Machine Learning Model for Predicting Postoperative Survival of Patients with Colorectal Cancer

Machine learning (ML) is a strong candidate for making accurate predictions, as we can use large amount of data with powerful computational algorithms. We developed a ML based model to predict survival of patients with colorectal cancer (CRC) using data from two independent datasets. A total of 364,...

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Vydané v:Cancer research and treatment Ročník 54; číslo 2; s. 517
Hlavní autori: Osman, Mohamed Hosny, Mohamed, Reham Hosny, Sarhan, Hossam Mohamed, Park, Eun Jung, Baik, Seung Hyuk, Lee, Kang Young, Kang, Jeonghyun
Médium: Journal Article
Jazyk:English
Vydavateľské údaje: Korea (South) 01.04.2022
Predmet:
Colorectal Neoplasms - pathology
Humans
Machine Learning
Predictive Value of Tests
ROC Curve
Survival Rate
SEER
Colorectal neoplasms
Area under the curve
LightGBM
Mortality
Machine learning
ISSN:2005-9256, 2005-9256
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Shrnutí:Machine learning (ML) is a strong candidate for making accurate predictions, as we can use large amount of data with powerful computational algorithms. We developed a ML based model to predict survival of patients with colorectal cancer (CRC) using data from two independent datasets. A total of 364,316 and 1,572 CRC patients were included from the Surveillance, Epidemiology, and End Results (SEER) and a Korean dataset, respectively. As SEER combines data from 18 cancer registries, internal validation was done using 18-Fold-Cross-Validation then external validation was performed by testing the trained model on the Korean dataset. Performance was evaluated using area under the receiver operating characteristic curve (AUROC), sensitivity and positive predictive values. Clinicopathological characteristics were significantly different between the two datasets and the SEER showed a significant lower 5-year survival rate compared to the Korean dataset (60.1% vs. 75.3%, p < 0.001). The ML-based model using the Light gradient boosting algorithm achieved a better performance in predicting 5-year-survival compared to American Joint Committee on Cancer stage (AUROC, 0.804 vs. 0.736; p < 0.001). The most important features which influenced model performance were age, number of examined lymph nodes, and tumor size. Sensitivity and positive predictive values of predicting 5-year-survival for classes including dead or alive were reported as 68.14%, 77.51% and 49.88%, 88.1% respectively in the validation set. Survival probability can be checked using the web-based survival predictor (http://colorectalcancer.pythonanywhere.com). ML-based model achieved a much better performance compared to staging in individualized estimation of survival of patients with CRC.
Bibliografia:ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ISSN:2005-9256
2005-9256
DOI:10.4143/crt.2021.206