The EMBL-EBI Job Dispatcher sequence analysis tools framework in 2024
The EMBL-EBI Job Dispatcher sequence analysis tools framework (https://www.ebi.ac.uk/jdispatcher) enables the scientific community to perform a diverse range of sequence analyses using popular bioinformatics applications. Free access to the tools and required sequence datasets is provided through us...
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| Vydané v: | Nucleic acids research Ročník 52; číslo W1; s. W521 - W525 |
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| Hlavní autori: | , , , , , , , |
| Médium: | Journal Article |
| Jazyk: | English |
| Vydavateľské údaje: |
England
Oxford University Press
05.07.2024
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| Predmet: | |
| ISSN: | 0305-1048, 1362-4962, 1362-4962 |
| On-line prístup: | Získať plný text |
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| Abstract | The EMBL-EBI Job Dispatcher sequence analysis tools framework (https://www.ebi.ac.uk/jdispatcher) enables the scientific community to perform a diverse range of sequence analyses using popular bioinformatics applications. Free access to the tools and required sequence datasets is provided through user-friendly web applications, as well as via RESTful and SOAP-based APIs. These are integrated into popular EMBL-EBI resources such as UniProt, InterPro, ENA and Ensembl Genomes. This paper overviews recent improvements to Job Dispatcher, including its brand new website and documentation, enhanced visualisations, improved job management, and a rising trend of user reliance on the service from low- and middle-income regions. |
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| AbstractList | The EMBL-EBI Job Dispatcher sequence analysis tools framework (https://www.ebi.ac.uk/jdispatcher) enables the scientific community to perform a diverse range of sequence analyses using popular bioinformatics applications. Free access to the tools and required sequence datasets is provided through user-friendly web applications, as well as via RESTful and SOAP-based APIs. These are integrated into popular EMBL-EBI resources such as UniProt, InterPro, ENA and Ensembl Genomes. This paper overviews recent improvements to Job Dispatcher, including its brand new website and documentation, enhanced visualisations, improved job management, and a rising trend of user reliance on the service from low- and middle-income regions.
Graphical Abstract The EMBL-EBI Job Dispatcher sequence analysis tools framework (https://www.ebi.ac.uk/jdispatcher) enables the scientific community to perform a diverse range of sequence analyses using popular bioinformatics applications. Free access to the tools and required sequence datasets is provided through user-friendly web applications, as well as via RESTful and SOAP-based APIs. These are integrated into popular EMBL-EBI resources such as UniProt, InterPro, ENA and Ensembl Genomes. This paper overviews recent improvements to Job Dispatcher, including its brand new website and documentation, enhanced visualisations, improved job management, and a rising trend of user reliance on the service from low- and middle-income regions. The EMBL-EBI Job Dispatcher sequence analysis tools framework (https://www.ebi.ac.uk/jdispatcher) enables the scientific community to perform a diverse range of sequence analyses using popular bioinformatics applications. Free access to the tools and required sequence datasets is provided through user-friendly web applications, as well as via RESTful and SOAP-based APIs. These are integrated into popular EMBL-EBI resources such as UniProt, InterPro, ENA and Ensembl Genomes. This paper overviews recent improvements to Job Dispatcher, including its brand new website and documentation, enhanced visualisations, improved job management, and a rising trend of user reliance on the service from low- and middle-income regions.The EMBL-EBI Job Dispatcher sequence analysis tools framework (https://www.ebi.ac.uk/jdispatcher) enables the scientific community to perform a diverse range of sequence analyses using popular bioinformatics applications. Free access to the tools and required sequence datasets is provided through user-friendly web applications, as well as via RESTful and SOAP-based APIs. These are integrated into popular EMBL-EBI resources such as UniProt, InterPro, ENA and Ensembl Genomes. This paper overviews recent improvements to Job Dispatcher, including its brand new website and documentation, enhanced visualisations, improved job management, and a rising trend of user reliance on the service from low- and middle-income regions. |
| Author | Madeira, Fábio Lopez, Rodrigo Lee, Joonheung Niewielska, Ania Tivey, Adrian R N Butcher, Sarah Eusebi, Alberto Madhusoodanan, Nandana |
| Author_xml | – sequence: 1 givenname: Fábio orcidid: 0000-0001-8728-9449 surname: Madeira fullname: Madeira, Fábio – sequence: 2 givenname: Nandana orcidid: 0000-0001-5004-152X surname: Madhusoodanan fullname: Madhusoodanan, Nandana – sequence: 3 givenname: Joonheung orcidid: 0000-0002-5760-2761 surname: Lee fullname: Lee, Joonheung – sequence: 4 givenname: Alberto orcidid: 0000-0001-5179-7724 surname: Eusebi fullname: Eusebi, Alberto – sequence: 5 givenname: Ania orcidid: 0000-0003-0989-3389 surname: Niewielska fullname: Niewielska, Ania – sequence: 6 givenname: Adrian R N orcidid: 0000-0003-3949-4338 surname: Tivey fullname: Tivey, Adrian R N – sequence: 7 givenname: Rodrigo orcidid: 0000-0003-1256-7306 surname: Lopez fullname: Lopez, Rodrigo – sequence: 8 givenname: Sarah orcidid: 0000-0002-4494-5124 surname: Butcher fullname: Butcher, Sarah |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/38597606$$D View this record in MEDLINE/PubMed |
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