Adaptive k-sparse constrained dictionary learning strategy for bioluminescence tomography reconstruction

. Bioluminescence tomography (BLT) is a significant molecular imaging modality with promising potential in biomedical research. However, the reconstruction results of BLT are frequently sensitive and imprecise due to the light scattering effect and ill-posed inverse problem. . We propose an accelera...

Full description

Saved in:
Bibliographic Details
Published in:Physics in medicine & biology Vol. 70; no. 20
Main Authors: Yang, Bianbian, He, Yiting, Cai, Nannan, Chen, Yi, Yi, Huangjian, Hao, Xingxing, Gao, Chengyi, Cao, Xin
Format: Journal Article
Language:English
Published: England 19.10.2025
Subjects:
ISSN:1361-6560, 1361-6560
Online Access:Get more information
Tags: Add Tag
No Tags, Be the first to tag this record!
Abstract . Bioluminescence tomography (BLT) is a significant molecular imaging modality with promising potential in biomedical research. However, the reconstruction results of BLT are frequently sensitive and imprecise due to the light scattering effect and ill-posed inverse problem. . We propose an accelerated forward-backward splitting and the difference of convex functions algorithm (AFBS-DCA) based on a dictionary learning framework. In the sparse coding phase, a k-sparsity strategy enables adaptive adjustment of the regularization parameter, improving the overall efficiency. The non-convex generalized minimax-concave regularization is employed to enhance sparsity, while Nesterov's acceleration strategy improves convergence speed. During dictionary updating, DCA is utilized to efficiently solve a non-convex optimization problem modelled as a difference of two convex functions, effectively reducing computational complexity. . The effectiveness of the AFBS-DCA method was evaluated through numerical simulations and light source implantation experiments. It achieved the highest reconstruction accuracy with an average localization error of 0.391 mm, an average Dice coefficient (DICE) of 0.774, and a contrast-to-noise ratio of 0.872. Compared with three baseline methods, the AFBS-DCA reduced reconstruction errors by 62.8%, 52.5%, and 37.8%, respectively. . The proposed AFBS-DCA method demonstrates superior performance in terms of localization accuracy, morphological recovery, and robustness, indicating its potential to advance the practical application of BLT in biomedical research and molecular imaging.
AbstractList . Bioluminescence tomography (BLT) is a significant molecular imaging modality with promising potential in biomedical research. However, the reconstruction results of BLT are frequently sensitive and imprecise due to the light scattering effect and ill-posed inverse problem. . We propose an accelerated forward-backward splitting and the difference of convex functions algorithm (AFBS-DCA) based on a dictionary learning framework. In the sparse coding phase, a k-sparsity strategy enables adaptive adjustment of the regularization parameter, improving the overall efficiency. The non-convex generalized minimax-concave regularization is employed to enhance sparsity, while Nesterov's acceleration strategy improves convergence speed. During dictionary updating, DCA is utilized to efficiently solve a non-convex optimization problem modelled as a difference of two convex functions, effectively reducing computational complexity. . The effectiveness of the AFBS-DCA method was evaluated through numerical simulations and light source implantation experiments. It achieved the highest reconstruction accuracy with an average localization error of 0.391 mm, an average Dice coefficient (DICE) of 0.774, and a contrast-to-noise ratio of 0.872. Compared with three baseline methods, the AFBS-DCA reduced reconstruction errors by 62.8%, 52.5%, and 37.8%, respectively. . The proposed AFBS-DCA method demonstrates superior performance in terms of localization accuracy, morphological recovery, and robustness, indicating its potential to advance the practical application of BLT in biomedical research and molecular imaging.
Bioluminescence tomography (BLT) is a significant molecular imaging modality with promising potential in biomedical research. However, the reconstruction results of BLT are frequently sensitive and imprecise due to the light scattering effect and ill-posed inverse problem.OBJECTIVEBioluminescence tomography (BLT) is a significant molecular imaging modality with promising potential in biomedical research. However, the reconstruction results of BLT are frequently sensitive and imprecise due to the light scattering effect and ill-posed inverse problem.We propose an accelerated forward-backward splitting and the difference of convex functions algorithm (AFBS-DCA) based on a dictionary learning framework. In the sparse coding phase, a k-sparsity strategy enables adaptive adjustment of the regularization parameter, improving the overall efficiency. The non-convex generalized minimax-concave (GMC) regularization is employed to enhance sparsity, while Nesterov's acceleration strategy improves convergence speed. During dictionary updating, DCA is utilized to efficiently solve a non-convex optimization problem modelled as a difference of two convex functions, effectively reducing computational complexity.APPROACHWe propose an accelerated forward-backward splitting and the difference of convex functions algorithm (AFBS-DCA) based on a dictionary learning framework. In the sparse coding phase, a k-sparsity strategy enables adaptive adjustment of the regularization parameter, improving the overall efficiency. The non-convex generalized minimax-concave (GMC) regularization is employed to enhance sparsity, while Nesterov's acceleration strategy improves convergence speed. During dictionary updating, DCA is utilized to efficiently solve a non-convex optimization problem modelled as a difference of two convex functions, effectively reducing computational complexity.The effectiveness of the AFBS-DCA method was evaluated through numerical simulations and light source implantation experiments. It achieved the highest reconstruction accuracy with an average localization error (LE) of 0.391 mm, an average Dice coefficient (DICE) of 0.774, and a contrast-to-noise ratio (CNR) of 0.872. Compared with three baseline methods, the AFBS-DCA reduced reconstruction errors by 62.8%, 52.5%, and 37.8%, respectively.MAIN RESULTSThe effectiveness of the AFBS-DCA method was evaluated through numerical simulations and light source implantation experiments. It achieved the highest reconstruction accuracy with an average localization error (LE) of 0.391 mm, an average Dice coefficient (DICE) of 0.774, and a contrast-to-noise ratio (CNR) of 0.872. Compared with three baseline methods, the AFBS-DCA reduced reconstruction errors by 62.8%, 52.5%, and 37.8%, respectively.The proposed AFBS-DCA method demonstrates superior performance in terms of localization accuracy, morphological recovery, and robustness, indicating its potential to advance the practical application of BLT in biomedical research and molecular imaging.SIGNIFICANCEThe proposed AFBS-DCA method demonstrates superior performance in terms of localization accuracy, morphological recovery, and robustness, indicating its potential to advance the practical application of BLT in biomedical research and molecular imaging.
Author Cai, Nannan
Chen, Yi
Hao, Xingxing
Yang, Bianbian
Gao, Chengyi
Cao, Xin
Yi, Huangjian
He, Yiting
Author_xml – sequence: 1
  givenname: Bianbian
  surname: Yang
  fullname: Yang, Bianbian
  organization: School of Information Science and Technology, Northwest University, Xi'an, Shaanxi 710127, People's Republic of China
– sequence: 2
  givenname: Yiting
  surname: He
  fullname: He, Yiting
  organization: School of Information Science and Technology, Northwest University, Xi'an, Shaanxi 710127, People's Republic of China
– sequence: 3
  givenname: Nannan
  surname: Cai
  fullname: Cai, Nannan
  organization: School of Information Science and Technology, Northwest University, Xi'an, Shaanxi 710127, People's Republic of China
– sequence: 4
  givenname: Yi
  surname: Chen
  fullname: Chen, Yi
  organization: School of Electrical and Mechanical Engineering, The University of Adelaide, Adelaide, SA 5005, Australia
– sequence: 5
  givenname: Huangjian
  surname: Yi
  fullname: Yi, Huangjian
  organization: School of Information Science and Technology, Northwest University, Xi'an, Shaanxi 710127, People's Republic of China
– sequence: 6
  givenname: Xingxing
  surname: Hao
  fullname: Hao, Xingxing
  organization: School of Information Science and Technology, Northwest University, Xi'an, Shaanxi 710127, People's Republic of China
– sequence: 7
  givenname: Chengyi
  surname: Gao
  fullname: Gao, Chengyi
  organization: Department of Oncology, The First Affiliated Hospital, Xi'an Jiaotong University, Xi'an, Shaanxi 710061, People's Republic of China
– sequence: 8
  givenname: Xin
  orcidid: 0000-0003-3560-6523
  surname: Cao
  fullname: Cao, Xin
  organization: School of Information Science and Technology, Northwest University, Xi'an, Shaanxi 710127, People's Republic of China
BackLink https://www.ncbi.nlm.nih.gov/pubmed/41005351$$D View this record in MEDLINE/PubMed
BookMark eNpNkE1PwzAMhiM0xD7gzgnlyKUscdOuPU4TX9IkLnCu0sTdAm1Skhap_56ODcTJlv3o0WvPycQ6i4Rcc3bHWZYteZzyKE1StpTIVMLPyOxvNPnXT8k8hHfGOM9AXJCp4IwlccJnZL_Wsu3MF9KPKLTSB6TK2dB5aSxqqo3qjLPSD7RG6a2xO3pYdrgbaOU8LY2r-2Zkg0KrkHaucTsv2_1APR5N_Y_ikpxXsg54daoL8vZw_7p5irYvj8-b9TZSkPMu0mnJKjhk1pzlEsoYhUhliaXAFcdErHQOGmRSVirVCjPAqgIFMcZaixhgQW6P3ta7zx5DVzRmzFbX0qLrQxFDInLgAGxEb05oXzaoi9abZry0-P0OfAOphGxs
ContentType Journal Article
Copyright 2025 Institute of Physics and Engineering in Medicine. All rights, including for text and data mining, AI training, and similar technologies, are reserved.
Copyright_xml – notice: 2025 Institute of Physics and Engineering in Medicine. All rights, including for text and data mining, AI training, and similar technologies, are reserved.
DBID CGR
CUY
CVF
ECM
EIF
NPM
7X8
DOI 10.1088/1361-6560/ae0c51
DatabaseName Medline
MEDLINE
MEDLINE (Ovid)
MEDLINE
MEDLINE
PubMed
MEDLINE - Academic
DatabaseTitle MEDLINE
Medline Complete
MEDLINE with Full Text
PubMed
MEDLINE (Ovid)
MEDLINE - Academic
DatabaseTitleList MEDLINE
MEDLINE - Academic
Database_xml – sequence: 1
  dbid: NPM
  name: PubMed
  url: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed
  sourceTypes: Index Database
– sequence: 2
  dbid: 7X8
  name: MEDLINE - Academic
  url: https://search.proquest.com/medline
  sourceTypes: Aggregation Database
DeliveryMethod no_fulltext_linktorsrc
Discipline Medicine
Biology
Physics
EISSN 1361-6560
ExternalDocumentID 41005351
Genre Journal Article
GroupedDBID ---
-DZ
-~X
123
1JI
4.4
5B3
5RE
5VS
5ZH
7.M
7.Q
AAGCD
AAJIO
AAJKP
AATNI
ABCXL
ABHWH
ABJNI
ABLJU
ABQJV
ABUFD
ABVAM
ACAFW
ACGFS
ACHIP
ADEQX
AEFHF
AEINN
AENEX
AFYNE
AKPSB
ALMA_UNASSIGNED_HOLDINGS
AOAED
ASPBG
ATQHT
AVWKF
AZFZN
CBCFC
CEBXE
CGR
CJUJL
CRLBU
CS3
CUY
CVF
DU5
EBS
ECM
EDWGO
EIF
EJD
EMSAF
EPQRW
EQZZN
F5P
IHE
IJHAN
IOP
IZVLO
KOT
LAP
N5L
N9A
NPM
P2P
PJBAE
R4D
RIN
RNS
RO9
ROL
RPA
SY9
TN5
W28
XPP
7X8
ID FETCH-LOGICAL-c291t-d6b0f26560d109a2b3e446abeb4e71e547d92d2a5bfc6dce82eff2c23e3dd4322
IEDL.DBID 7X8
ISICitedReferencesCount 0
ISICitedReferencesURI http://www.webofscience.com/api/gateway?GWVersion=2&SrcApp=Summon&SrcAuth=ProQuest&DestLinkType=CitingArticles&DestApp=WOS_CPL&KeyUT=001590332300001&url=https%3A%2F%2Fcvtisr.summon.serialssolutions.com%2F%23%21%2Fsearch%3Fho%3Df%26include.ft.matches%3Dt%26l%3Dnull%26q%3D
ISSN 1361-6560
IngestDate Sat Sep 27 17:45:38 EDT 2025
Fri Oct 10 01:53:17 EDT 2025
IsPeerReviewed true
IsScholarly true
Issue 20
Keywords dictionary learning framework
k-sparsity strategy
inverse problem
bioluminescence tomography
Language English
License 2025 Institute of Physics and Engineering in Medicine. All rights, including for text and data mining, AI training, and similar technologies, are reserved.
LinkModel DirectLink
MergedId FETCHMERGED-LOGICAL-c291t-d6b0f26560d109a2b3e446abeb4e71e547d92d2a5bfc6dce82eff2c23e3dd4322
Notes ObjectType-Article-1
SourceType-Scholarly Journals-1
ObjectType-Feature-2
content type line 23
ORCID 0000-0003-3560-6523
PMID 41005351
PQID 3254921220
PQPubID 23479
ParticipantIDs proquest_miscellaneous_3254921220
pubmed_primary_41005351
PublicationCentury 2000
PublicationDate 2025-10-19
PublicationDateYYYYMMDD 2025-10-19
PublicationDate_xml – month: 10
  year: 2025
  text: 2025-10-19
  day: 19
PublicationDecade 2020
PublicationPlace England
PublicationPlace_xml – name: England
PublicationTitle Physics in medicine & biology
PublicationTitleAlternate Phys Med Biol
PublicationYear 2025
SSID ssj0011824
Score 2.4831822
Snippet . Bioluminescence tomography (BLT) is a significant molecular imaging modality with promising potential in biomedical research. However, the reconstruction...
Bioluminescence tomography (BLT) is a significant molecular imaging modality with promising potential in biomedical research. However, the reconstruction...
SourceID proquest
pubmed
SourceType Aggregation Database
Index Database
SubjectTerms Algorithms
Image Processing, Computer-Assisted - methods
Luminescent Measurements - methods
Machine Learning
Tomography - methods
Title Adaptive k-sparse constrained dictionary learning strategy for bioluminescence tomography reconstruction
URI https://www.ncbi.nlm.nih.gov/pubmed/41005351
https://www.proquest.com/docview/3254921220
Volume 70
WOSCitedRecordID wos001590332300001&url=https%3A%2F%2Fcvtisr.summon.serialssolutions.com%2F%23%21%2Fsearch%3Fho%3Df%26include.ft.matches%3Dt%26l%3Dnull%26q%3D
hasFullText
inHoldings 1
isFullTextHit
isPrint
link http://cvtisr.summon.serialssolutions.com/2.0.0/link/0/eLvHCXMwpV1LS8NAEF7Uqnjx_X6wgtfQ7CbZmJOIKF5aelDoLexjokVMalOF_ntnkrU9CYKXHBYSwu7sl292Jt_H2JVKFTnSFAEo3G4xIIfTYHUQWi1MkYVWJUVjNpH2-9fDYTbwB261b6v8wcQGqF1l6Yy8G1Emgzgrw5vxR0CuUVRd9RYay6wTIZWhlq50uKgiIHduTW2VCEhkxpcpcWN152NdDaFNxO8Es_nQPGz99xW32aanmPy2jYkdtgTlLltrTSdnu2y958vpONj0f9p6j73eOj0m5ONvAWLMpAZuiTmSgQQ47kbN7w96MuPeZuKF162u7Ywj7eWk5fT5Ti30lqCCT6t3r4XNm5R7LlO7z54f7p_uHgNvwhBYmYlp4JQJC0kz5USYaWkiwAxSGzAxpAKSOHWZdFInprDKWVxsKAppZQSRczHCxQFbKasSjhhHqmhUYg0-2MYaeRlmRxFolcjYuFhcH7PLn3nNMcipcqFLqD7rfDGzx-ywXZx83Kpx5LFoNGrEyR_uPmUbkvx7qSMlO2OdArc4nLNV-zUd1ZOLJnrw2h_0vgGCfdGI
linkProvider ProQuest
openUrl ctx_ver=Z39.88-2004&ctx_enc=info%3Aofi%2Fenc%3AUTF-8&rfr_id=info%3Asid%2Fsummon.serialssolutions.com&rft_val_fmt=info%3Aofi%2Ffmt%3Akev%3Amtx%3Ajournal&rft.genre=article&rft.atitle=Adaptive+k-sparse+constrained+dictionary+learning+strategy+for+bioluminescence+tomography+reconstruction&rft.jtitle=Physics+in+medicine+%26+biology&rft.au=Yang%2C+Bianbian&rft.au=He%2C+Yiting&rft.au=Cai%2C+Nannan&rft.au=Chen%2C+Yi&rft.date=2025-10-19&rft.eissn=1361-6560&rft.volume=70&rft.issue=20&rft_id=info:doi/10.1088%2F1361-6560%2Fae0c51&rft_id=info%3Apmid%2F41005351&rft_id=info%3Apmid%2F41005351&rft.externalDocID=41005351
thumbnail_l http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/lc.gif&issn=1361-6560&client=summon
thumbnail_m http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/mc.gif&issn=1361-6560&client=summon
thumbnail_s http://covers-cdn.summon.serialssolutions.com/index.aspx?isbn=/sc.gif&issn=1361-6560&client=summon