CRN++: Molecular programming language

Synthetic biology is a rapidly emerging research area, with expected wide-ranging impact in biology, nanofabrication, and medicine. A key technical challenge lies in embedding computation in molecular contexts where electronic micro-controllers cannot be inserted. This necessitates effective represe...

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Vydáno v:Natural computing Ročník 19; číslo 2; s. 391 - 407
Hlavní autoři: Vasić, Marko, Soloveichik, David, Khurshid, Sarfraz
Médium: Journal Article
Jazyk:angličtina
Vydáno: Dordrecht Springer Netherlands 01.06.2020
Springer Nature B.V
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ISSN:1567-7818, 1572-9796
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Abstract Synthetic biology is a rapidly emerging research area, with expected wide-ranging impact in biology, nanofabrication, and medicine. A key technical challenge lies in embedding computation in molecular contexts where electronic micro-controllers cannot be inserted. This necessitates effective representation of computation using molecular components. While previous work established the Turing-completeness of chemical reactions, defining representations that are faithful, efficient, and practical remains challenging . This paper introduces CRN ++, a new language for programming deterministic (mass-action) chemical kinetics to perform computation. We present its syntax and semantics, and build a compiler translating CRN ++ programs into chemical reactions, thereby laying the foundation of a comprehensive framework for molecular programming. Our language addresses the key challenge of embedding familiar imperative constructs into a set of chemical reactions happening simultaneously and manipulating real-valued concentrations. Although some deviation from ideal output value cannot be avoided, we develop methods to minimize the error, and implement error analysis tools. We demonstrate the feasibility of using CRN ++on a suite of well-known algorithms for discrete and real-valued computation. CRN ++ can be easily extended to support new commands or chemical reaction implementations, and thus provides a foundation for developing more robust and practical molecular programs.
AbstractList Synthetic biology is a rapidly emerging research area, with expected wide-ranging impact in biology, nanofabrication, and medicine. A key technical challenge lies in embedding computation in molecular contexts where electronic micro-controllers cannot be inserted. This necessitates effective representation of computation using molecular components. While previous work established the Turing-completeness of chemical reactions, defining representations that are faithful, efficient, and practical remains challenging . This paper introduces CRN ++, a new language for programming deterministic (mass-action) chemical kinetics to perform computation. We present its syntax and semantics, and build a compiler translating CRN ++ programs into chemical reactions, thereby laying the foundation of a comprehensive framework for molecular programming. Our language addresses the key challenge of embedding familiar imperative constructs into a set of chemical reactions happening simultaneously and manipulating real-valued concentrations. Although some deviation from ideal output value cannot be avoided, we develop methods to minimize the error, and implement error analysis tools. We demonstrate the feasibility of using CRN ++on a suite of well-known algorithms for discrete and real-valued computation. CRN ++ can be easily extended to support new commands or chemical reaction implementations, and thus provides a foundation for developing more robust and practical molecular programs.
Synthetic biology is a rapidly emerging research area, with expected wide-ranging impact in biology, nanofabrication, and medicine. A key technical challenge lies in embedding computation in molecular contexts where electronic micro-controllers cannot be inserted. This necessitates effective representation of computation using molecular components. While previous work established the Turing-completeness of chemical reactions, defining representations that are faithful, efficient, and practical remains challenging . This paper introduces CRN++, a new language for programming deterministic (mass-action) chemical kinetics to perform computation. We present its syntax and semantics, and build a compiler translating CRN++ programs into chemical reactions, thereby laying the foundation of a comprehensive framework for molecular programming. Our language addresses the key challenge of embedding familiar imperative constructs into a set of chemical reactions happening simultaneously and manipulating real-valued concentrations. Although some deviation from ideal output value cannot be avoided, we develop methods to minimize the error, and implement error analysis tools. We demonstrate the feasibility of using CRN++on a suite of well-known algorithms for discrete and real-valued computation. CRN++ can be easily extended to support new commands or chemical reaction implementations, and thus provides a foundation for developing more robust and practical molecular programs.
Author Vasić, Marko
Soloveichik, David
Khurshid, Sarfraz
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Cites_doi 10.1109/TMBMC.2016.2640287
10.1007/978-3-319-67471-1_7
10.1038/s41598-018-26709-6
10.1073/pnas.0909380107
10.1038/srep00656
10.1145/3127496
10.1103/PhysRevLett.78.1190
10.1016/j.ymeth.2014.01.015
10.1371/journal.pone.0021414
10.1073/pnas.89.1.383
10.1162/artl.2009.15.1.15101
10.1093/synbio/ysx002
10.1021/acssynbio.5b00163
10.1038/nnano.2013.189
10.1073/pnas.88.24.10983
10.1145/2024724.2024911
10.1145/2429384.2429462
10.1007/3-540-59496-5_343
10.1109/INFCOM.2009.5062181
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References Cardelli, Csikász-Nagy (CR4) 2012; 2
Fages, Le Guludec, Bournez, Pouly (CR9) 2017
Salehi, Parhi, Riedel (CR19) 2017; 6
Buisman, ten Eikelder, Hilbers, Liekens (CR3) 2009; 15
CR8
Chen, Dalchau, Srinivas, Phillips, Cardelli, Soloveichik, Seelig (CR5) 2013; 8
CR7
Soloveichik, Seelig, Winfree (CR21) 2010; 107
CR17
Magnasco (CR16) 1997; 78
Ge, Zhong, Wen, You, Zhang (CR10) 2016; 3
CR15
Hjelmfelt, Weinberger, Ross (CR12) 1992; 89
CR14
Baccouche, Montagne, Padirac, Fujii, Rondelez (CR1) 2014; 67
CR13
Chou (CR6) 2017; 2
Salehi, Liu, Riedel, Parhi (CR18) 2018; 8
Senum, Riedel (CR20) 2011; 6
Bournez, Graça, Pouly (CR2) 2017; 64
Hjelmfelt, Weinberger, Ross (CR11) 1991; 88
A Hjelmfelt (9775_CR12) 1992; 89
SA Salehi (9775_CR18) 2018; 8
HJ Buisman (9775_CR3) 2009; 15
MO Magnasco (9775_CR16) 1997; 78
YJ Chen (9775_CR5) 2013; 8
9775_CR17
9775_CR15
9775_CR14
9775_CR13
9775_CR8
9775_CR7
D Soloveichik (9775_CR21) 2010; 107
A Baccouche (9775_CR1) 2014; 67
L Cardelli (9775_CR4) 2012; 2
François Fages (9775_CR9) 2017
O Bournez (9775_CR2) 2017; 64
A Hjelmfelt (9775_CR11) 1991; 88
CT Chou (9775_CR6) 2017; 2
SA Salehi (9775_CR19) 2017; 6
P Senum (9775_CR20) 2011; 6
L Ge (9775_CR10) 2016; 3
References_xml – volume: 3
  start-page: 33
  issue: 1
  year: 2016
  end-page: 47
  ident: CR10
  article-title: A formal combinational logic synthesis with chemical reaction networks
  publication-title: IEEE Trans Mol Biol Multi-Scale Commun
  doi: 10.1109/TMBMC.2016.2640287
– start-page: 108
  year: 2017
  end-page: 127
  ident: CR9
  article-title: Strong Turing Completeness of Continuous Chemical Reaction Networks and Compilation of Mixed Analog-Digital Programs
  publication-title: Computational Methods in Systems Biology
  doi: 10.1007/978-3-319-67471-1_7
– volume: 8
  start-page: 8312
  issue: 1
  year: 2018
  ident: CR18
  article-title: Computing mathematical functions using DNA via fractional coding
  publication-title: Sci Rep
  doi: 10.1038/s41598-018-26709-6
– volume: 107
  start-page: 5393
  issue: 12
  year: 2010
  end-page: 5398
  ident: CR21
  article-title: DNA as a universal substrate for chemical kinetics
  publication-title: Proc Nat Acad Sci
  doi: 10.1073/pnas.0909380107
– volume: 2
  start-page: 656
  year: 2012
  ident: CR4
  article-title: The cell cycle switch computes approximate majority
  publication-title: Sci Rep
  doi: 10.1038/srep00656
– ident: CR14
– ident: CR15
– volume: 64
  start-page: 38
  issue: 6
  year: 2017
  ident: CR2
  article-title: Polynomial time corresponds to solutions of polynomial ordinary differential equations of polynomial length
  publication-title: J ACM
  doi: 10.1145/3127496
– volume: 78
  start-page: 1190
  issue: 6
  year: 1997
  ident: CR16
  article-title: Chemical kinetics is Turing universal
  publication-title: Phys Rev Lett
  doi: 10.1103/PhysRevLett.78.1190
– ident: CR17
– volume: 67
  start-page: 234
  issue: 2
  year: 2014
  end-page: 249
  ident: CR1
  article-title: Dynamic DNA-toolbox reaction circuits: a walkthrough
  publication-title: Methods
  doi: 10.1016/j.ymeth.2014.01.015
– ident: CR13
– volume: 6
  start-page: e21414
  year: 2011
  ident: CR20
  article-title: Rate-independent constructs for chemical computation
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0021414
– volume: 89
  start-page: 383
  issue: 1
  year: 1992
  end-page: 387
  ident: CR12
  article-title: Chemical implementation of finite-state machines
  publication-title: Proc Nat Acad Sci
  doi: 10.1073/pnas.89.1.383
– volume: 15
  start-page: 5
  year: 2009
  end-page: 19
  ident: CR3
  article-title: Computing algebraic functions with biochemical reaction networks
  publication-title: Artif Life
  doi: 10.1162/artl.2009.15.1.15101
– volume: 2
  start-page: ysx002
  issue: 1
  year: 2017
  ident: CR6
  article-title: Chemical reaction networks for computing logarithm
  publication-title: Synth Biol
  doi: 10.1093/synbio/ysx002
– ident: CR7
– ident: CR8
– volume: 6
  start-page: 76
  issue: 1
  year: 2017
  end-page: 83
  ident: CR19
  article-title: Chemical reaction networks for computing polynomials
  publication-title: ACS Synth Biol
  doi: 10.1021/acssynbio.5b00163
– volume: 8
  start-page: 755
  issue: 10
  year: 2013
  ident: CR5
  article-title: Programmable chemical controllers made from DNA
  publication-title: Nat Nanotechnol
  doi: 10.1038/nnano.2013.189
– volume: 88
  start-page: 10983
  issue: 24
  year: 1991
  end-page: 10987
  ident: CR11
  article-title: Chemical implementation of neural networks and Turing machines
  publication-title: Proc Nat Acad Sci
  doi: 10.1073/pnas.88.24.10983
– volume: 67
  start-page: 234
  issue: 2
  year: 2014
  ident: 9775_CR1
  publication-title: Methods
  doi: 10.1016/j.ymeth.2014.01.015
– start-page: 108
  volume-title: Computational Methods in Systems Biology
  year: 2017
  ident: 9775_CR9
  doi: 10.1007/978-3-319-67471-1_7
– volume: 78
  start-page: 1190
  issue: 6
  year: 1997
  ident: 9775_CR16
  publication-title: Phys Rev Lett
  doi: 10.1103/PhysRevLett.78.1190
– volume: 88
  start-page: 10983
  issue: 24
  year: 1991
  ident: 9775_CR11
  publication-title: Proc Nat Acad Sci
  doi: 10.1073/pnas.88.24.10983
– ident: 9775_CR14
  doi: 10.1145/2024724.2024911
– volume: 8
  start-page: 755
  issue: 10
  year: 2013
  ident: 9775_CR5
  publication-title: Nat Nanotechnol
  doi: 10.1038/nnano.2013.189
– ident: 9775_CR13
  doi: 10.1145/2429384.2429462
– ident: 9775_CR15
  doi: 10.1007/3-540-59496-5_343
– volume: 89
  start-page: 383
  issue: 1
  year: 1992
  ident: 9775_CR12
  publication-title: Proc Nat Acad Sci
  doi: 10.1073/pnas.89.1.383
– volume: 2
  start-page: ysx002
  issue: 1
  year: 2017
  ident: 9775_CR6
  publication-title: Synth Biol
  doi: 10.1093/synbio/ysx002
– volume: 2
  start-page: 656
  year: 2012
  ident: 9775_CR4
  publication-title: Sci Rep
  doi: 10.1038/srep00656
– volume: 64
  start-page: 38
  issue: 6
  year: 2017
  ident: 9775_CR2
  publication-title: J ACM
  doi: 10.1145/3127496
– ident: 9775_CR8
– volume: 6
  start-page: 76
  issue: 1
  year: 2017
  ident: 9775_CR19
  publication-title: ACS Synth Biol
  doi: 10.1021/acssynbio.5b00163
– volume: 6
  start-page: e21414
  year: 2011
  ident: 9775_CR20
  publication-title: PLoS ONE
  doi: 10.1371/journal.pone.0021414
– ident: 9775_CR7
– volume: 8
  start-page: 8312
  issue: 1
  year: 2018
  ident: 9775_CR18
  publication-title: Sci Rep
  doi: 10.1038/s41598-018-26709-6
– volume: 3
  start-page: 33
  issue: 1
  year: 2016
  ident: 9775_CR10
  publication-title: IEEE Trans Mol Biol Multi-Scale Commun
  doi: 10.1109/TMBMC.2016.2640287
– volume: 107
  start-page: 5393
  issue: 12
  year: 2010
  ident: 9775_CR21
  publication-title: Proc Nat Acad Sci
  doi: 10.1073/pnas.0909380107
– volume: 15
  start-page: 5
  year: 2009
  ident: 9775_CR3
  publication-title: Artif Life
  doi: 10.1162/artl.2009.15.1.15101
– ident: 9775_CR17
  doi: 10.1109/INFCOM.2009.5062181
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SubjectTerms Algorithms
Artificial Intelligence
Biology
Chemical reactions
Complex Systems
Computation
Computer Science
Embedding
Error analysis
Evolutionary Biology
Microcontrollers
Nanofabrication
Processor Architectures
Programming languages
Reaction kinetics
Representations
Semantics
Theory of Computation
Translating
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Title CRN++: Molecular programming language
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