Molecular characterization of allelic variants of (GATA) n microsatellite loci in parthenogenetic lizards Darevskia unisexualis (Lacertidae)
Populations of parthenogenetic lizards of the genus Darevskia consist of genetically identical animals, and represent a unique model for studying the molecular mechanisms underlying the variability and evolution of hypervariable DNA repeats. As unisexual lineages, parthenogenetic lizards are charact...
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| Vydáno v: | Gene Ročník 392; číslo 1; s. 126 - 133 |
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| Médium: | Journal Article |
| Jazyk: | angličtina |
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Elsevier B.V
01.05.2007
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| ISSN: | 0378-1119, 1879-0038 |
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| Abstract | Populations of parthenogenetic lizards of the genus
Darevskia consist of genetically identical animals, and represent a unique model for studying the molecular mechanisms underlying the variability and evolution of hypervariable DNA repeats. As unisexual lineages, parthenogenetic lizards are characterized by some level of genetic diversity at microsatellite loci. We cloned and sequenced a number of (GATA)
n
microsatellite loci of
Darevskia unisexualis. PCR products from these loci were also sequenced and the degree of intraspecific polymorphism was assessed. Among the five (GATA)
n
loci analysed, two (Du215 and Du281) were polymorphic. Cross-species analysis of Du215 and Du281 indicate that the priming sites at the
D. unisexualis loci are conserved in the bisexual parental species,
D. raddei and
D. valentini. Sequencing the PCR products amplified from Du215 and Du281 and from monomorphic Du323 showed that allelic differences at the polymorphic loci are caused by microsatellite mutations and by point mutations in the flanking regions. The haplotypes identified among the allelic variants of Du281 and among its orthologues in the parental species provide new evidence of the cross-species origin of
D. unisexualis. To our knowledge, these data are the first to characterize the nucleotide sequences of allelic variants at microsatellite loci within parthenogenetic vertebrate animals. |
|---|---|
| AbstractList | Populations of parthenogenetic lizards of the genus Darevskia consist of genetically identical animals, and represent a unique model for studying the molecular mechanisms underlying the variability and evolution of hypervariable DNA repeats. As unisexual lineages, parthenogenetic lizards are characterized by some level of genetic diversity at microsatellite loci. We cloned and sequenced a number of (GATA)n microsatellite loci of Darevskia unisexualis. PCR products from these loci were also sequenced and the degree of intraspecific polymorphism was assessed. Among the five (GATA)n loci analysed, two (Du215 and Du281) were polymorphic. Cross-species analysis of Du215 and Du281 indicate that the priming sites at the D. unisexualis loci are conserved in the bisexual parental species, D. raddei and D. valentini. Sequencing the PCR products amplified from Du215 and Du281 and from monomorphic Du323 showed that allelic differences at the polymorphic loci are caused by microsatellite mutations and by point mutations in the flanking regions. The haplotypes identified among the allelic variants of Du281 and among its orthologues in the parental species provide new evidence of the cross-species origin of D. unisexualis. To our knowledge, these data are the first to characterize the nucleotide sequences of allelic variants at microsatellite loci within parthenogenetic vertebrate animals. Populations of parthenogenetic lizards of the genus Darevskia consist of genetically identical animals, and represent a unique model for studying the molecular mechanisms underlying the variability and evolution of hypervariable DNA repeats. As unisexual lineages, parthenogenetic lizards are characterized by some level of genetic diversity at microsatellite loci. We cloned and sequenced a number of (GATA)n microsatellite loci of Darevskia unisexualis. PCR products from these loci were also sequenced and the degree of intraspecific polymorphism was assessed. Among the five (GATA)n loci analysed, two (Du215 and Du281) were polymorphic. Cross-species analysis of Du215 and Du281 indicate that the priming sites at the D. unisexualis loci are conserved in the bisexual parental species, D. raddei and D. valentini. Sequencing the PCR products amplified from Du215 and Du281 and from monomorphic Du323 showed that allelic differences at the polymorphic loci are caused by microsatellite mutations and by point mutations in the flanking regions. The haplotypes identified among the allelic variants of Du281 and among its orthologues in the parental species provide new evidence of the cross-species origin of D. unisexualis. To our knowledge, these data are the first to characterize the nucleotide sequences of allelic variants at microsatellite loci within parthenogenetic vertebrate animals.Populations of parthenogenetic lizards of the genus Darevskia consist of genetically identical animals, and represent a unique model for studying the molecular mechanisms underlying the variability and evolution of hypervariable DNA repeats. As unisexual lineages, parthenogenetic lizards are characterized by some level of genetic diversity at microsatellite loci. We cloned and sequenced a number of (GATA)n microsatellite loci of Darevskia unisexualis. PCR products from these loci were also sequenced and the degree of intraspecific polymorphism was assessed. Among the five (GATA)n loci analysed, two (Du215 and Du281) were polymorphic. Cross-species analysis of Du215 and Du281 indicate that the priming sites at the D. unisexualis loci are conserved in the bisexual parental species, D. raddei and D. valentini. Sequencing the PCR products amplified from Du215 and Du281 and from monomorphic Du323 showed that allelic differences at the polymorphic loci are caused by microsatellite mutations and by point mutations in the flanking regions. The haplotypes identified among the allelic variants of Du281 and among its orthologues in the parental species provide new evidence of the cross-species origin of D. unisexualis. To our knowledge, these data are the first to characterize the nucleotide sequences of allelic variants at microsatellite loci within parthenogenetic vertebrate animals. Populations of parthenogenetic lizards of the genus Darevskia consist of genetically identical animals, and represent a unique model for studying the molecular mechanisms underlying the variability and evolution of hypervariable DNA repeats. As unisexual lineages, parthenogenetic lizards are characterized by some level of genetic diversity at microsatellite loci. We cloned and sequenced a number of (GATA) n microsatellite loci of Darevskia unisexualis. PCR products from these loci were also sequenced and the degree of intraspecific polymorphism was assessed. Among the five (GATA) n loci analysed, two (Du215 and Du281) were polymorphic. Cross-species analysis of Du215 and Du281 indicate that the priming sites at the D. unisexualis loci are conserved in the bisexual parental species, D. raddei and D. valentini. Sequencing the PCR products amplified from Du215 and Du281 and from monomorphic Du323 showed that allelic differences at the polymorphic loci are caused by microsatellite mutations and by point mutations in the flanking regions. The haplotypes identified among the allelic variants of Du281 and among its orthologues in the parental species provide new evidence of the cross-species origin of D. unisexualis. To our knowledge, these data are the first to characterize the nucleotide sequences of allelic variants at microsatellite loci within parthenogenetic vertebrate animals. |
| Author | Darevsky, I.S. Ryskov, A.P. Korchagin, V.I. Tokarskaya, O.N. Badaeva, T.N. Martirosyan, I.A. |
| Author_xml | – sequence: 1 givenname: V.I. surname: Korchagin fullname: Korchagin, V.I. email: vitaly_korchagin@rambler.ru organization: Institute of Gene Biology, Russian Academy of Sciences, Moscow, 119334, Russia – sequence: 2 givenname: T.N. surname: Badaeva fullname: Badaeva, T.N. organization: Institute of Gene Biology, Russian Academy of Sciences, Moscow, 119334, Russia – sequence: 3 givenname: O.N. surname: Tokarskaya fullname: Tokarskaya, O.N. organization: Institute of Gene Biology, Russian Academy of Sciences, Moscow, 119334, Russia – sequence: 4 givenname: I.A. surname: Martirosyan fullname: Martirosyan, I.A. organization: Institute of Gene Biology, Russian Academy of Sciences, Moscow, 119334, Russia – sequence: 5 givenname: I.S. surname: Darevsky fullname: Darevsky, I.S. organization: Zoological Institute, Russian Academy of Sciences, St.-Petersburg, 199034, Russia – sequence: 6 givenname: A.P. surname: Ryskov fullname: Ryskov, A.P. organization: Institute of Gene Biology, Russian Academy of Sciences, Moscow, 119334, Russia |
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| Keywords | Repetitive DNA AMP Microsatellite mutations Genome diversity Tc X-Gal DEAE paper Allelic sequence variations LB Unisexual vertebrates IPTG PCR RFLP |
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Darevskia consist of genetically identical animals, and represent a unique model for studying the molecular... Populations of parthenogenetic lizards of the genus Darevskia consist of genetically identical animals, and represent a unique model for studying the molecular... |
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| SubjectTerms | Alleles Allelic sequence variations Animals Base Sequence GATA Transcription Factors - genetics Genetic Variation Genome diversity Lizards - genetics Microsatellite mutations Microsatellite Repeats Molecular Sequence Data Parthenogenesis - genetics Repetitive DNA Sequence Homology, Nucleic Acid Unisexual vertebrates |
| Title | Molecular characterization of allelic variants of (GATA) n microsatellite loci in parthenogenetic lizards Darevskia unisexualis (Lacertidae) |
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