SPACE: STRING proteins as complementary embeddings

Abstract Motivation Representation learning has revolutionized sequence-based prediction of protein function and subcellular localization. Protein networks are an important source of information complementary to sequences, but the use of protein networks has proven to be challenging in the context o...

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Bibliographic Details
Published in:	Bioinformatics (Oxford, England) Vol. 41; no. 9
Main Authors:	Hu, Dewei, Szklarczyk, Damian, von Mering, Christian, Jensen, Lars Juhl
Format:	Journal Article
Language:	English
Published:	England Oxford University Press 01.09.2025 Oxford Publishing Limited (England)
Subjects:	Amino acid sequence Availability Computational Biology - methods Databases, Protein Deep Learning Embedding Eukaryotes Humans Localization Machine Learning Networks Orthology Predictions Proteins Proteins - chemistry Proteins - metabolism Sequence Analysis, Protein - methods Source code Species Species comparisons Strings
ISSN:	1367-4811, 1367-4803, 1367-4811
Online Access:	Get full text
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