Fixed Block Compression Boosting in FM-Indexes: Theory and Practice

The FM index (Ferragina and Manzini in J ACM 52(4):552–581, 2005 ) is a widely-used compressed data structure that stores a string T in a compressed form and also supports fast pattern matching queries. In this paper, we describe new FM-index variants that combine nice theoretical properties, simple...

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Bibliographic Details
Published in:	Algorithmica Vol. 81; no. 4; pp. 1370 - 1391
Main Authors:	Gog, Simon, Kärkkäinen, Juha, Kempa, Dominik, Petri, Matthias, Puglisi, Simon J.
Format:	Journal Article
Language:	English
Published:	New York Springer US 01.04.2019 Springer Nature B.V
Subjects:	Algorithm Analysis and Problem Complexity Algorithms Computer Science Computer Systems Organization and Communication Networks Data storage Data structures Data Structures and Information Theory Mathematics of Computing Pattern matching Performance indices Theory of Computation Wavelet analysis Text indexing Compression boosting FM-index Wavelet tree Suffix array Pattern matching
ISSN:	0178-4617, 1432-0541
Online Access:	Get full text
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