Segmentation of breast anatomy for automated whole breast ultrasound images with boundary regularized convolutional encoder–decoder network
The segmentation of breast anatomical layers in the noisy Automated Whole Breast Ultrasound (AWBUS) images is a very challenging task. A boundary regularized deep convolutional encoder–decoder network (ConvEDNet) is proposed here to address this challenge. The training of ConvEDNet is regularized by...
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| Published in: | Neurocomputing (Amsterdam) Vol. 321; pp. 178 - 186 |
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| Main Authors: | , , , , , , |
| Format: | Journal Article |
| Language: | English |
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Elsevier B.V
10.12.2018
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| ISSN: | 0925-2312, 1872-8286 |
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| Abstract | The segmentation of breast anatomical layers in the noisy Automated Whole Breast Ultrasound (AWBUS) images is a very challenging task. A boundary regularized deep convolutional encoder–decoder network (ConvEDNet) is proposed here to address this challenge. The training of ConvEDNet is regularized by the boundary cues, which carry geometrical constraints, with the deep supervision technique for better withstand of intrinsic speckle noise and posterior acoustic shadows in ultrasound images. The boundary regularization is denoted as deep boundary supervision (DBS) throughout this paper. The training of the ConvEDNet is further boosted with the adaptive domain transfer (ADT), which is realized with the bridge of encoder training for an edge detector on ultrasound images. Accordingly, the ADT is a two-stage of domain transfer for better landing the encoder on the ultrasound domain. The ADT can provide better network initialization than either the direct usage of pretrained model from natural images or random scratch. Based on the ADT and DBS techniques, the proposed ConvEDNet method achieves better segmentation performance compared with several classic deep learning segmentation methods on the same set of AWBUS images. The segmentation of breast anatomy may potentially assist the exclusion of false-positives for computer-aided detection to further improve the efficiency of clinical image reading. |
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| AbstractList | The segmentation of breast anatomical layers in the noisy Automated Whole Breast Ultrasound (AWBUS) images is a very challenging task. A boundary regularized deep convolutional encoder–decoder network (ConvEDNet) is proposed here to address this challenge. The training of ConvEDNet is regularized by the boundary cues, which carry geometrical constraints, with the deep supervision technique for better withstand of intrinsic speckle noise and posterior acoustic shadows in ultrasound images. The boundary regularization is denoted as deep boundary supervision (DBS) throughout this paper. The training of the ConvEDNet is further boosted with the adaptive domain transfer (ADT), which is realized with the bridge of encoder training for an edge detector on ultrasound images. Accordingly, the ADT is a two-stage of domain transfer for better landing the encoder on the ultrasound domain. The ADT can provide better network initialization than either the direct usage of pretrained model from natural images or random scratch. Based on the ADT and DBS techniques, the proposed ConvEDNet method achieves better segmentation performance compared with several classic deep learning segmentation methods on the same set of AWBUS images. The segmentation of breast anatomy may potentially assist the exclusion of false-positives for computer-aided detection to further improve the efficiency of clinical image reading. |
| Author | Huang, Shan Bian, Cheng Li, Hang Chou, Yi-Hong Cheng, Jie-Zhi Li, Ran Lei, Baiying |
| Author_xml | – sequence: 1 givenname: Baiying surname: Lei fullname: Lei, Baiying organization: School of Biomedical Engineering, Health Science Center, Shenzhen University, National–Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, Nanhai Ave 3688, 518060 Shenzhen, Guangdong, China – sequence: 2 givenname: Shan surname: Huang fullname: Huang, Shan organization: School of Biomedical Engineering, Health Science Center, Shenzhen University, National–Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, Nanhai Ave 3688, 518060 Shenzhen, Guangdong, China – sequence: 3 givenname: Ran surname: Li fullname: Li, Ran organization: School of Biomedical Engineering, Health Science Center, Shenzhen University, National–Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, Nanhai Ave 3688, 518060 Shenzhen, Guangdong, China – sequence: 4 givenname: Cheng surname: Bian fullname: Bian, Cheng organization: School of Biomedical Engineering, Health Science Center, Shenzhen University, National–Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, Nanhai Ave 3688, 518060 Shenzhen, Guangdong, China – sequence: 5 givenname: Hang surname: Li fullname: Li, Hang organization: School of Biomedical Engineering, Health Science Center, Shenzhen University, National–Regional Key Technology Engineering Laboratory for Medical Ultrasound, Guangdong Key Laboratory for Biomedical Measurements and Ultrasound Imaging, Nanhai Ave 3688, 518060 Shenzhen, Guangdong, China – sequence: 6 givenname: Yi-Hong orcidid: 0000-0002-7418-4514 surname: Chou fullname: Chou, Yi-Hong organization: Department of Radiology, Taipei Veterans General Hospital, Taipei, Taiwan – sequence: 7 givenname: Jie-Zhi surname: Cheng fullname: Cheng, Jie-Zhi email: jzcheng@ntu.edu.tw, leiby@szu.edu.cn, leib0001@e.ntu.edu.sg organization: Shanghai United Imaging Intelligence Co., Ltd. (UII), Shanghai, China |
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| Keywords | Adaptive domain transfer Segmentation Deep supervision Convolutional neural network Breast ultrasound |
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