213407 – year: 2020 ident: 10.1016/j.ygeno.2021.07.014_bb0045 article-title: Genome-wide association study for spot blotch resistance in afghan wheat germplasm publication-title: Plant Pathol. doi: 10.1111/ppa.13191 – volume: 42 start-page: 351 year: 2002 ident: 10.1016/j.ygeno.2021.07.014_bb0420 article-title: Transient salinity and subsoil constraints to dryland farming in Australian sodic soils: an overview publication-title: Aust. J. Exp. Agr. doi: 10.1071/EA01111 – volume: 19 start-page: 168 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0275 article-title: Genetic architecture of grain yield in bread wheat based on genome-wide association studies publication-title: BMC Plant Biol. doi: 10.1186/s12870-019-1781-3 – start-page: 29 year: 1975 ident: 10.1016/j.ygeno.2021.07.014_bb0125 article-title: On augmented designs publication-title: Biometrics doi: 10.2307/2529707 – volume: 25 start-page: 1 year: 2008 ident: 10.1016/j.ygeno.2021.07.014_bb0260 article-title: FactoMineR: a package for multivariate analysis publication-title: J. Stat. Softw. doi: 10.18637/jss.v025.i01 – volume: 10 start-page: 1280 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0160 article-title: Bread wheat with high salinity and sodicity tolerance publication-title: Front. Plant Sci. doi: 10.3389/fpls.2019.01280 – volume: 88 start-page: 1624 issue: 10 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0245 article-title: Impact of water deficit (salt and drought) stress on physiological, biochemical and yield attributes on wheat (Triticum aestivum) varieties publication-title: Indian J. Agric. Sci. doi: 10.56093/ijas.v88i10.84255 – volume: 11 start-page: 34 issue: 1 year: 2011 ident: 10.1016/j.ygeno.2021.07.014_bb0430 article-title: Proteomic identification of OsCYP2, a rice cyclophilin that confers salt tolerance in rice (Oryza sativa L.) seedlings when overexpressed publication-title: BMC Plant Biol. doi: 10.1186/1471-2229-11-34 – volume: 14 issue: 3 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0165 article-title: Analysis of genetic control and QTL mapping of essential wheat grain quality traits in a recombinant inbred population publication-title: PLoS One doi: 10.1371/journal.pone.0200669 – volume: 33 start-page: 2030 year: 2015 ident: 10.1016/j.ygeno.2021.07.014_bb0335 article-title: Analysis of quantitative trait loci (QTL) for grain yield and agronomic traits in wheat (Triticum aestivum L.) under normal and salt-stress conditions. Plant Mol publication-title: Biol. Reprod. – ident: 10.1016/j.ygeno.2021.07.014_bb0230 – volume: 104 start-page: 75 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0175 article-title: Association mapping in plants in the post-GWAS genomics era publication-title: Adv. Genet. doi: 10.1016/bs.adgen.2018.12.001 – volume: 491 start-page: 642 issue: 3 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0530 article-title: The wheat salinity-induced R2R3-MYB transcription factor TaSIM confers salt stress tolerance in Arabidopsis thaliana publication-title: Biochem. Biophys. Res. Commun. doi: 10.1016/j.bbrc.2017.07.150 – volume: 20 start-page: 618 issue: 1 year: 2019 ident: 10.1016/j.ygeno.2021.07.014_bb0225 article-title: Estimation of a significance threshold for genome-wide association studies publication-title: BMC Genomics doi: 10.1186/s12864-019-5992-7 – volume: 12 issue: 8 year: 2017 ident: 10.1016/j.ygeno.2021.07.014_bb0140 article-title: QTL mapping for nine drought-responsive agronomic traits in bread wheat under irrigated and rain-fed environments publication-title: PLoS One doi: 10.1371/journal.pone.0182857 – volume: 6 start-page: 181 issue: 2 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0180 article-title: Function of the auxin-responsive gene TaSAUR75 under salt and drought stress publication-title: Crop J. doi: 10.1016/j.cj.2017.08.005 – start-page: 341784 year: 2018 ident: 10.1016/j.ygeno.2021.07.014_bb0545 article-title: A fast mrMLM algorithm for multi-locus genome-wide association studies publication-title: bioRxiv – volume: 4 start-page: 136 year: 2012 ident: 10.1016/j.ygeno.2021.07.014_bb0435 article-title: Improving the nutritional quality and health benefits of wheat publication-title: Qual. Assur. Saf. Crop. Foods doi: 10.1111/j.1757-837X.2012.00138.x
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Snippet	A genome-wide association study (GWAS) was conducted using six different multi-locus GWAS models and 35K SNP array to demarcate genomic regions underlying...
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SubjectTerms	Association mapping biomass Bread wheat Genome-Wide Association Study Genomics grain yield leaves Multi-locus GWAS nucleotides Phenotype plant height Polymorphism, Single Nucleotide Quantitative Trait Loci quantitative traits Salinity Salt Stress salt tolerance single nucleotide polymorphism arrays Triticum - genetics Triticum aestivum wheat
Title	Genome-wide association mapping reveals key genomic regions for physiological and yield-related traits under salinity stress in wheat (Triticum aestivum L.)
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