DeepUTF: Locating transcription factor binding sites via interpretable dual-channel encoder-decoder structure

•A novel method (DeepUTF) to predict transcription factor binding sites (TFBSs).•DeepUTF captures other relevant patterns in the transcriptional regulatory network.•The feature learning process of the model is interpretable.•Excellent model predictions compared to TF-DNA complexes in the PDB.•DeepUT...

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Vydané v:	Pattern recognition Ročník 161; s. 111279
Hlavní autori:	Ding, Pengju, Wang, Jianxin, He, Shiyue, Gao, Xin, Yu, Xu, Yu, Bin
Médium:	Journal Article
Jazyk:	English
Vydavateľské údaje:	Elsevier Ltd 01.05.2025
Predmet:	Improved encoder-decoder Interpretability Swin transformer Transcription factor binding sites Swin transformer Transcription factor binding sites Improved encoder-decoder Interpretability
ISSN:	0031-3203
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