Highly parallel simulation tool for the design of isotachophoresis experiments
Isotachophoresis (ITP) is a well-established electrokinetic method for separation and preconcentration of analytes. Several simulation tools for ITP have been published, but their use for experimental design is limited by the computational time for a single run and/or by the number of conditions tha...
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| Vydáno v: | Analytica chimica acta Ročník 1337; s. 343553 |
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| Hlavní autoři: | , , , , |
| Médium: | Journal Article |
| Jazyk: | angličtina |
| Vydáno: |
Netherlands
Elsevier B.V
01.02.2025
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| Témata: | |
| ISSN: | 0003-2670, 1873-4324, 1873-4324 |
| On-line přístup: | Získat plný text |
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| Shrnutí: | Isotachophoresis (ITP) is a well-established electrokinetic method for separation and preconcentration of analytes. Several simulation tools for ITP have been published, but their use for experimental design is limited by the computational time for a single run and/or by the number of conditions that can be investigated per simulation run. A large fraction of the existing solvers also do not account for ionic strength effects, which can influence whether an analyte focuses in ITP. There is currently no publicly available tool for the easy and rapid design of ITP experiments.
We present a rapid, highly parallelized steady-state solver for the design of buffer electrolytes in ITP experiments. The tool is called Browser-based Electrolyte Analyses for ITP (BEAN). BEAN is designed to facilitate the evaluation and identification of functional buffer chemistries for ITP. Given a user-defined chemistry system, BEAN solves a set of coupled, non-linear integral conservation equations to determine whether a specific analyte is focused by the ITP system, and estimates quantities of interest in the design of related ITP processes. These quantities include zone concentrations, pH, and effective (observable) mobility values. BEAN also computes 972 variations of the specified ITP chemistry, including a broad range of buffer titrations and ion mobilities. All the calculations performed in BEAN include ionic strength and finite ionic radius effects, and the solver handles species with arbitrary valence. The tool further includes a searchable database of 521 commonly used electrolytes. BEAN is available at microfluidics.stanford.edu/bean.
This study introduces a novel tool that integrates known ITP steady-state equations with a highly parallel computational framework, an electrolyte database, and a web-based interface. BEAN requires no license nor compilation, and its parallel computations are performed automatically without specific implementation needed from the user. This enables users to screen wide ranges of experimental conditions in the design of ITP experiments.
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•We introduce a new online simulation tool to design isotachophoresis experiments.•The tool includes an electrolyte database and accounts for ionic strength effects.•The tool provides an effective mobility vs. pH plot to review focusing conditions.•Users can benchmark 972 variations of chemistry to optimize their system.•Parallel simulations are implemented using AWS cloud computing. |
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| Bibliografie: | ObjectType-Article-1 SourceType-Scholarly Journals-1 ObjectType-Feature-2 content type line 23 |
| ISSN: | 0003-2670 1873-4324 1873-4324 |
| DOI: | 10.1016/j.aca.2024.343553 |