Efficient Encoding/Decoding of GC-Balanced Codes Correcting Tandem Duplications

Tandem duplication is the process of inserting a copy of a segment of DNA adjacent to the original position. Motivated by applications that store data in living organisms, Jain et al. (2017) proposed the study of codes that correct tandem duplications. All code constructions are based on irreducible...

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Bibliographic Details
Published in:	IEEE transactions on information theory Vol. 66; no. 8; pp. 4892 - 4903
Main Authors:	Chee, Yeow Meng, Chrisnata, Johan, Kiah, Han Mao, Nguyen, Tuan Thanh
Format:	Journal Article
Language:	English
Published:	New York IEEE 01.08.2020 The Institute of Electrical and Electronics Engineers, Inc. (IEEE)
Subjects:	3G mobile communication Algorithms Alphabets Biological information theory Coders Codes DNA DNA storage Encoders-Decoders Encoding Encoding-Decoding Error-correction codes GC-balanced codes In vivo Organisms Reproduction (copying) Sequential analysis tandem duplication Words (language)
ISSN:	0018-9448, 1557-9654
Online Access:	Get full text
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