Rapid identification of Candida species by FT-IR microspectroscopy
Due to the continuous increase of human candidiasis and the great diversity of yeasts of the Candida genera, it is indispensable to identify this yeast as early as possible. Early identification enables an early diagnostic and patient-adapted anti-fungal therapy, thus reducing morbidity and mortalit...
Uloženo v:
| Vydáno v: | Biochimica et biophysica acta Ročník 1724; číslo 3; s. 239 - 247 |
|---|---|
| Hlavní autoři: | , , , , , |
| Médium: | Journal Article |
| Jazyk: | angličtina |
| Vydáno: |
Netherlands
Elsevier B.V
05.08.2005
|
| Témata: | |
| ISSN: | 0304-4165, 0006-3002, 1872-8006 |
| On-line přístup: | Získat plný text |
| Tagy: |
Přidat tag
Žádné tagy, Buďte první, kdo vytvoří štítek k tomuto záznamu!
|
| Abstract | Due to the continuous increase of human candidiasis and the great diversity of yeasts of the
Candida genera, it is indispensable to identify this yeast as early as possible. Early identification enables an early diagnostic and patient-adapted anti-fungal therapy, thus reducing morbidity and mortality related to these infections. In view of this, we have in this study investigated microcolonies using a method based on Fourier transform-infrared microspectroscopy (FTIRM) for a rapid and early identification of the most frequent
Candida species encountered in human pathology. FTIR spectroscopy is a whole-cell “fingerprinting” method by which microorganisms can be identified. By exploiting the huge discriminating capacity of this technique, we identified 6 species (
Candida albicans,
Candida glabrata,
Candida parapsilosis,
Candida tropicalis,
Candida krusei, and
Candida kefyr) from a collection of 57 clinical strains of
Candida, isolated from hospitalised patients. Data obtained on 10- to 18-h-old microcolonies were compared to cultures of 24 h. Our results clearly show the efficiency and the robustness of FTIR (micro)spectroscopy in identifying species with a classification rate of 100% for both microcolonies and 24-h cultures. FTIR microspectroscopy is thus a promising clinical approach, because compared to conventional and molecular techniques, it is time and money saving, has great identification and discriminating potentials, and is amenable to an automated high-throughput routine system. |
|---|---|
| AbstractList | Due to the continuous increase of human candidiasis and the great diversity of yeasts of the
Candida genera, it is indispensable to identify this yeast as early as possible. Early identification enables an early diagnostic and patient-adapted anti-fungal therapy, thus reducing morbidity and mortality related to these infections. In view of this, we have in this study investigated microcolonies using a method based on Fourier transform-infrared microspectroscopy (FTIRM) for a rapid and early identification of the most frequent
Candida species encountered in human pathology. FTIR spectroscopy is a whole-cell “fingerprinting” method by which microorganisms can be identified. By exploiting the huge discriminating capacity of this technique, we identified 6 species (
Candida albicans,
Candida glabrata,
Candida parapsilosis,
Candida tropicalis,
Candida krusei, and
Candida kefyr) from a collection of 57 clinical strains of
Candida, isolated from hospitalised patients. Data obtained on 10- to 18-h-old microcolonies were compared to cultures of 24 h. Our results clearly show the efficiency and the robustness of FTIR (micro)spectroscopy in identifying species with a classification rate of 100% for both microcolonies and 24-h cultures. FTIR microspectroscopy is thus a promising clinical approach, because compared to conventional and molecular techniques, it is time and money saving, has great identification and discriminating potentials, and is amenable to an automated high-throughput routine system. Due to the continuous increase of human candidiasis and the great diversity of yeasts of the Candida genera, it is indispensable to identify this yeast as early as possible. Early identification enables an early diagnostic and patient-adapted anti-fungal therapy, thus reducing morbidity and mortality related to these infections. In view of this, we have in this study investigated microcolonies using a method based on Fourier transform-infrared microspectroscopy (FTIRM) for a rapid and early identification of the most frequent Candida species encountered in human pathology. FTIR spectroscopy is a whole-cell "fingerprinting" method by which microorganisms can be identified. By exploiting the huge discriminating capacity of this technique, we identified 6 species (Candida albicans, Candida glabrata, Candida parapsilosis, Candida tropicalis, Candida krusei, and Candida kefyr) from a collection of 57 clinical strains of Candida, isolated from hospitalised patients. Data obtained on 10- to 18-h-old microcolonies were compared to cultures of 24 h. Our results clearly show the efficiency and the robustness of FTIR (micro)spectroscopy in identifying species with a classification rate of 100% for both microcolonies and 24-h cultures. FTIR microspectroscopy is thus a promising clinical approach, because compared to conventional and molecular techniques, it is time and money saving, has great identification and discriminating potentials, and is amenable to an automated high-throughput routine system. Due to the continuous increase of human candidiasis and the great diversity of yeasts of the Candida genera, it is indispensable to identify this yeast as early as possible. Early identification enables an early diagnostic and patient-adapted anti-fungal therapy, thus reducing morbidity and mortality related to these infections. In view of this, we have in this study investigated microcolonies using a method based on Fourier transform-infrared microspectroscopy (FTIRM) for a rapid and early identification of the most frequent Candida species encountered in human pathology. FTIR spectroscopy is a whole-cell "fingerprinting" method by which microorganisms can be identified. By exploiting the huge discriminating capacity of this technique, we identified 6 species (Candida albicans, Candida glabrata, Candida parapsilosis, Candida tropicalis, Candida krusei, and Candida kefyr) from a collection of 57 clinical strains of Candida, isolated from hospitalised patients. Data obtained on 10- to 18-h-old microcolonies were compared to cultures of 24 h. Our results clearly show the efficiency and the robustness of FTIR (micro)spectroscopy in identifying species with a classification rate of 100% for both microcolonies and 24-h cultures. FTIR microspectroscopy is thus a promising clinical approach, because compared to conventional and molecular techniques, it is time and money saving, has great identification and discriminating potentials, and is amenable to an automated high-throughput routine system.Due to the continuous increase of human candidiasis and the great diversity of yeasts of the Candida genera, it is indispensable to identify this yeast as early as possible. Early identification enables an early diagnostic and patient-adapted anti-fungal therapy, thus reducing morbidity and mortality related to these infections. In view of this, we have in this study investigated microcolonies using a method based on Fourier transform-infrared microspectroscopy (FTIRM) for a rapid and early identification of the most frequent Candida species encountered in human pathology. FTIR spectroscopy is a whole-cell "fingerprinting" method by which microorganisms can be identified. By exploiting the huge discriminating capacity of this technique, we identified 6 species (Candida albicans, Candida glabrata, Candida parapsilosis, Candida tropicalis, Candida krusei, and Candida kefyr) from a collection of 57 clinical strains of Candida, isolated from hospitalised patients. Data obtained on 10- to 18-h-old microcolonies were compared to cultures of 24 h. Our results clearly show the efficiency and the robustness of FTIR (micro)spectroscopy in identifying species with a classification rate of 100% for both microcolonies and 24-h cultures. FTIR microspectroscopy is thus a promising clinical approach, because compared to conventional and molecular techniques, it is time and money saving, has great identification and discriminating potentials, and is amenable to an automated high-throughput routine system. |
| Author | Essendoubi, Mohammed Manfait, Michel Sockalingum, Ganesh D. Pinon, Jean-Michel Toubas, Dominique Bouzaggou, Mohamed |
| Author_xml | – sequence: 1 givenname: Mohammed surname: Essendoubi fullname: Essendoubi, Mohammed organization: Unité MéDIAN, CNRS UMR 6142, UFR de Pharmacie, IFR53, Université de Reims Champagne-Ardenne, 51 rue Cognacq-Jay, 51096 Reims Cedex, France – sequence: 2 givenname: Dominique surname: Toubas fullname: Toubas, Dominique organization: Laboratoire de Parasitologie-Mycologie, EA 3800, UFR de Médecine, IFR 53, Université de Reims Champagne-Ardenne, 51 rue Cognacq-Jay, 51096 Reims Cedex, France – sequence: 3 givenname: Mohamed surname: Bouzaggou fullname: Bouzaggou, Mohamed organization: Unité MéDIAN, CNRS UMR 6142, UFR de Pharmacie, IFR53, Université de Reims Champagne-Ardenne, 51 rue Cognacq-Jay, 51096 Reims Cedex, France – sequence: 4 givenname: Jean-Michel surname: Pinon fullname: Pinon, Jean-Michel organization: Laboratoire de Parasitologie-Mycologie, EA 3800, UFR de Médecine, IFR 53, Université de Reims Champagne-Ardenne, 51 rue Cognacq-Jay, 51096 Reims Cedex, France – sequence: 5 givenname: Michel surname: Manfait fullname: Manfait, Michel organization: Unité MéDIAN, CNRS UMR 6142, UFR de Pharmacie, IFR53, Université de Reims Champagne-Ardenne, 51 rue Cognacq-Jay, 51096 Reims Cedex, France – sequence: 6 givenname: Ganesh D. surname: Sockalingum fullname: Sockalingum, Ganesh D. email: ganesh.sockalingum@univ-reims.fr organization: Unité MéDIAN, CNRS UMR 6142, UFR de Pharmacie, IFR53, Université de Reims Champagne-Ardenne, 51 rue Cognacq-Jay, 51096 Reims Cedex, France |
| BackLink | https://www.ncbi.nlm.nih.gov/pubmed/15951116$$D View this record in MEDLINE/PubMed |
| BookMark | eNp9kFFLwzAUhYNMdJv-A5E--dZ606Rp64Ogw-lAEESfQ5rcSMbW1qYT9u9N3fTBh92XA5dzDpxvQkZ1UyMhFxQSClRcL5OqUh9YJylAlgBPgJZHZEyLPI0LADEiY2DAY05Fdkom3i8hXFZmJ-SUBqGUijG5f1WtM5EzWPfOOq1619RRY6OZqo0zKvItaoc-qrbR_C1evEZrp7tm-PZBdNNuz8ixVSuP53udkvf5w9vsKX5-eVzM7p5jzQT0McsV5SxFJnih0eZgCw3IU12Umqe8sKoEnlll0eRZbkEAq5jIeVUYzgyzbEqudr1t13xu0Pdy7bzG1UrV2Gy8FAXPUhBlMF7ujZtqjUa2nVurbit_VwfDzc4wLPEdWqld_7O875RbSQpyQCyXcodYDoglcBkQhzD_F_7rPxy73cUwIPpy2EkfuNYajesCS2kad7jgG4bwlhE |
| CitedBy_id | crossref_primary_10_1007_s00216_006_0851_1 crossref_primary_10_1586_14787210_7_1_121 crossref_primary_10_1007_s00216_006_1005_1 crossref_primary_10_1039_D0NR05617K crossref_primary_10_1007_s13213_015_1115_0 crossref_primary_10_1111_j_1750_3841_2010_02034_x crossref_primary_10_1371_journal_pone_0115275 crossref_primary_10_1016_j_talanta_2016_04_030 crossref_primary_10_3390_jof9020264 crossref_primary_10_1016_j_vibspec_2011_07_008 crossref_primary_10_1016_j_fm_2014_12_014 crossref_primary_10_1016_j_aca_2009_11_035 crossref_primary_10_1016_j_mimet_2017_08_013 crossref_primary_10_1111_j_1365_2672_2006_02969_x crossref_primary_10_1371_journal_pone_0188104 crossref_primary_10_1177_154405910708600304 crossref_primary_10_1002_bem_20506 crossref_primary_10_1016_j_jphotobiol_2009_03_009 crossref_primary_10_1016_j_colsurfb_2014_01_054 crossref_primary_10_3389_fbioe_2019_00376 crossref_primary_10_3390_metabo10040140 crossref_primary_10_1016_j_mimet_2007_09_018 crossref_primary_10_1111_lam_12691 crossref_primary_10_3390_pathogens8030136 crossref_primary_10_1007_s00216_008_1834_1 crossref_primary_10_1007_s00374_024_01885_y crossref_primary_10_1016_j_crci_2016_05_011 crossref_primary_10_1098_rsos_180718 crossref_primary_10_1016_j_foodchem_2012_03_025 crossref_primary_10_3390_ijms20040988 crossref_primary_10_1007_s00216_006_0850_2 crossref_primary_10_1002_yea_1285 crossref_primary_10_1016_j_mimet_2015_12_009 crossref_primary_10_1002_jsfa_6239 crossref_primary_10_1007_s11064_016_2095_6 crossref_primary_10_1007_s12014_010_9057_9 crossref_primary_10_1117_1_2397554 crossref_primary_10_1007_s00216_009_2908_4 crossref_primary_10_1007_s00253_013_5087_3 crossref_primary_10_1016_j_resmic_2009_12_007 crossref_primary_10_1016_j_vibspec_2018_03_001 crossref_primary_10_1088_2516_1067_aae7e1 crossref_primary_10_3390_jof10110753 crossref_primary_10_3389_fmicb_2022_830277 crossref_primary_10_1080_13693780802566325 crossref_primary_10_1016_j_cpb_2024_100357 crossref_primary_10_3389_fmicb_2020_00899 crossref_primary_10_1039_c0an00515k crossref_primary_10_1007_s11274_013_1574_z crossref_primary_10_3390_molecules25071551 crossref_primary_10_1039_c0an00127a crossref_primary_10_1111_ijd_4957 crossref_primary_10_3390_microorganisms13020455 crossref_primary_10_2147_IDR_S383785 crossref_primary_10_1002_jbio_201700047 crossref_primary_10_1016_j_aca_2022_340658 crossref_primary_10_3389_fchem_2024_1412288 crossref_primary_10_1128_AEM_00315_08 crossref_primary_10_3390_microorganisms8081242 crossref_primary_10_1007_s00572_023_01128_2 crossref_primary_10_1016_j_apsoil_2024_105481 |
| Cites_doi | 10.1128/JCM.32.7.1757-1762.1994 10.1128/JCM.36.2.421-426.1998 10.1128/AEM.64.6.2207-2214.1998 10.1038/351081a0 10.1086/520194 10.1128/JCM.39.5.1763-1770.2001 10.1046/j.1365-2672.2003.02154.x 10.1366/0003702001948619 10.1002/(SICI)1097-0061(199807)14:10<885::AID-YEA286>3.0.CO;2-G 10.1128/JCM.40.7.2363-2369.2002 10.1099/00221287-137-1-69 10.1111/j.1574-6968.2001.tb10601.x 10.1016/S0934-8840(11)80707-3 10.1128/CMR.8.4.462 10.1086/313450 10.1016/S1387-2656(00)06021-X 10.1016/S0002-9343(89)80392-4 10.3201/eid0702.010234 10.1128/JCM.41.1.324-329.2003 10.1128/JCM.41.3.954-959.2003 10.1039/b408169b 10.1006/bbrc.1997.6263 10.1016/S0014-5793(97)00725-4 10.1093/clinids/22.Supplement_2.S89 10.1016/S0934-8840(99)80063-2 10.1086/513663 10.1001/archinte.149.10.2349 10.1128/JCM.34.7.1846-1848.1996 |
| ContentType | Journal Article |
| Copyright | 2005 Elsevier B.V. |
| Copyright_xml | – notice: 2005 Elsevier B.V. |
| DBID | AAYXX CITATION CGR CUY CVF ECM EIF NPM 7X8 |
| DOI | 10.1016/j.bbagen.2005.04.019 |
| DatabaseName | CrossRef Medline MEDLINE MEDLINE (Ovid) MEDLINE MEDLINE PubMed MEDLINE - Academic |
| DatabaseTitle | CrossRef MEDLINE Medline Complete MEDLINE with Full Text PubMed MEDLINE (Ovid) MEDLINE - Academic |
| DatabaseTitleList | MEDLINE MEDLINE - Academic |
| Database_xml | – sequence: 1 dbid: NPM name: PubMed url: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed sourceTypes: Index Database – sequence: 2 dbid: 7X8 name: MEDLINE - Academic url: https://search.proquest.com/medline sourceTypes: Aggregation Database |
| DeliveryMethod | fulltext_linktorsrc |
| Discipline | Chemistry Biology |
| EISSN | 1872-8006 |
| EndPage | 247 |
| ExternalDocumentID | 15951116 10_1016_j_bbagen_2005_04_019 S0304416505001169 |
| Genre | Research Support, Non-U.S. Gov't Journal Article Review |
| GroupedDBID | --- --K --M .~1 0R~ 1B1 1RT 1~. 1~5 23N 3O- 4.4 457 4G. 53G 5GY 5RE 5VS 7-5 71M 8P~ 9JM AACTN AAEDT AAEDW AAIAV AAIKJ AAKOC AALRI AAOAW AAQFI AAQXK AAXUO ABEFU ABFNM ABGSF ABMAC ABUDA ABXDB ABYKQ ACDAQ ACIUM ACRLP ADBBV ADEZE ADMUD ADUVX AEBSH AEHWI AEKER AFKWA AFTJW AFXIZ AGHFR AGRDE AGUBO AGYEJ AHHHB AIEXJ AIKHN AITUG AJBFU AJOXV ALMA_UNASSIGNED_HOLDINGS AMFUW AMRAJ ASPBG AVWKF AXJTR AZFZN BKOJK BLXMC CS3 DOVZS EBS EFJIC EFLBG EJD EO8 EO9 EP2 EP3 FDB FEDTE FGOYB FIRID FNPLU FYGXN G-2 G-Q GBLVA HLW HVGLF HZ~ IHE J1W KOM LX3 M41 MO0 N9A O-L O9- OAUVE OHT OZT P-8 P-9 PC. Q38 R2- ROL RPZ SBG SCC SDF SDG SDP SES SEW SPCBC SSU SSZ T5K UQL WH7 WUQ XJT XPP ~G- 9DU AAHBH AATTM AAXKI AAYWO AAYXX ABWVN ACLOT ACRPL ACVFH ADCNI ADNMO AEIPS AEUPX AFJKZ AFPUW AGQPQ AIGII AIIUN AKBMS AKRWK AKYEP ANKPU APXCP CITATION EFKBS ~HD -~X .55 .GJ ABJNI CGR CUY CVF ECM EIF F5P NPM RIG TWZ X7M Y6R ZGI ~KM 7X8 |
| ID | FETCH-LOGICAL-c360t-37a1432e3648cef70f8c0e42c89c4248fa9045fafed757f0603b3674b8d43d3f3 |
| ISICitedReferencesCount | 83 |
| ISICitedReferencesURI | http://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=Summon&SrcAuth=ProQuest&DestLinkType=CitingArticles&DestApp=WOS_CPL&KeyUT=000231187100004&url=https%3A%2F%2Fcvtisr.summon.serialssolutions.com%2F%23%21%2Fsearch%3Fho%3Df%26include.ft.matches%3Dt%26l%3Dnull%26q%3D |
| ISSN | 0304-4165 0006-3002 |
| IngestDate | Fri Sep 05 14:35:10 EDT 2025 Sat Sep 28 07:44:11 EDT 2024 Sat Nov 29 01:37:47 EST 2025 Tue Nov 18 21:50:46 EST 2025 Fri Feb 23 02:32:37 EST 2024 |
| IsPeerReviewed | true |
| IsScholarly | true |
| Issue | 3 |
| Keywords | Early identification Candida species Microcolony Fourier transform-infrared (micro)spectroscopy |
| Language | English |
| License | https://www.elsevier.com/tdm/userlicense/1.0 |
| LinkModel | OpenURL |
| MergedId | FETCHMERGED-LOGICAL-c360t-37a1432e3648cef70f8c0e42c89c4248fa9045fafed757f0603b3674b8d43d3f3 |
| Notes | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 ObjectType-Review-3 content type line 23 |
| PMID | 15951116 |
| PQID | 68452069 |
| PQPubID | 23479 |
| PageCount | 9 |
| ParticipantIDs | proquest_miscellaneous_68452069 pubmed_primary_15951116 crossref_citationtrail_10_1016_j_bbagen_2005_04_019 crossref_primary_10_1016_j_bbagen_2005_04_019 elsevier_sciencedirect_doi_10_1016_j_bbagen_2005_04_019 |
| PublicationCentury | 2000 |
| PublicationDate | 2005-08-05 |
| PublicationDateYYYYMMDD | 2005-08-05 |
| PublicationDate_xml | – month: 08 year: 2005 text: 2005-08-05 day: 05 |
| PublicationDecade | 2000 |
| PublicationPlace | Netherlands |
| PublicationPlace_xml | – name: Netherlands |
| PublicationTitle | Biochimica et biophysica acta |
| PublicationTitleAlternate | Biochim Biophys Acta |
| PublicationYear | 2005 |
| Publisher | Elsevier B.V |
| Publisher_xml | – name: Elsevier B.V |
| References | Winder, Carr, Goodacre, Seviour (bib29) 2004; 96 Hazen (bib8) 1995; 8 Timmins, Quains, Goodacre (bib24) 1998; 14 Maquelin, Kirschner, Choo-Smith, Ngo-Thi, Van Vreeswijk, Stammler, Endtz, Bruining, Naumann, Puppels (bib11) 2003; 41 Galichet, Sockalingum, Belarbi, Manfait (bib20) 2001; 197 Kao, Brandt, Pruitt, Conn, Perkins, Stephens, Baughman, Reingold, Rothrock, Pfaller, Pinner, Hajjeh (bib9) 1999; 29 Udelhoven, Naumann, Schmitt (bib28) 2000; 54 Irmscher, Fischer, Beer, Seltmann (bib25) 1999; 289 Kümmerle, Scherer, Seiler (bib22) 1998; 64 Wey, Motomi, Pfaller, Wolsen, Wenzel (bib6) 1989; 149 Lupetti, Tavanti, Davini, Ghelardi, Corsini, Merusi, Boldrini, Campa, Senesi (bib4) 2002; 40 Sakallah (bib14) 2000; 6 Miller, O'Hara (bib12) 1999 Fricker-Hidalgo, Vandapel, Duchesne, Mazoyer, Monget, Lardy, Lebeau, Freney, Ambroise-Thomas, Grillot (bib27) 1996; 34 Pfaller (bib13) 2001; 7 Sockalingum, Bouhedja, Pina, Allouch, Mandray, Labia, Millot, Manfait (bib17) 1997; 232 Rangel-Frausto, Wiblin, Blumberg, Saiman, Patterson, Rinaldi, Pfaller, Edwards, Jarvis, Dawson, Wenzel (bib3) 1999; 29 Bouhedja, Sockalingum, Pina, Allouch, Mandray, Labia, Millot, Manfait (bib18) 1997; 412 Vazquez, Dembry, Sanchez, Vazquez, Sobel, Dmuchowski, Zervos (bib7) 1998; 36 Doern, Vautour, Gaudet, Levy (bib10) 1994; 32 Abi-Said, Anaissie, Uzun, Raad, Pinzcowski, Vartivarian (bib2) 1997; 24 Helm, Labischinski, Schallehn, Naumann (bib21) 1991; 137 Naumann, Helm, Labischinski (bib15) 1991; 351 Sandt, Sockalingum, Aubert, Lepan, Lepouse, Jaussaud, Leon, Pinon, Manfait, Toubas (bib19) 2003; 41 Kirschner, Maquelin, Pina, Ngo Thi, Choo-Smith, Sockalingum, Sandt, Ami, Orsini, Doglia, Allouch, Mainfait, Puppels, Naumann (bib16) 2001; 39 Pfaller (bib1) 1996; 22 Nauman (bib30) 2000 Seltmann, Beer, Claus, Seifert (bib23) 1995; 282 Winder, Goodacre (bib26) 2004; 129 Bross, Talbot, Maislin, Hurwitz, Strom (bib5) 1989; 87 Kirschner (10.1016/j.bbagen.2005.04.019_bib16) 2001; 39 Galichet (10.1016/j.bbagen.2005.04.019_bib20) 2001; 197 Bouhedja (10.1016/j.bbagen.2005.04.019_bib18) 1997; 412 Kümmerle (10.1016/j.bbagen.2005.04.019_bib22) 1998; 64 Naumann (10.1016/j.bbagen.2005.04.019_bib15) 1991; 351 Timmins (10.1016/j.bbagen.2005.04.019_bib24) 1998; 14 Doern (10.1016/j.bbagen.2005.04.019_bib10) 1994; 32 Wey (10.1016/j.bbagen.2005.04.019_bib6) 1989; 149 Sandt (10.1016/j.bbagen.2005.04.019_bib19) 2003; 41 Abi-Said (10.1016/j.bbagen.2005.04.019_bib2) 1997; 24 Kao (10.1016/j.bbagen.2005.04.019_bib9) 1999; 29 Bross (10.1016/j.bbagen.2005.04.019_bib5) 1989; 87 Winder (10.1016/j.bbagen.2005.04.019_bib29) 2004; 96 Pfaller (10.1016/j.bbagen.2005.04.019_bib1) 1996; 22 Nauman (10.1016/j.bbagen.2005.04.019_bib30) 2000 Rangel-Frausto (10.1016/j.bbagen.2005.04.019_bib3) 1999; 29 Pfaller (10.1016/j.bbagen.2005.04.019_bib13) 2001; 7 Sockalingum (10.1016/j.bbagen.2005.04.019_bib17) 1997; 232 Irmscher (10.1016/j.bbagen.2005.04.019_bib25) 1999; 289 Winder (10.1016/j.bbagen.2005.04.019_bib26) 2004; 129 Sakallah (10.1016/j.bbagen.2005.04.019_bib14) 2000; 6 Miller (10.1016/j.bbagen.2005.04.019_bib12) 1999 Maquelin (10.1016/j.bbagen.2005.04.019_bib11) 2003; 41 Hazen (10.1016/j.bbagen.2005.04.019_bib8) 1995; 8 Lupetti (10.1016/j.bbagen.2005.04.019_bib4) 2002; 40 Seltmann (10.1016/j.bbagen.2005.04.019_bib23) 1995; 282 Vazquez (10.1016/j.bbagen.2005.04.019_bib7) 1998; 36 Helm (10.1016/j.bbagen.2005.04.019_bib21) 1991; 137 Fricker-Hidalgo (10.1016/j.bbagen.2005.04.019_bib27) 1996; 34 Udelhoven (10.1016/j.bbagen.2005.04.019_bib28) 2000; 54 |
| References_xml | – volume: 29 start-page: 253 year: 1999 end-page: 258 ident: bib3 article-title: National epidemiology of mycoses survey (NEMIS): variations in rates of bloodstream infections due to publication-title: Clin. Infect. Dis. – volume: 197 start-page: 179 year: 2001 end-page: 186 ident: bib20 article-title: FTIR spectroscopy analysis of publication-title: FEMS Microbiol. Lett. – volume: 412 start-page: 39 year: 1997 end-page: 42 ident: bib18 article-title: ATR-FTIR spectroscopic investigation of publication-title: FEBS Lett. – volume: 289 start-page: 249 year: 1999 end-page: 263 ident: bib25 article-title: Characterization of nosocomial publication-title: Zentralbl. Bakteriol. – volume: 32 start-page: 1757 year: 1994 end-page: 1762 ident: bib10 article-title: Clinical impact of rapid in vitro susceptibility testing and bacterial identification publication-title: J. Clin. Microbiol. – volume: 24 start-page: 1122 year: 1997 end-page: 1228 ident: bib2 article-title: The epidemiology of hematogenous candidiasis caused by different publication-title: Clin. Infect. Dis. – volume: 36 start-page: 421 year: 1998 end-page: 426 ident: bib7 article-title: Nosocomial publication-title: J. Clin. Microbiol. – volume: 137 start-page: 69 year: 1991 end-page: 79 ident: bib21 article-title: Classification and identification of bacteria by Fourier-transform infrared spectroscopy publication-title: J. Gen. Microbiol. – volume: 54 start-page: 1471 year: 2000 end-page: 1479 ident: bib28 article-title: Development of hierarchical classification system with artificial neural networks and FT-IR spectra for the identification of bacteria publication-title: Appl. Spectrosc. – volume: 22 start-page: S89 year: 1996 end-page: S94 ident: bib1 article-title: Nosocomial candidiasis: emerging species, reservoirs, and modes of transmission publication-title: Clin. Infect. Dis. – volume: 232 start-page: 240 year: 1997 end-page: 246 ident: bib17 article-title: ATR-FTIR spectroscopic investigation of imipenem-susceptible and resistant publication-title: Biochem. Biophys. Res. Commun. – start-page: 102 year: 2000 end-page: 131 ident: bib30 article-title: Infrared spectroscopy in microbiology publication-title: Encyclopedia of Analytical Chemistry – volume: 149 start-page: 2249 year: 1989 end-page: 2253 ident: bib6 article-title: Risk factors for hospital-acquired candidemia: a matched case-control study publication-title: Arch. Intern. Med. – volume: 64 start-page: 2207 year: 1998 end-page: 2214 ident: bib22 article-title: Rapid and reliable identification of food-borne yeasts by Fourier-transform infrared spectroscopy publication-title: Appl. Environ. Microbiol. – volume: 40 start-page: 2363 year: 2002 end-page: 2369 ident: bib4 article-title: Horizontal transmission of publication-title: J. Clin. Microbiol. – volume: 7 start-page: 312 year: 2001 end-page: 318 ident: bib13 article-title: Molecular approaches to diagnosing and managing infectious diseases: practicality and costs publication-title: Emerg. Infect. Dis. – volume: 282 start-page: 372 year: 1995 end-page: 383 ident: bib23 article-title: Comparative classification of publication-title: Zentralbl. Bakteriol. – start-page: 193 year: 1999 end-page: 201 ident: bib12 article-title: Manual and automated systems for microbial identification publication-title: Manual of Clinical Microbiology – volume: 6 start-page: 141 year: 2000 end-page: 161 ident: bib14 article-title: Molecular diagnostics of infectious diseases: state of the technology publication-title: Biotechnol. Annu. Rev. – volume: 41 start-page: 954 year: 2003 end-page: 959 ident: bib19 article-title: Use of Fourier-transform infrared spectroscopy for typing of publication-title: J. Clin. Microbiol. – volume: 8 start-page: 462 year: 1995 end-page: 478 ident: bib8 article-title: New and emerging yeast pathogens publication-title: Clin. Microbiol. Rev. – volume: 34 start-page: 1846 year: 1996 end-page: 1848 ident: bib27 article-title: Comparison of the new API publication-title: J. Clin. Microbiol. – volume: 29 start-page: 1164 year: 1999 end-page: 1170 ident: bib9 article-title: The epidemiology of candidemia in two United States cities: results of a population-based active surveillance publication-title: Clin. Infect. Dis. – volume: 14 start-page: 885 year: 1998 end-page: 893 ident: bib24 article-title: Differentiation of brewing yeast strains by pyrolysis mass spectrometry and Fourier transform infrared spectroscopy publication-title: Yeast – volume: 41 start-page: 324 year: 2003 end-page: 329 ident: bib11 article-title: Prospective study of the performance of vibrational spectroscopies for rapid identification of bacterial and fungal pathogens recovered from blood cultures publication-title: J. Clin. Microbiol. – volume: 87 start-page: 614 year: 1989 end-page: 620 ident: bib5 article-title: Risk factors for nosocomial candidemia: a case-control study in adults without leukemia publication-title: Am. J. Med. – volume: 351 start-page: 81 year: 1991 end-page: 82 ident: bib15 article-title: Microbiological characterizations by FT-IR spectroscopy publication-title: Nature – volume: 39 start-page: 1763 year: 2001 end-page: 1770 ident: bib16 article-title: Classification and identification of enterococci: a comparative phenotypic, genotypic, and vibrational spectroscopic study publication-title: J. Clin. Microbiol. – volume: 96 start-page: 328 year: 2004 end-page: 339 ident: bib29 article-title: The rapid identification of publication-title: J. Appl. Microbiol. – volume: 129 start-page: 1118 year: 2004 end-page: 1122 ident: bib26 article-title: Comparison of diffuse-reflectance absorbance and attenuated total reflectance FT-IR for the discrimination of bacteria publication-title: Analyst – volume: 32 start-page: 1757 year: 1994 ident: 10.1016/j.bbagen.2005.04.019_bib10 article-title: Clinical impact of rapid in vitro susceptibility testing and bacterial identification publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.32.7.1757-1762.1994 – volume: 36 start-page: 421 year: 1998 ident: 10.1016/j.bbagen.2005.04.019_bib7 article-title: Nosocomial Candida glabrata colonization: an epidemiologic study publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.36.2.421-426.1998 – volume: 64 start-page: 2207 year: 1998 ident: 10.1016/j.bbagen.2005.04.019_bib22 article-title: Rapid and reliable identification of food-borne yeasts by Fourier-transform infrared spectroscopy publication-title: Appl. Environ. Microbiol. doi: 10.1128/AEM.64.6.2207-2214.1998 – volume: 351 start-page: 81 year: 1991 ident: 10.1016/j.bbagen.2005.04.019_bib15 article-title: Microbiological characterizations by FT-IR spectroscopy publication-title: Nature doi: 10.1038/351081a0 – volume: 29 start-page: 253 year: 1999 ident: 10.1016/j.bbagen.2005.04.019_bib3 article-title: National epidemiology of mycoses survey (NEMIS): variations in rates of bloodstream infections due to Candida species in seven surgical intensive care units and six neonatal intensive care units publication-title: Clin. Infect. Dis. doi: 10.1086/520194 – volume: 39 start-page: 1763 year: 2001 ident: 10.1016/j.bbagen.2005.04.019_bib16 article-title: Classification and identification of enterococci: a comparative phenotypic, genotypic, and vibrational spectroscopic study publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.39.5.1763-1770.2001 – volume: 96 start-page: 328 year: 2004 ident: 10.1016/j.bbagen.2005.04.019_bib29 article-title: The rapid identification of Acinetobacter species using Fourier transform infrared spectroscopy publication-title: J. Appl. Microbiol. doi: 10.1046/j.1365-2672.2003.02154.x – volume: 54 start-page: 1471 year: 2000 ident: 10.1016/j.bbagen.2005.04.019_bib28 article-title: Development of hierarchical classification system with artificial neural networks and FT-IR spectra for the identification of bacteria publication-title: Appl. Spectrosc. doi: 10.1366/0003702001948619 – volume: 14 start-page: 885 year: 1998 ident: 10.1016/j.bbagen.2005.04.019_bib24 article-title: Differentiation of brewing yeast strains by pyrolysis mass spectrometry and Fourier transform infrared spectroscopy publication-title: Yeast doi: 10.1002/(SICI)1097-0061(199807)14:10<885::AID-YEA286>3.0.CO;2-G – volume: 40 start-page: 2363 year: 2002 ident: 10.1016/j.bbagen.2005.04.019_bib4 article-title: Horizontal transmission of Candida parapsilosis candidemia in a neonatal intensive care unit publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.40.7.2363-2369.2002 – volume: 137 start-page: 69 year: 1991 ident: 10.1016/j.bbagen.2005.04.019_bib21 article-title: Classification and identification of bacteria by Fourier-transform infrared spectroscopy publication-title: J. Gen. Microbiol. doi: 10.1099/00221287-137-1-69 – volume: 197 start-page: 179 year: 2001 ident: 10.1016/j.bbagen.2005.04.019_bib20 article-title: FTIR spectroscopy analysis of Saccharomyces cerevisiae cell walls: study of an anomalous strain exhibiting a pink-colored cell phenotype publication-title: FEMS Microbiol. Lett. doi: 10.1111/j.1574-6968.2001.tb10601.x – volume: 282 start-page: 372 year: 1995 ident: 10.1016/j.bbagen.2005.04.019_bib23 article-title: Comparative classification of Acinetobacter baumannii strains using seven different typing methods publication-title: Zentralbl. Bakteriol. doi: 10.1016/S0934-8840(11)80707-3 – volume: 8 start-page: 462 year: 1995 ident: 10.1016/j.bbagen.2005.04.019_bib8 article-title: New and emerging yeast pathogens publication-title: Clin. Microbiol. Rev. doi: 10.1128/CMR.8.4.462 – volume: 29 start-page: 1164 year: 1999 ident: 10.1016/j.bbagen.2005.04.019_bib9 article-title: The epidemiology of candidemia in two United States cities: results of a population-based active surveillance publication-title: Clin. Infect. Dis. doi: 10.1086/313450 – volume: 6 start-page: 141 year: 2000 ident: 10.1016/j.bbagen.2005.04.019_bib14 article-title: Molecular diagnostics of infectious diseases: state of the technology publication-title: Biotechnol. Annu. Rev. doi: 10.1016/S1387-2656(00)06021-X – volume: 87 start-page: 614 year: 1989 ident: 10.1016/j.bbagen.2005.04.019_bib5 article-title: Risk factors for nosocomial candidemia: a case-control study in adults without leukemia publication-title: Am. J. Med. doi: 10.1016/S0002-9343(89)80392-4 – start-page: 102 year: 2000 ident: 10.1016/j.bbagen.2005.04.019_bib30 article-title: Infrared spectroscopy in microbiology – volume: 7 start-page: 312 year: 2001 ident: 10.1016/j.bbagen.2005.04.019_bib13 article-title: Molecular approaches to diagnosing and managing infectious diseases: practicality and costs publication-title: Emerg. Infect. Dis. doi: 10.3201/eid0702.010234 – start-page: 193 year: 1999 ident: 10.1016/j.bbagen.2005.04.019_bib12 article-title: Manual and automated systems for microbial identification – volume: 41 start-page: 324 year: 2003 ident: 10.1016/j.bbagen.2005.04.019_bib11 article-title: Prospective study of the performance of vibrational spectroscopies for rapid identification of bacterial and fungal pathogens recovered from blood cultures publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.41.1.324-329.2003 – volume: 41 start-page: 954 year: 2003 ident: 10.1016/j.bbagen.2005.04.019_bib19 article-title: Use of Fourier-transform infrared spectroscopy for typing of Candida albicans strains isolated in intensive care units publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.41.3.954-959.2003 – volume: 129 start-page: 1118 year: 2004 ident: 10.1016/j.bbagen.2005.04.019_bib26 article-title: Comparison of diffuse-reflectance absorbance and attenuated total reflectance FT-IR for the discrimination of bacteria publication-title: Analyst doi: 10.1039/b408169b – volume: 232 start-page: 240 year: 1997 ident: 10.1016/j.bbagen.2005.04.019_bib17 article-title: ATR-FTIR spectroscopic investigation of imipenem-susceptible and resistant Pseudomonas aeruginosa isogenic strains publication-title: Biochem. Biophys. Res. Commun. doi: 10.1006/bbrc.1997.6263 – volume: 412 start-page: 39 year: 1997 ident: 10.1016/j.bbagen.2005.04.019_bib18 article-title: ATR-FTIR spectroscopic investigation of E. coli transconjugants β-lactams-resistance phenotype publication-title: FEBS Lett. doi: 10.1016/S0014-5793(97)00725-4 – volume: 22 start-page: S89 year: 1996 ident: 10.1016/j.bbagen.2005.04.019_bib1 article-title: Nosocomial candidiasis: emerging species, reservoirs, and modes of transmission publication-title: Clin. Infect. Dis. doi: 10.1093/clinids/22.Supplement_2.S89 – volume: 289 start-page: 249 year: 1999 ident: 10.1016/j.bbagen.2005.04.019_bib25 article-title: Characterization of nosocomial Serratia marcescens isolates: comparison of Fourier-transform infrared spectroscopy with pulsed-field gel electrophoresis of genomic DNA fragments and multilocus enzyme electrophoresis publication-title: Zentralbl. Bakteriol. doi: 10.1016/S0934-8840(99)80063-2 – volume: 24 start-page: 1122 year: 1997 ident: 10.1016/j.bbagen.2005.04.019_bib2 article-title: The epidemiology of hematogenous candidiasis caused by different Candida species publication-title: Clin. Infect. Dis. doi: 10.1086/513663 – volume: 149 start-page: 2249 year: 1989 ident: 10.1016/j.bbagen.2005.04.019_bib6 article-title: Risk factors for hospital-acquired candidemia: a matched case-control study publication-title: Arch. Intern. Med. doi: 10.1001/archinte.149.10.2349 – volume: 34 start-page: 1846 year: 1996 ident: 10.1016/j.bbagen.2005.04.019_bib27 article-title: Comparison of the new API Candida system to the ID 32C system for identification of clinically important yeast species publication-title: J. Clin. Microbiol. doi: 10.1128/JCM.34.7.1846-1848.1996 |
| SSID | ssj0000595 ssj0025309 |
| Score | 2.1013074 |
| SecondaryResourceType | review_article |
| Snippet | Due to the continuous increase of human candidiasis and the great diversity of yeasts of the
Candida genera, it is indispensable to identify this yeast as... Due to the continuous increase of human candidiasis and the great diversity of yeasts of the Candida genera, it is indispensable to identify this yeast as... |
| SourceID | proquest pubmed crossref elsevier |
| SourceType | Aggregation Database Index Database Enrichment Source Publisher |
| StartPage | 239 |
| SubjectTerms | Candida - classification Candida - growth & development Candida - isolation & purification Candida species Candidiasis - diagnosis Candidiasis - microbiology Early identification Fourier transform-infrared (micro)spectroscopy Humans Microcolony Microscopy - methods Spectroscopy, Fourier Transform Infrared - methods |
| Title | Rapid identification of Candida species by FT-IR microspectroscopy |
| URI | https://dx.doi.org/10.1016/j.bbagen.2005.04.019 https://www.ncbi.nlm.nih.gov/pubmed/15951116 https://www.proquest.com/docview/68452069 |
| Volume | 1724 |
| WOSCitedRecordID | wos000231187100004&url=https%3A%2F%2Fcvtisr.summon.serialssolutions.com%2F%23%21%2Fsearch%3Fho%3Df%26include.ft.matches%3Dt%26l%3Dnull%26q%3D |
| hasFullText | 1 |
| inHoldings | 1 |
| isFullTextHit | |
| isPrint | |
| journalDatabaseRights | – providerCode: PRVESC databaseName: ScienceDirect database customDbUrl: eissn: 1872-8006 dateEnd: 99991231 omitProxy: false ssIdentifier: ssj0000595 issn: 0304-4165 databaseCode: AIEXJ dateStart: 19950118 isFulltext: true titleUrlDefault: https://www.sciencedirect.com providerName: Elsevier |
| link | http://cvtisr.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwtV1bb5swFLaydtP2Mm3drbt0POwNERkw2Dx2Uau1WqOoyqa8IduYlqqDqAlVux-037ljbKBZ1HV92AsKyLYczsfx5-NzQegTADcLKMOewlh6hHNfG5q4lwlf-TjDUjYnut-_0vGYzWbJZDD41cbCXJ7TsmRXV8n8v4oanoGwdejsPcTdDQoP4DcIHa4gdrj-k-CP-bzI3CKzbkAdJRzpAJaMuzq2ErbHmnfuT72DY_eH9slrIi51ZstqvnrQW1TytNA5BVy1dEVRGVMI10k4-LDNWu0uaqENOj1BX2iTdVWLxlngqDrVBvKsN2nXglv-rnObGMdv67ZY_-QnJ1Xd9eu7TYrS-AgcKl56xol1xWoRNT5z0Q3lFmLiARmMVjQxNfHUFnPhTcVqUh7ZNTowWTrX1L-xRJwNhYBWpbWYkSG2Wnkl2_Yfq2Dnm9i6vZ2lZhRdqDNKMUmxzi67GdAoAe25uXuwNzvs1_yoqe_T_as2SLPxJFyfzW0k6LZNTkN2ps_QU7tLcXYNup6jgSq30CNTt_R6Cz0etWUCX6DPDd6cVbw5Ve5YvDkWb464dhq8OWt4e4m-7e9NR188W5jDk2GMl7AocaDZgQpjwqTKKc6ZxIoEkiWSBITlPIGdQs5zldGI5jjGoQhjSgTLSJiFefgKbQBg1Bvk0FxyQfQgGTBhIRLCdQkCHxPFOBH-NgrbN5VKm7VeF085T_8mp23kdb3mJmvLHe1pK4TUMk_DKFNA1h09P7YyS-HF69M2XqqqXqQxI1GAY2jx2oiynwmABShG_Paes3yHnvSf0nu0sbyo1Qf0UF4ui8XFDnpAZ2zHAhPuxpOj35JPvLI |
| linkProvider | Elsevier |
| openUrl | ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Rapid+identification+of+Candida+species+by+FT-IR+microspectroscopy&rft.jtitle=Biochimica+et+biophysica+acta.+General+subjects&rft.au=Essendoubi%2C+Mohammed&rft.au=Toubas%2C+Dominique&rft.au=Bouzaggou%2C+Mohamed&rft.au=Pinon%2C+Jean-Michel&rft.date=2005-08-05&rft.issn=0304-4165&rft.volume=1724&rft.issue=3&rft.spage=239&rft.epage=247&rft_id=info:doi/10.1016%2Fj.bbagen.2005.04.019&rft.externalDBID=n%2Fa&rft.externalDocID=10_1016_j_bbagen_2005_04_019 |
| thumbnail_l | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=0304-4165&client=summon |
| thumbnail_m | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=0304-4165&client=summon |
| thumbnail_s | http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=0304-4165&client=summon |